prot_M-pyrifera_M_contig123416.4795.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig123416.4795.1
Unique Nameprot_M-pyrifera_M_contig123416.4795.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length174
Homology
BLAST of mRNA_M-pyrifera_M_contig123416.4795.1 vs. uniprot
Match: A0A2E0RSP8_9ACTN (ABC transporter permease n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0RSP8_9ACTN)

HSP 1 Score: 266 bits (680), Expect = 3.190e-87
Identity = 140/174 (80.46%), Postives = 150/174 (86.21%), Query Frame = 0
Query:    1 TYHLGSPWLGLLVXXXXXXXXXXXXATVLVGLGANQIVTGLAFTLLAVSATSYLYQRSFSIGQNPPRIDRIDIPPLVALTLAVLAVVIVVMRKTLAGLIISATGESPVAADALGFNVQRTRYAATIAGSSLAALGGAVLVCGPLGLFIQNVTAGRGWVALALVVFAGWRPLPCV 174
            T+HLGSPWLGLL             +  LV LGANQIVTGLAFTLLA+SATSYLYQRSFSIGQNPPRIDRI +PPLV LTL VL +VIVVMRKTLAGL+ISA GESPV+ADALGF+VQR R+  T+AGSSLAALGGAVLVCGPLGLFIQNVTAGRGWVALALVVFAGWRPLPCV
Sbjct:   55 THHLGSPWLGLLAGLLVGAACGALLSGALVSLGANQIVTGLAFTLLALSATSYLYQRSFSIGQNPPRIDRISMPPLVVLTLVVLTIVIVVMRKTLAGLVISAAGESPVSADALGFDVQRVRHLTTVAGSSLAALGGAVLVCGPLGLFIQNVTAGRGWVALALVVFAGWRPLPCV 228          
BLAST of mRNA_M-pyrifera_M_contig123416.4795.1 vs. uniprot
Match: A0A6V8KTP1_9ACTN (ABC transporter permease n=1 Tax=Phytohabitans rumicis TaxID=1076125 RepID=A0A6V8KTP1_9ACTN)

HSP 1 Score: 211 bits (536), Expect = 2.130e-65
Identity = 112/174 (64.37%), Postives = 135/174 (77.59%), Query Frame = 0
Query:    1 TYHLGSPWLGLLVXXXXXXXXXXXXATVLVGLGANQIVTGLAFTLLAVSATSYLYQRSFSIGQNPPRIDRIDIPPLVALTLAVLAVVIVVMRKTLAGLIISATGESPVAADALGFNVQRTRYAATIAGSSLAALGGAVLVCGPLGLFIQNVTAGRGWVALALVVFAGWRPLPCV 174
            T   GSPWLGL              A ++V + ANQIVTGLAFTLLA SAT+YLY+RS+++GQ+PPRI+R+ +PPLVAL +AVLA V  ++ +T AGL+I+ATGE+P AADALG+ V R R AAT+AGS+L  L GA+LVCGPLGLFIQNVTAGRGWVALALVVFA WRP  CV
Sbjct:   55 TRSSGSPWLGLAAGLAVGAGCGALLAVLMVAVRANQIVTGLAFTLLASSATTYLYERSYTLGQSPPRIERLGMPPLVALVIAVLAAVWFLLNRTTAGLVITATGEAPEAADALGYRVARIRTAATVAGSALGGLAGAMLVCGPLGLFIQNVTAGRGWVALALVVFARWRPELCV 228          
BLAST of mRNA_M-pyrifera_M_contig123416.4795.1 vs. uniprot
Match: A0A6B1EHH6_9ACTN (ABC transporter permease n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1EHH6_9ACTN)

HSP 1 Score: 184 bits (467), Expect = 5.600e-55
Identity = 102/170 (60.00%), Postives = 129/170 (75.88%), Query Frame = 0
Query:    5 GSPWLGLLVXXXXXXXXXXXXATVLVGLGANQIVTGLAFTLLAVSATSYLYQRSFSIGQNPPRIDRIDIPPLVALTLAVLAVVIVVMRKTLAGLIISATGESPVAADALGFNVQRTRYAATIAGSSLAALGGAVLVCGPLGLFIQNVTAGRGWVALALVVFAGWRPLPCV 174
            GSPW+GLL    XXX      A ++V    +Q+VTG+AFT++A++AT+YL+Q  + IG+ PPR++R+ + PLVALTL  +A V  + R+T  GL ISA GESP +ADALG+NV   R+ ATIAG +LA LGGAVLV GPLGLFI+ VTAGRGWVALALVVFAGWRP+P V
Sbjct:   59 GSPWIGLLAGLLXXXLTGGVFAGLVVTFRTSQVVTGIAFTIVAIAATTYLFQLRWDIGELPPRVERLGMWPLVALTLVCVAGVWFLFRRTTLGLTISAVGESPESADALGYNVVLIRWMATIAGGALAGLGGAVLVNGPLGLFIEEVTAGRGWVALALVVFAGWRPVPAV 228          
BLAST of mRNA_M-pyrifera_M_contig123416.4795.1 vs. uniprot
Match: A0A543FWH4_9PSEU (Nucleoside ABC transporter membrane protein n=3 Tax=Pseudonocardia TaxID=1847 RepID=A0A543FWH4_9PSEU)

