prot_M-pyrifera_M_contig127336.5504.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig127336.5504.1
Unique Nameprot_M-pyrifera_M_contig127336.5504.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length78
Homology
BLAST of mRNA_M-pyrifera_M_contig127336.5504.1 vs. uniprot
Match: A0A2E7KDF4_9PLAN (PadR family transcriptional regulator n=6 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KDF4_9PLAN)

HSP 1 Score: 149 bits (375), Expect = 6.850e-45
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0
Query:    1 MGQSTLYPLLYNLESQGLIRPSWQAAENVRKRKYYSLTAKGKKRLANDTAQWIAVTSAMQSLGILSGAQPKLQGGEA 77
            MGQSTLYPLLYNLESQGLIRPSWQAAEN RKRKYYSLTAKGKKRLANDTAQWIAVTSAMQSLGILSGAQPKLQGGEA
Sbjct:   44 MGQSTLYPLLYNLESQGLIRPSWQAAENGRKRKYYSLTAKGKKRLANDTAQWIAVTSAMQSLGILSGAQPKLQGGEA 120          
BLAST of mRNA_M-pyrifera_M_contig127336.5504.1 vs. uniprot
Match: A0A350K7U5_9PLAN (PadR family transcriptional regulator (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350K7U5_9PLAN)

HSP 1 Score: 134 bits (338), Expect = 9.270e-40
Identity = 68/77 (88.31%), Postives = 73/77 (94.81%), Query Frame = 0
Query:    1 MGQSTLYPLLYNLESQGLIRPSWQAAENVRKRKYYSLTAKGKKRLANDTAQWIAVTSAMQSLGILSGAQPKLQGGEA 77
            MGQSTLYPLLYNL+SQGLIRPSWQ +E+ RKRKYYSLTAKGKKRLA+DTAQW AVTSAMQSLGILSG QPKL+GGEA
Sbjct:    5 MGQSTLYPLLYNLQSQGLIRPSWQESESGRKRKYYSLTAKGKKRLASDTAQWGAVTSAMQSLGILSGTQPKLRGGEA 81          
BLAST of mRNA_M-pyrifera_M_contig127336.5504.1 vs. uniprot
Match: A6C2L2_9PLAN (Transcriptional regulator, PadR-like family protein n=5 Tax=Gimesia TaxID=1649453 RepID=A6C2L2_9PLAN)

HSP 1 Score: 134 bits (338), Expect = 2.980e-39
Identity = 68/77 (88.31%), Postives = 73/77 (94.81%), Query Frame = 0
Query:    1 MGQSTLYPLLYNLESQGLIRPSWQAAENVRKRKYYSLTAKGKKRLANDTAQWIAVTSAMQSLGILSGAQPKLQGGEA 77
            MGQSTLYPLLYNL+SQGLIRPSWQ +E+ RKRKYYSLTAKGKKRLA+DTAQW AVTSAMQSLGILSG QPKL+GGEA
Sbjct:   44 MGQSTLYPLLYNLQSQGLIRPSWQESESGRKRKYYSLTAKGKKRLASDTAQWGAVTSAMQSLGILSGTQPKLRGGEA 120          
BLAST of mRNA_M-pyrifera_M_contig127336.5504.1 vs. uniprot
Match: A0A517VNL7_9PLAN (Lineage-specific thermal regulator protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VNL7_9PLAN)

HSP 1 Score: 123 bits (309), Expect = 7.770e-35
Identity = 60/76 (78.95%), Postives = 70/76 (92.11%), Query Frame = 0
Query:    1 MGQSTLYPLLYNLESQGLIRPSWQAAENVRKRKYYSLTAKGKKRLANDTAQWIAVTSAMQSLGILSGAQPKLQGGE 76
            MGQSTLYPLLYNL+SQGLIRPSWQ +++ RKRKYYSLTAKGKKRLA+DTAQW+AV +AMQSLG+L  A P+L+GGE
Sbjct:   44 MGQSTLYPLLYNLQSQGLIRPSWQESDSGRKRKYYSLTAKGKKRLASDTAQWMAVATAMQSLGVLPTAPPRLRGGE 119          
BLAST of mRNA_M-pyrifera_M_contig127336.5504.1 vs. uniprot
Match: A0A3R7RXZ7_9BACT (PadR family transcriptional regulator n=1 Tax=Phycisphaera sp. TMED9 TaxID=1986611 RepID=A0A3R7RXZ7_9BACT)

