prot_M-pyrifera_M_contig125225.5102.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig125225.5102.1
Unique Nameprot_M-pyrifera_M_contig125225.5102.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length171
Homology
BLAST of mRNA_M-pyrifera_M_contig125225.5102.1 vs. uniprot
Match: A0A7S4HUM3_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HUM3_9EUKA)

HSP 1 Score: 247 bits (631), Expect = 1.590e-78
Identity = 124/171 (72.51%), Postives = 147/171 (85.96%), Query Frame = 0
Query:    1 NVNHRRFAVCSALAASALPSLVFARGHKISNVTEVPLVFSDAAVAGVEKTKAAVALLKAVGAYDDVVASKDSKKIRAGKGKLRNRRYVQRRGPLVIYDEAGPITNAMRNLPGVELCQVSRLNLLQLAPGGHVGRFVIWTESAFKKLDSLYGTYRRGAEEKVGFRLPRAKMA 171
            N+N +R AVCSALAASALPSLV ARGH I NV EVPLV S+ AV+G+EKT AAV LL+A+ AYDDV  SKDS+KIRAGKGK RNRRYVQ  GPLV+YDE+GP+T A RNLPGVE CQVSRLNLL+LAPGGH+GRF+IWTE AFK+LDS++GT +  +E+K G+++PRAKMA
Sbjct:  121 NLNQKRMAVCSALAASALPSLVMARGHSIENVPEVPLVISNDAVSGLEKTSAAVKLLQAISAYDDVQKSKDSRKIRAGKGKRRNRRYVQHVGPLVVYDESGPLTRAFRNLPGVETCQVSRLNLLRLAPGGHLGRFIIWTEGAFKQLDSVFGTVKAVSEQKRGYKVPRAKMA 291          
BLAST of mRNA_M-pyrifera_M_contig125225.5102.1 vs. uniprot
Match: A0A1J3JVM7_NOCCA (60S ribosomal protein L4-1 (Fragment) n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3JVM7_NOCCA)

HSP 1 Score: 225 bits (573), Expect = 3.370e-70
Identity = 113/170 (66.47%), Postives = 140/170 (82.35%), Query Frame = 0
Query:    1 NVNHRRFAVCSALAASALPSLVFARGHKISNVTEVPLVFSDAAVAGVEKTKAAVALLKAVGAYDDVVASKDSKKIRAGKGKLRNRRYVQRRGPLVIYDEAGPITNAMRNLPGVELCQVSRLNLLQLAPGGHVGRFVIWTESAFKKLDSLYGTYRRGAEEKVGFRLPRAKM 170
            N+N RR AVCSALAASALPSLV ARGHK+++V EVPLV S+ ++  V+KTK AV +LK +GAYDDV   KDS+ +RAGKGK+RNRR+VQRRGPLVIYDE   +  A RN+PGVEL  V++LNLLQLAPGGH+GRF IWT++AF +LDSL+GT+ + + EK GF LPR+KM
Sbjct:   91 NLNQRRIAVCSALAASALPSLVIARGHKVNSVPEVPLVVSNESIVNVDKTKFAVKVLKNLGAYDDVEHVKDSRHVRAGKGKMRNRRFVQRRGPLVIYDEKSSLVQAFRNIPGVELVSVNQLNLLQLAPGGHLGRFCIWTKAAFDRLDSLFGTFTKRSTEKKGFVLPRSKM 260          
BLAST of mRNA_M-pyrifera_M_contig125225.5102.1 vs. uniprot
Match: L8HIT8_ACACA (Ribosomal protein L4/L1 family n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HIT8_ACACA)