HSP 1 Score: 180 bits (457), Expect = 1.800e-53
Identity = 97/170 (57.06%), Postives = 124/170 (72.94%), Query Frame = 0
Query:    1 TYHLGSPWLGLLVXXXXXXXXXXXXATVLVGLGANQIVTGLAFTLLAVSATSYLYQRSFSIGQNPPRIDRIDIPPLVALTLAVLAVVIVVMRKTLAGLIISATGESPVAADALGFNVQRTRYAATIAGSSLAALGGAVLVCGPLGLFIQNVTAGRGWVALALVVFAGWRP 170
            T   G+PWLGL              A ++V + A+QIVTGLAFTL A SAT+YL+++S+++GQ PPRI  + + PLV + L VLA V  ++ +T AGL++SA GE+P A DALG+ + R R  AT+AGS+LA L GA+LVCGPLGLF+QNVTAGRGWVALALVVFA WRP
Sbjct:   55 TIASGTPWLGLGGGLLAGAACGGVLALLMVVVRADQIVTGLAFTLFAGSATTYLFEQSYTLGQAPPRIPSLSMAPLVVIVLVVLAGVWFLLTRTTAGLVLSAAGEAPEAVDALGYRIPRVRTLATVAGSALAGLAGAMLVCGPLGLFVQNVTAGRGWVALALVVFARWRP 224          
BLAST of mRNA_M-pyrifera_M_contig123416.4795.1 vs. uniprot
Match: UPI001E2DB2F3 (ABC transporter permease n=1 Tax=Pseudonocardia sp. TRM90224 TaxID=2812678 RepID=UPI001E2DB2F3)

HSP 1 Score: 176 bits (445), Expect = 1.160e-51
Identity = 95/170 (55.88%), Postives = 122/170 (71.76%), Query Frame = 0
Query:    1 TYHLGSPWLGLLVXXXXXXXXXXXXATVLVGLGANQIVTGLAFTLLAVSATSYLYQRSFSIGQNPPRIDRIDIPPLVALTLAVLAVVIVVMRKTLAGLIISATGESPVAADALGFNVQRTRYAATIAGSSLAALGGAVLVCGPLGLFIQNVTAGRGWVALALVVFAGWRP 170
            T   G+PWLGL              A ++V   A+QIVTGLAFTL A+SAT+YL++ S++IG+ PPRI  ID+  LV + + VLA V  ++ +T  GL++SA G++P A DALG+ V   R AAT+AG++LA L GA+LVCGPLGLF+QNVTAGRGWVALALVVFA WRP
Sbjct:   55 TTATGTPWLGLGSGLLAGTACGVVLALLMVVARADQIVTGLAFTLFAISATTYLFELSYTIGEPPPRIPSIDMLELVVIVIVVLAAVWFLLARTSVGLVLSAAGDAPGAVDALGYRVTNVRGAATVAGNALAGLAGAMLVCGPLGLFVQNVTAGRGWVALALVVFARWRP 224          
BLAST of mRNA_M-pyrifera_M_contig123416.4795.1 vs. uniprot
Match: UPI000E34DF2F (ABC transporter permease n=1 Tax=Desertimonas flava TaxID=2064846 RepID=UPI000E34DF2F)