HSP 1 Score: 90.5 bits (223), Expect = 9.280e-22
Identity = 44/67 (65.67%), Postives = 54/67 (80.60%), Query Frame = 0
Query:    1 MGQSTLYPLLYNLESQGLIRPSWQAAENVRKRKYYSLTAKGKKRLANDTAQWIAVTSAMQSLGILSG 67
            MGQSTLYPLLYNLE++GL+R   + AEN R RKYY++T KG+ RLA D  QW AVT AMQ+LG++SG
Sbjct:   44 MGQSTLYPLLYNLEAKGLVRSERRVAENGRTRKYYAITGKGETRLAXDXXQWQAVTDAMQTLGVVSG 110          
BLAST of mRNA_M-pyrifera_M_contig127336.5504.1 vs. uniprot
Match: A0A3B1DFS7_9ZZZZ (Transcriptional regulator, PadR family n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DFS7_9ZZZZ)

HSP 1 Score: 89.4 bits (220), Expect = 2.720e-21
Identity = 45/78 (57.69%), Postives = 57/78 (73.08%), Query Frame = 0
Query:    1 MGQSTLYPLLYNLESQGLIRPSWQAAENVRKRKYYSLTAKGKKRLANDTAQWIAVTSAMQSLGILSGAQP-KLQGGEA 77
            MGQSTLYPLLYNLE++GLI  SW+  +N R+RKYY LT KGKK+L  DT QW  +  AMQ++G+L+  +   L GG A
Sbjct:   44 MGQSTLYPLLYNLEAKGLIEASWRETDNGRERKYYRLTGKGKKKLKADTEQWNRLAGAMQAIGVLNSPKAGHLAGGSA 121          
BLAST of mRNA_M-pyrifera_M_contig127336.5504.1 vs. uniprot
Match: UPI00198C194E (Helix-turn-helix transcriptional regulator n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=UPI00198C194E)

HSP 1 Score: 89.0 bits (219), Expect = 3.960e-21
Identity = 44/72 (61.11%), Postives = 56/72 (77.78%), Query Frame = 0
Query:    1 MGQSTLYPLLYNLESQGLIRPSWQAAENVRKRKYYSLTAKGKKRLANDTAQWIAVTSAMQSLGILSGAQPKL 72
            MGQSTLYPLLYNLE++GLI+  W AAE+ R+R+YYSLT KG+KRL  D  +W A+ SAM +LGI+S  +  L
Sbjct:   44 MGQSTLYPLLYNLEAKGLIQSRWLAAESGRERRYYSLTGKGRKRLKEDCERWSALASAMAALGIVSPGRATL 115          
BLAST of mRNA_M-pyrifera_M_contig127336.5504.1 vs. uniprot
Match: A0A7S6MET9_9BACT (Helix-turn-helix transcriptional regulator n=1 Tax=Phycisphaeraceae bacterium TaxID=2026777 RepID=A0A7S6MET9_9BACT)

HSP 1 Score: 89.0 bits (219), Expect = 4.410e-21
Identity = 44/67 (65.67%), Postives = 53/67 (79.10%), Query Frame = 0
Query:    1 MGQSTLYPLLYNLESQGLIRPSWQAAENVRKRKYYSLTAKGKKRLANDTAQWIAVTSAMQSLGILSG 67
            MGQSTLYPLLYNLE++ LI  SW+ A++ R RKYY+LTAKGKK LA +T QW  V  AM SLG+L+G
Sbjct:   44 MGQSTLYPLLYNLEAKRLIAGSWREADSGRPRKYYALTAKGKKHLAGETRQWRQVAQAMTSLGVLTG 110          
BLAST of mRNA_M-pyrifera_M_contig127336.5504.1 vs. uniprot
Match: UPI001AD45397 (Uncharacterized protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=UPI001AD45397)