HSP 1 Score: 223 bits (568), Expect = 4.420e-69
Identity = 114/170 (67.06%), Postives = 135/170 (79.41%), Query Frame = 0
Query:    1 NVNHRRFAVCSALAASALPSLVFARGHKISNVTEVPLVFSDAAVAGVEKTKAAVALLKAVGAYDDVVASKDSKKIRAGKGKLRNRRYVQRRGPLVIYDEAGPITNAMRNLPGVELCQVSRLNLLQLAPGGHVGRFVIWTESAFKKLDSLYGTYRRGAEEKVGFRLPRAKM 170
            NVN +RFA+CSALAASA+P+LV ARGHKIS + EVPLV +  AV  V KTK AVALLK + AY+DV   KDS+KIR G GK+RNRR VQRRGPLVIYD+  P+  A RN+PGVELC V R+NLLQLAPGGH+GRFVIWT+ AF+KLD++YGTY + + EK  F LPR  M
Sbjct:  100 NVNQKRFALCSALAASAVPALVMARGHKISQIPEVPLVVATEAVKDVTKTKHAVALLKKLNAYEDVEKVKDSRKIRRGVGKMRNRRRVQRRGPLVIYDQKSPLVFAFRNIPGVELCSVERMNLLQLAPGGHLGRFVIWTKDAFEKLDAIYGTYTKKSTEKTHFTLPRPLM 269          
BLAST of mRNA_M-pyrifera_M_contig125225.5102.1 vs. uniprot
Match: A0A7S4NSS4_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4NSS4_9EUKA)

HSP 1 Score: 221 bits (564), Expect = 2.380e-68
Identity = 113/171 (66.08%), Postives = 136/171 (79.53%), Query Frame = 0
Query:    1 NVNHRRFAVCSALAASALPSLVFARGHKISNVTEVPLVFSDAAVAGVEKTKAAVALLKAVGAYDDVVASKDSKKIRAGKGKLRNRRYVQRRGPLVIYDEAGPITNAMRNLPGVELCQVSRLNLLQLAPGGHVGRFVIWTESAFKKLDSLYGTYRRGAEEKVGFRLPRAKMA 171
            N+N RR AVCSALAASALPSLV ARGH++  + EVPLV S+ ++  V+KTK A+ +L+ +GAY DV   KDSK++RAGKGKLRNRRYVQRRGPLVIY+E   +  A RNLPGVEL  V RLNLLQLAPGGH+GRF IWT+SAF KLDS++GT+   +  K GF LPR+KMA
Sbjct:  121 NLNQRRIAVCSALAASALPSLVMARGHRVEQIQEVPLVVSNDSIKNVDKTKFAIKVLQTLGAYADVEKVKDSKQVRAGKGKLRNRRYVQRRGPLVIYNEKSAMLRAFRNLPGVELVSVDRLNLLQLAPGGHLGRFCIWTQSAFNKLDSIFGTFASPSTVKKGFVLPRSKMA 291          
BLAST of mRNA_M-pyrifera_M_contig125225.5102.1 vs. uniprot
Match: T2MGG1_HYDVU (60S ribosomal protein L4 n=1 Tax=Hydra vulgaris TaxID=6087 RepID=T2MGG1_HYDVU)

HSP 1 Score: 217 bits (552), Expect = 8.360e-67
Identity = 111/170 (65.29%), Postives = 137/170 (80.59%), Query Frame = 0
Query:    1 NVNHRRFAVCSALAASALPSLVFARGHKISNVTEVPLVFSDAAVAGVEKTKAAVALLKAVGAYDDVVASKDSKKIRAGKGKLRNRRYVQRRGPLVIYDEAGPITNAMRNLPGVELCQVSRLNLLQLAPGGHVGRFVIWTESAFKKLDSLYGTYRRGAEEKVGFRLPRAKM 170
            N N RR+AVCSALAA+ALP+LV ARGHKI N+TEVP+V S+  +  + KTKAAV  LK + AY+DV   +DSKKIRAGKGK+RNRRY  RRGPLV++ E   I  A RNLPGV+L QV RLNLL+L PGGH+GRFVIW+ESAF++LDS++GT+R+ + EKV + LPRAKM
Sbjct:  115 NQNQRRYAVCSALAATALPALVMARGHKIENLTEVPVVCSNN-IENLTKTKAAVQFLKKINAYEDVQKCQDSKKIRAGKGKMRNRRYTMRRGPLVVFKEDHGIKQAFRNLPGVDLIQVDRLNLLKLCPGGHLGRFVIWSESAFERLDSIFGTWRKPSSEKVNYSLPRAKM 283          
BLAST of mRNA_M-pyrifera_M_contig125225.5102.1 vs. uniprot
Match: A0A1J3DL11_NOCCA (60S ribosomal protein L4-2 (Fragment) n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3DL11_NOCCA)

