prot_M-pyrifera_M_contig124893.5060.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig124893.5060.1
Unique Nameprot_M-pyrifera_M_contig124893.5060.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length139
Homology
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BLAST of mRNA_M-pyrifera_M_contig124893.5060.1 vs. uniprot
Match: A0A813QGZ8_9BILA (Hypothetical protein n=1 Tax=Didymodactylos carnosus TaxID=1234261 RepID=A0A813QGZ8_9BILA)

HSP 1 Score: 56.6 bits (135), Expect = 1.420e-6
Identity = 29/118 (24.58%), Postives = 59/118 (50.00%), Query Frame = 0 
Query:   18 MSSARFGKSNDLLAISGHDRRIRLLDRATASELASLTDEA-GSLLCLTTSPDGQLLAAAGETNHVRIWNLESGEIEVDVERFSRRINAVEFSPQSDLIAFGGDERVLMTYDLKTNEQR 134
            +SS  F  +   L  +G D R+R+          ++++   GS+  +   PDG+L+ A   +  VR++N++ G +E ++   + RIN + FSP   ++     +R    Y++   E++
Sbjct: 1917 ISSLYFSPNGSTLTSAGEDGRVRVWSSNIGQCQMTISEPTWGSVSSVVIHPDGELIVAGYHSGFVRLFNMQGGTVEYEINNHTARINRLAFSPSGKILITASGDRTCRLYNVAEIEKK 2034
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BLAST of mRNA_M-pyrifera_M_contig124893.5060.1 vs. uniprot
Match: A0A7C9PSA7_9CYAN (DnaJ domain-containing protein n=1 Tax=Oscillatoria sp. SIO1A7 TaxID=2607767 RepID=A0A7C9PSA7_9CYAN)

HSP 1 Score: 53.1 bits (126), Expect = 2.020e-5
Identity = 38/110 (34.55%), Postives = 61/110 (55.45%), Query Frame = 0 
Query:   14 DGRTMSSARFGKSNDLLAISGHDRRIRLLDRATASELASLTDEAGSLLCLTTSPDGQLLAAAGETNHVRIWNLESGEIEVDVERFSRRINAVEFSPQSDLIAFGG-DERV 122
            DG T ++    K   LL I   D   +LL R+     A +T+ A S+L LT SPDG +LA++     +++WN+++G+    +   SR + A+ FSP   +IA G  D+R+
Sbjct:  401 DGETFATGGLEK---LLRIRQSDNG-KLL-RSLPKNAALVTNNAASVLSLTISPDGNILASSSFQG-IKLWNIKTGQEINSLRGHSREVTAIAFSPDGKIIASGSADKRI 504
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BLAST of mRNA_M-pyrifera_M_contig124893.5060.1 vs. uniprot
Match: A0A7C4QLF4_9PLAN (Non-specific serine/threonine protein kinase n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=A0A7C4QLF4_9PLAN)

HSP 1 Score: 53.1 bits (126), Expect = 2.240e-5
Identity = 33/103 (32.04%), Postives = 50/103 (48.54%), Query Frame = 0 
Query:   40 RLLDRATASELASLTDEAGSLLCLTTSPDGQLLAAAGETNHVRIWNLESGEIEVDVERFSRRINAVEFSPQSDLIAFGGDER--VLMTYDLKTNEQ-RRLLGH 139
            RL+   + S      +    L  L  SPDG   A  G     RIWN E+GE+   ++     +++V FSP S L+A GGD+    +  +D+ T  + R + GH
Sbjct:  858 RLMHLCSQSSRTFKAEPPAPLDALAISPDGNWFATGGWDGAARIWNRETGEVRHVLQHGGLYVHSVAFSPDSRLLATGGDDPQGYVQVWDVATGRRLRTITGH 960
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BLAST of mRNA_M-pyrifera_M_contig124893.5060.1 vs. uniprot
Match: A0A4Q5ZNV5_9DELT (WD40 repeat domain-containing protein (Fragment) n=1 Tax=Myxococcaceae bacterium TaxID=2484252 RepID=A0A4Q5ZNV5_9DELT)

HSP 1 Score: 51.6 bits (122), Expect = 6.760e-5
Identity = 38/131 (29.01%), Postives = 66/131 (50.38%), Query Frame = 0 
Query:    4 DWSLNAEVDSDGRTMSSARFGKSND--LLAISGHDRRIRLLDRATASELASLTDEAGSLLCLTTSPDGQLLAAAGETNHVRIWNLESGEIEVDVERFSRRINAVEFSPQSDLIAFGGDERVLMTYDLKTNE 132
            DW  N+ V S   T ++     S D  LLA      R+R+L+  +   L  L+   GS+  +  SPDG+LLAAAG+ + + +W+L  G     ++  + ++ A+ F      +  GG +  + T+D+ T +
Sbjct:  311 DW--NSVVSSAEGTEATVSLAVSPDRRLLAAGTLKGRVRVLEAGSGRPLLELSGVKGSVRAVAFSPDGKLLAAAGDPD-LHLWSLPEGTPAGRLQGHTGKLWALAFDGTGRRLVSGGADMTVRTWDVDTRQ 438
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124893.5060.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A813QGZ8_9BILA1.420e-624.58Hypothetical protein n=1 Tax=Didymodactylos carnos... [more]
A0A7C9PSA7_9CYAN2.020e-534.55DnaJ domain-containing protein n=1 Tax=Oscillatori... [more]
A0A7C4QLF4_9PLAN2.240e-532.04Non-specific serine/threonine protein kinase n=1 T... [more]
A0A4Q5ZNV5_9DELT6.760e-529.01WD40 repeat domain-containing protein (Fragment) n... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 4..43
e-value: 26.0
score: 8.0
coord: 88..127
e-value: 7.5
score: 11.5
coord: 46..85
e-value: 1.9E-4
score: 30.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 53..94
score: 11.244
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..139
e-value: 2.4E-24
score: 87.9
IPR024977Anaphase-promoting complex subunit 4, WD40 domainPFAMPF12894ANAPC4_WD40coord: 23..96
e-value: 1.9E-6
score: 28.1
NoneNo IPR availablePANTHERPTHR19848:SF4E3 UBIQUITIN-PROTEIN LIGASE TRAF7coord: 5..137
NoneNo IPR availablePANTHERPTHR19848WD40 REPEAT PROTEINcoord: 5..137
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 11..136
score: 19.617
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 12..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig124893contigM-pyrifera_M_contig124893:83..499 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig124893.5060.1mRNA_M-pyrifera_M_contig124893.5060.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig124893 83..499 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig124893.5060.1 ID=prot_M-pyrifera_M_contig124893.5060.1|Name=mRNA_M-pyrifera_M_contig124893.5060.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=139bp
NTSDWSLNAEVDSDGRTMSSARFGKSNDLLAISGHDRRIRLLDRATASEL
ASLTDEAGSLLCLTTSPDGQLLAAAGETNHVRIWNLESGEIEVDVERFSR
RINAVEFSPQSDLIAFGGDERVLMTYDLKTNEQRRLLGH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR024977Apc4_WD40_dom
IPR017986WD40_repeat_dom
IPR011047Quinoprotein_ADH-like_supfam