HSP 1 Score: 169 bits (429), Expect = 3.470e-49
Identity = 94/170 (55.29%), Postives = 116/170 (68.24%), Query Frame = 0
Query:    5 GSPWLGLLVXXXXXXXXXXXXATVLVGLGANQIVTGLAFTLLAVSATSYLYQRSFSIGQNPPRIDRIDIPPLVALTLAVLAVVIVVMRKTLAGLIISATGESPVAADALGFNVQRTRYAATIAGSSLAALGGAVLVCGPLGLFIQNVTAGRGWVALALVVFAGWRPLPCV 174
            G  WLGLL             A  ++ L +NQIVTGLAFTLLA S T++++Q+S+ IG +PPRI RI I  L  + LAV A    V+ +T  GL +++ GE+P A DALG+ V R R  A + G++L  LGGAVLVCGPLGLFIQNVTAGRGWVALALVVFA WRP  C+
Sbjct:   66 GYTWLGLLAGVGAGLLCGVVLAFGILVLRSNQIVTGLAFTLLATSLTTFIFQQSYDIGASPPRIQRISIWLLALVVLAVFAAAWFVLERTSWGLALTSAGEAPHAVDALGYGVNRIRAVAVVTGNALVGLGGAVLVCGPLGLFIQNVTAGRGWVALALVVFARWRPSVCL 235          
BLAST of mRNA_M-pyrifera_M_contig123416.4795.1 vs. uniprot
Match: A0A349B0D8_9ACTN (ABC transporter permease n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B0D8_9ACTN)

HSP 1 Score: 167 bits (422), Expect = 3.710e-48
Identity = 89/174 (51.15%), Postives = 115/174 (66.09%), Query Frame = 0
Query:    1 TYHLGSPWLGLLVXXXXXXXXXXXXATVLVGLGANQIVTGLAFTLLAVSATSYLYQRSFSIGQNPPRIDRIDIPPLVALTLAVLAVVIVVMRKTLAGLIISATGESPVAADALGFNVQRTRYAATIAGSSLAALGGAVLVCGPLGLFIQNVTAGRGWVALALVVFAGWRPLPCV 174
            T   GSPW+GL+             +  +V + ANQ+V GL  TLL  +AT+YL++  F IG  PPRI+RI +  LV LT+A+ A+   V+ +T  GL ++A G++PVA DALG+ V R R  AT+    LA LGGA LVCGPLGLF++NVT GRGWVALALVVFA WRP  C+
Sbjct:   59 TNETGSPWVGLVAGAAAGALVGLVLSLAVVHVKANQMVAGLGITLLCTAATTYLFRTIFGIGTVPPRIERIGMDALVLLTIALFALAWFVLTRTTLGLALTAAGDAPVAVDALGYRVDRLRTGATVVSGVLAGLGGAALVCGPLGLFLENVTHGRGWVALALVVFARWRPWACL 232          
BLAST of mRNA_M-pyrifera_M_contig123416.4795.1 vs. uniprot
Match: A0A4R7JAC9_9ACTN (Simple sugar transport system permease protein n=1 Tax=Naumannella halotolerans TaxID=993414 RepID=A0A4R7JAC9_9ACTN)

HSP 1 Score: 166 bits (420), Expect = 7.210e-48
Identity = 98/168 (58.33%), Postives = 131/168 (77.98%), Query Frame = 0
Query:    5 GSPWLGLLVXXXXXXXXXXXXATVLVGLGANQIVTGLAFTLLAVSATSYLYQRSFSIGQNPPRIDRIDIPPLVALTLAVLAVVIVVMRKTLAGLIISATGESPVAADALGFNVQRTRYAATIAGSSLAALGGAVLVCGPLGLFIQNVTAGRGWVALALVVFAGWRPLP 172
            GS W+GL+ XXXXXXXXXXXX   +VGLG NQIVTGLAFT+LA + T++L++ S++IG  PPR+  + +P LVA+TL  L +V   + +T +G+ + A GE PVAA+ LG  V +TR+ A I G++LA L GA+LVCGPLG+F+Q+VTAGRGW+ALALVVFA W+P+P
Sbjct:   61 GSAWVGLIXXXXXXXXXXXXXXXXMVGLGTNQIVTGLAFTILASAVTTFLFELSYTIGAAPPRVVGLGLPQLVAVTLVCLLLVWFWLERTNSGMRLGAVGEEPVAAETLGIPVIKTRFLALIGGNALAGLAGALLVCGPLGIFVQDVTAGRGWIALALVVFARWKPVP 228          
BLAST of mRNA_M-pyrifera_M_contig123416.4795.1 vs. uniprot
Match: UPI0013EB2E36 (ABC transporter permease n=1 Tax=Phytoactinopolyspora endophytica TaxID=1642495 RepID=UPI0013EB2E36)