HSP 1 Score: 213 bits (541), Expect = 3.230e-66
Identity = 110/169 (65.09%), Postives = 133/169 (78.70%), Query Frame = 0
Query:    1 NVNHRRFAVCSALAASALPSLVFARGHKISNVTEVPLVFSDAAVAGVEKTKAAVALLKAVGAYDDVVASKDSKKIRAGKGKLRNRRYVQRRGPLVIYDEAGPITNAMRNLPGVELCQVSRLNLLQLAPGGHVGRFVIWTESAFKKLDSLYGTYRRGAEEKVGFRLPRAK 169
            N+  +R A+ SALAASALPSLV ARGH I  V EVPLV +++AV+G+EKT  AVALLK V A+DDV  SK+S+ IRAGKGK RNRRYVQ  GPLVIYDEAGP+  A RNLPGVEL QV+RLNLLQLAPGGH+GRF+IWT  AF++LD +YGT++  +  K  ++   AK
Sbjct:  121 NLTQKRLAITSALAASALPSLVLARGHSIDQVPEVPLVLANSAVSGLEKTSKAVALLKTVKAFDDVEKSKESRHIRAGKGKRRNRRYVQHVGPLVIYDEAGPLVQAFRNLPGVELVQVTRLNLLQLAPGGHLGRFIIWTAGAFERLDEIYGTWKAPSTLKKDYKFGAAK 289          
BLAST of mRNA_M-pyrifera_M_contig125225.5102.1 vs. uniprot
Match: A0A316YRI4_9BASI (60S ribosomal protein L4/L1/L2 n=1 Tax=Acaromyces ingoldii TaxID=215250 RepID=A0A316YRI4_9BASI)

HSP 1 Score: 215 bits (548), Expect = 3.440e-66
Identity = 113/171 (66.08%), Postives = 137/171 (80.12%), Query Frame = 0
Query:    1 NVNHRRFAVCSALAASALPSLVFARGHKISNVTEVPLVFSDAAVAGVEKTKAAVALLKAVGAYDDVVASKDSKKIRAGKGKLRNRRYVQRRGPLVIYDEAGPITNAMRNLPGVELCQVSRLNLLQLAPGGHVGRFVIWTESAFKKLDSLYGTYRRGAEEKVGFRLPRAKMA 171
            N N +RFA  SALAA+A+PSL+ ARGH++  + EVPLV SDAA    +KTK A+ALL+AV AY DVV   +S+K+RAG+GKLRNRRY QRRGPLV+Y+E   I  A RNLPGVEL  V RLNLLQLAPGGHVGRF IWTESAFK+LD+++GT+ + +EEK GFRLP AK+A
Sbjct:  115 NQNQKRFATASALAATAIPSLLLARGHRVEQLEEVPLVISDAAQ-DFKKTKEALALLQAVNAYPDVVKVSNSRKVRAGQGKLRNRRYKQRRGPLVVYNEDNGIVKAFRNLPGVELVSVHRLNLLQLAPGGHVGRFCIWTESAFKQLDTVFGTHDKPSEEKKGFRLPTAKIA 284          
BLAST of mRNA_M-pyrifera_M_contig125225.5102.1 vs. uniprot
Match: UPI001CFA29C6 (60S ribosomal protein L4-like isoform X2 n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFA29C6)

