prot_M-pyrifera_M_contig12647.5336.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12647.5336.1
Unique Nameprot_M-pyrifera_M_contig12647.5336.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length197
Homology
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BLAST of mRNA_M-pyrifera_M_contig12647.5336.1 vs. uniprot
Match: A0A6H5KHR5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHR5_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 2.080e-54
Identity = 99/172 (57.56%), Postives = 109/172 (63.37%), Query Frame = 0 
Query:   18 VCPGVSTPRPLGRHAHAAAYIESKVDSVNALFVFGGRENAEELAPLGDLWMFDFTVMRWAEVTPAS-KNAPANRFEHSLTVSSTLEKNAFHGWRLILDSYTFYTSNYFHIRGVTILSYFQGFSWGRVWKGGAGDGVASLVVFGGETIGRTGQAIYMNDVWLYTPHIGQWREV 188
            VCPGVST RPLGRHAHA+AYIESK D++NALF+FGGREN +EL PLGDLWMFDFT MRW E+TP S K AP NRF HSLTV                                              W+GG GDGVASLVVFGGETI RTGQ ++MNDVWLYTP  G WR+V
Sbjct:  436 VCPGVSTSRPLGRHAHASAYIESKTDNMNALFIFGGRENMDELTPLGDLWMFDFTTMRWREITPDSNKPAPCNRFYHSLTV----------------------------------------------WQGGVGDGVASLVVFGGETITRTGQTVFMNDVWLYTPQTGAWRQV 561
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BLAST of mRNA_M-pyrifera_M_contig12647.5336.1 vs. uniprot
Match: D7G1X6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1X6_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 4.700e-49
Identity = 89/166 (53.61%), Postives = 100/166 (60.24%), Query Frame = 0 
Query:   27 PLGRHAHAAAYIESKVDSVNALFVFGGRENAEELAPLGDLWMFDFTVMRWAEVTPASKN-APANRFEHSLTVSSTLEKNAFHGWRLILDSYTFYTSNYFHIRGVTILSYFQGFSWGRVWKGGAGDGVASLVVFGGETIGRTGQAIYMNDVWLYTPHIGQWREVRCG 191
            P  RH HA+AYIESK D++NALF+FGGREN ++L PLGDLWMFDFT MRW+E+TP SK  AP NRF HSLTV                                              W+GG GDGVASLVVFGGETI RTGQ ++MNDVWLYTP  G WREVR  
Sbjct:  295 PALRHGHASAYIESKTDNMNALFIFGGRENMDDLTPLGDLWMFDFTTMRWSEITPDSKKPAPCNRFYHSLTV----------------------------------------------WQGGVGDGVASLVVFGGETITRTGQTVFMNDVWLYTPQTGAWREVRSS 414
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12647.5336.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KHR5_9PHAE2.080e-5457.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1X6_ECTSI4.700e-4953.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 6..106
e-value: 3.9E-6
score: 28.1
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 24..192
NoneNo IPR availablePANTHERPTHR23244KELCH REPEAT DOMAINcoord: 16..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12647contigM-pyrifera_M_contig12647:403..2827 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12647.5336.1mRNA_M-pyrifera_M_contig12647.5336.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12647 403..2827 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12647.5336.1 ID=prot_M-pyrifera_M_contig12647.5336.1|Name=mRNA_M-pyrifera_M_contig12647.5336.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=197bp
SSSSSSSSSSSSPEPVVVCPGVSTPRPLGRHAHAAAYIESKVDSVNALFV
FGGRENAEELAPLGDLWMFDFTVMRWAEVTPASKNAPANRFEHSLTVSST
LEKNAFHGWRLILDSYTFYTSNYFHIRGVTILSYFQGFSWGRVWKGGAGD
GVASLVVFGGETIGRTGQAIYMNDVWLYTPHIGQWREVRCGPTFDQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015915Kelch-typ_b-propeller