HSP 1 Score: 86.7 bits (213), Expect = 2.740e-20
Identity = 40/65 (61.54%), Postives = 53/65 (81.54%), Query Frame = 0
Query:    1 MGQSTLYPLLYNLESQGLIRPSWQAAENVRKRKYYSLTAKGKKRLANDTAQWIAVTSAMQSLGIL 65
            MGQSTLYPLLYNLE++G I  +W+ AE+ R+RKYY LTA G+KRLA++TAQW  +  AM+ +G+L
Sbjct:   44 MGQSTLYPLLYNLEAKGFIEGAWEKAESGRERKYYRLTATGRKRLADETAQWQRLAGAMKEIGVL 108          
BLAST of mRNA_M-pyrifera_M_contig127336.5504.1 vs. uniprot
Match: A0A2D5E5I5_9BACT (PadR family transcriptional regulator n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2D5E5I5_9BACT)

HSP 1 Score: 86.7 bits (213), Expect = 3.060e-20
Identity = 43/72 (59.72%), Postives = 54/72 (75.00%), Query Frame = 0
Query:    1 MGQSTLYPLLYNLESQGLIRPSWQAAENVRKRKYYSLTAKGKKRLANDTAQWIAVTSAMQSLGILSGAQPKL 72
            MGQSTLYPLLYNLE++G ++   + AEN R+RKYY LT  G++RL  D AQW AVT AMQSLG+++G    L
Sbjct:   44 MGQSTLYPLLYNLEAKGHVQSERRRAENGRERKYYGLTGAGRRRLKEDGAQWQAVTGAMQSLGVVNGRMGSL 115          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig127336.5504.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7KDF4_9PLAN6.850e-4598.70PadR family transcriptional regulator n=6 Tax=Gime... [more]
A0A350K7U5_9PLAN9.270e-4088.31PadR family transcriptional regulator (Fragment) n... [more]
A6C2L2_9PLAN2.980e-3988.31Transcriptional regulator, PadR-like family protei... [more]
A0A517VNL7_9PLAN7.770e-3578.95Lineage-specific thermal regulator protein n=1 Tax... [more]
A0A3R7RXZ7_9BACT9.280e-2265.67PadR family transcriptional regulator n=1 Tax=Phyc... [more]
A0A3B1DFS7_9ZZZZ2.720e-2157.69Transcriptional regulator, PadR family n=1 Tax=hyd... [more]
UPI00198C194E3.960e-2161.11Helix-turn-helix transcriptional regulator n=1 Tax... [more]
A0A7S6MET9_9BACT4.410e-2165.67Helix-turn-helix transcriptional regulator n=1 Tax... [more]
UPI001AD453972.740e-2061.54Uncharacterized protein n=1 Tax=Phycisphaerales ba... [more]
A0A2D5E5I5_9BACT3.060e-2059.72PadR family transcriptional regulator n=1 Tax=Phyc... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005149Transcription regulator PadR, N-terminalPFAMPF03551PadRcoord: 2..46
e-value: 4.5E-12
score: 45.8
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..72
e-value: 1.4E-18
score: 68.4
NoneNo IPR availablePANTHERPTHR33169FAMILY NOT NAMEDcoord: 2..61
NoneNo IPR availablePANTHERPTHR33169:SF14coord: 2..61
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 2..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig127336contigM-pyrifera_M_contig127336:33..266 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig127336.5504.1mRNA_M-pyrifera_M_contig127336.5504.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig127336 3..505 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig127336.5504.1 ID=prot_M-pyrifera_M_contig127336.5504.1|Name=mRNA_M-pyrifera_M_contig127336.5504.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=78bp
MGQSTLYPLLYNLESQGLIRPSWQAAENVRKRKYYSLTAKGKKRLANDTA
QWIAVTSAMQSLGILSGAQPKLQGGEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005149Tscrpt_reg_PadR_N
IPR036388WH-like_DNA-bd_sf
IPR036390WH_DNA-bd_sf