HSP 1 Score: 214 bits (546), Expect = 1.310e-65
Identity = 109/171 (63.74%), Postives = 138/171 (80.70%), Query Frame = 0
Query:    1 NVNHRRFAVCSALAASALPSLVFARGHKISNVTEVPLVFSDAAVAGVEKTKAAVALLKAVGAYDDVVASKDSKKIRAGKGKLRNRRYVQRRGPLVIYD-EAGPITNAMRNLPGVELCQVSRLNLLQLAPGGHVGRFVIWTESAFKKLDSLYGTYRRGAEEKVGFRLPRAKM 170
            NVN +R+AV SA+AASA+PSLV ARGHKI  V E+PLV SD+ V GVEKT AA+ +LK +GAYDD   +KDS+ IR GKGK+RNRRY+ R+GPLV+Y  E   +  A RN+PGV++  V RLNLL+LAPGGH+GRFVIWT+SA +KLDS+YGT+ +G+E+K G+ LPRAKM
Sbjct:  120 NVNQKRYAVVSAIAASAIPSLVMARGHKIEKVPELPLVVSDS-VEGVEKTSAALKVLKQIGAYDDADKAKDSQSIRPGKGKMRNRRYISRKGPLVVYSTEGAKLVKAFRNIPGVDVVNVERLNLLKLAPGGHLGRFVIWTKSAIEKLDSIYGTFDKGSEKKKGYVLPRAKM 289          
BLAST of mRNA_M-pyrifera_M_contig125225.5102.1 vs. uniprot
Match: A0A7M5X9R0_9CNID (Ribos_L4_asso_C domain-containing protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5X9R0_9CNID)

HSP 1 Score: 213 bits (542), Expect = 1.820e-65
Identity = 110/171 (64.33%), Postives = 131/171 (76.61%), Query Frame = 0
Query:    1 NVNHRRFAVCSALAASALPSLVFARGHKISNVTEVPLVFSDAAVAGVEKTKAAVALLKAVGAYDDVVASKDSKKIRAGKGKLRNRRYVQRRGPLVIYDEAGPITNAMRNLPGVELCQVSRLNLLQLAPGGHVGRFVIWTESAFKKLDSLYGTYRRGAEEKVGFRLPRAKMA 171
            N N RR+AVCSA+AASALP LV ARGHKI  + EVP+V S+A +    KTK+AVALLK + AYDDV   +DSKK+RAGKGK+RNRRY  RRGPLV+Y+E   I  A RNLPGVE   V RLNLL+L PGGH+GR  IW+E AFKKLDS+YGT+R+ + +K  F LPR KMA
Sbjct:  114 NQNQRRYAVCSAVAASALPPLVMARGHKIDGIPEVPVVCSNA-IESFTKTKSAVALLKKINAYDDVQKCQDSKKVRAGKGKMRNRRYTMRRGPLVVYNEDHGIQQAFRNLPGVETISVDRLNLLKLCPGGHLGRLCIWSEGAFKKLDSIYGTWRKPSTQKTNFNLPRHKMA 283          
BLAST of mRNA_M-pyrifera_M_contig125225.5102.1 vs. uniprot
Match: A0A1J3CMN5_NOCCA (60S ribosomal protein L4-B (Fragment) n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3CMN5_NOCCA)

HSP 1 Score: 211 bits (536), Expect = 2.200e-65
Identity = 110/170 (64.71%), Postives = 136/170 (80.00%), Query Frame = 0
Query:    1 NVNHRRFAVCSALAASALPSLVFARGHKISNVTEVPLVFSDAAVAGVEKTKAAVALLKAVGAYDDVVASKDSKKIRAGKGKLRNRRYVQRRGPLVIYDEAGPITNAMRNLPGVELCQVSRLNLLQLAPGGHVGRFVIWTESAFKKLDSLYGTYRRGAEEKVGFRLPRAKM 170
            N N +R+AV SALAASALPSLV ARGHKI+ + EVPLV  DAA  G++KTK A+A LKAVGAY DV   K S+K+RAGKGK+RNRR+VQR GPLV+Y+E   IT A RNLPGV+L QV RLNLLQLAPGGHVGRF++WT+SAF +L+ +YG   R +++K G++LP+  M
Sbjct:   75 NTNQKRYAVASALAASALPSLVLARGHKIAELPEVPLVV-DAATEGLQKTKQAIAALKAVGAYADVEKVKASRKLRAGKGKMRNRRHVQRLGPLVVYNEDKGITKAFRNLPGVDLAQVERLNLLQLAPGGHVGRFIVWTKSAFDRLNDIYGGVDRESKQKTGYKLPQNIM 243          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125225.5102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4HUM3_9EUKA1.590e-7872.51Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A1J3JVM7_NOCCA3.370e-7066.4760S ribosomal protein L4-1 (Fragment) n=2 Tax=Nocc... [more]
L8HIT8_ACACA4.420e-6967.06Ribosomal protein L4/L1 family n=1 Tax=Acanthamoeb... [more]
A0A7S4NSS4_9EUKA2.380e-6866.08Hypothetical protein (Fragment) n=1 Tax=Paramoeba ... [more]
T2MGG1_HYDVU8.360e-6765.2960S ribosomal protein L4 n=1 Tax=Hydra vulgaris Ta... [more]
A0A1J3DL11_NOCCA3.230e-6665.0960S ribosomal protein L4-2 (Fragment) n=2 Tax=Nocc... [more]
A0A316YRI4_9BASI3.440e-6666.0860S ribosomal protein L4/L1/L2 n=1 Tax=Acaromyces ... [more]
UPI001CFA29C61.310e-6563.7460S ribosomal protein L4-like isoform X2 n=1 Tax=M... [more]
A0A7M5X9R0_9CNID1.820e-6564.33Ribos_L4_asso_C domain-containing protein n=1 Tax=... [more]
A0A1J3CMN5_NOCCA2.200e-6564.7160S ribosomal protein L4-B (Fragment) n=2 Tax=Nocc... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023574Ribosomal protein L4 domain superfamilyGENE3D3.40.1370.10coord: 1..171
e-value: 1.1E-66
score: 226.9
IPR023574Ribosomal protein L4 domain superfamilySUPERFAMILY52166Ribosomal protein L4coord: 1..148
IPR002136Ribosomal protein L4/L1ePFAMPF00573Ribosomal_L4coord: 3..147
e-value: 7.9E-19
score: 68.1
NoneNo IPR availablePANTHERPTHR1943160S RIBOSOMAL PROTEIN L4coord: 1..171
NoneNo IPR availablePANTHERPTHR19431:SF060S RIBOSOMAL PROTEIN L4coord: 1..171
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..171
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..24
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..24
score: 0.508
IPR013000Ribosomal protein L4/L1e, eukaryotic/archaeal, conserved sitePROSITEPS00939RIBOSOMAL_L1Ecoord: 1..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig125225contigM-pyrifera_M_contig125225:1..513 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig125225.5102.1mRNA_M-pyrifera_M_contig125225.5102.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig125225 1..513 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig125225.5102.1 ID=prot_M-pyrifera_M_contig125225.5102.1|Name=mRNA_M-pyrifera_M_contig125225.5102.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=171bp
NVNHRRFAVCSALAASALPSLVFARGHKISNVTEVPLVFSDAAVAGVEKT
KAAVALLKAVGAYDDVVASKDSKKIRAGKGKLRNRRYVQRRGPLVIYDEA
GPITNAMRNLPGVELCQVSRLNLLQLAPGGHVGRFVIWTESAFKKLDSLY
GTYRRGAEEKVGFRLPRAKMA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023574Ribosomal_L4_dom_sf
IPR002136Ribosomal_L4/L1e
IPR013000Ribosomal_L4/L1e_euk/arc_CS