HSP 1 Score: 162 bits (410), Expect = 2.990e-47
Identity = 87/149 (58.39%), Postives = 114/149 (76.51%), Query Frame = 0
Query:   26 ATVLVGLGANQIVTGLAFTLLAVSATSYLYQRSFSIGQNPPRIDRIDIPPLVALTLAVLAVVIVVMRKTLAGLIISATGESPVAADALGFNVQRTRYAATIAGSSLAALGGAVLVCGPLGLFIQNVTAGRGWVALALVVFAGWRPLPCV 174
            A ++V +  NQIVTGLAFTLLA +AT+Y++++S+S+G  PPRI  + + PL+A+  A L +V  V+ +T AGL ++A GE PV+ DALG  V   R AAT AG++LA L GA+LVCGPLGLF+QNVTAGRGW+ALALVVFA WRP+  V
Sbjct:   12 AWLMVVVRTNQIVTGLAFTLLAGAATTYVFEQSYSLGTVPPRIASLSLAPLLAVAGAALLLVWFVLERTTAGLTLTAVGEDPVSVDALGTRVNPVRVAATTAGNALAGLAGALLVCGPLGLFVQNVTAGRGWIALALVVFARWRPVRVV 160          
BLAST of mRNA_M-pyrifera_M_contig123416.4795.1 vs. uniprot
Match: A0A6P0BYL1_RHILE (ABC transporter permease n=4 Tax=Rhizobium leguminosarum TaxID=384 RepID=A0A6P0BYL1_RHILE)

HSP 1 Score: 112 bits (281), Expect = 5.550e-27
Identity = 78/190 (41.05%), Postives = 107/190 (56.32%), Query Frame = 0
Query:    1 TYHLGSPWLGLLVXXXXXXXXXXXXATVLVGLGANQIVTGLAFTLLAVSATSYLYQRSFSIGQNPPRIDRI---------DIP----------PLVALTLAVLAVVIVVMRKTLAGLIISATGESPVAADALGFNVQRTRYAATIAGSSLAALGGAVLVCGPLGLFIQNVTAGRGWVALALVVFAGWRPL 171
            TY  G+ WLG++   XXXXXX    A   V +G+NQ+V G+A  LL V ATS+LY+  F +G   PR+            DIP          P+V L L ++ +V +VM +T  G  ++A GE P AA+ LG +V RTR+   +    LA LGGA L     G+FI N+TAGRG++ALA++V     PL
Sbjct:   59 TYLTGNLWLGVIAGMXXXXXXGAVLALYAVLIGSNQVVVGVAINLLIVGATSFLYRTIFGVGTAQPRVTSFAPLELTSLSDIPLIGPLLFHQAPIVYLGLVLVPIVWIVMTRTSFGWQVAAVGEHPAAAETLGISVMRTRFICLLISGLLAGLGGAFLSLSATGIFIDNMTAGRGYIALAILVLGRRHPL 248          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123416.4795.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E0RSP8_9ACTN3.190e-8780.46ABC transporter permease n=1 Tax=Acidimicrobiaceae... [more]
A0A6V8KTP1_9ACTN2.130e-6564.37ABC transporter permease n=1 Tax=Phytohabitans rum... [more]
A0A6B1EHH6_9ACTN5.600e-5560.00ABC transporter permease n=2 Tax=Acidimicrobiaceae... [more]
A0A543FWH4_9PSEU1.800e-5357.06Nucleoside ABC transporter membrane protein n=3 Ta... [more]
UPI001E2DB2F31.160e-5155.88ABC transporter permease n=1 Tax=Pseudonocardia sp... [more]
UPI000E34DF2F3.470e-4955.29ABC transporter permease n=1 Tax=Desertimonas flav... [more]
A0A349B0D8_9ACTN3.710e-4851.15ABC transporter permease n=1 Tax=Acidimicrobiaceae... [more]
A0A4R7JAC9_9ACTN7.210e-4858.33Simple sugar transport system permease protein n=1... [more]
UPI0013EB2E362.990e-4758.39ABC transporter permease n=1 Tax=Phytoactinopolysp... [more]
A0A6P0BYL1_RHILE5.550e-2741.05ABC transporter permease n=4 Tax=Rhizobium legumin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001851ABC transporter, permeasePFAMPF02653BPD_transp_2coord: 4..171
e-value: 1.8E-18
score: 66.7
NoneNo IPR availablePANTHERPTHR43370FAMILY NOT NAMEDcoord: 2..173
NoneNo IPR availablePANTHERPTHR43370:SF2coord: 2..173
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 154..171
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..102
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 103..121
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 56..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 148..153
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..55
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 172..174
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..36
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 122..147
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 37..56
NoneNo IPR availableTMHMMTMhelixcoord: 126..148
NoneNo IPR availableTMHMMTMhelixcoord: 71..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig123416contigM-pyrifera_M_contig123416:2..523 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig123416.4795.1mRNA_M-pyrifera_M_contig123416.4795.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig123416 2..523 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig123416.4795.1 ID=prot_M-pyrifera_M_contig123416.4795.1|Name=mRNA_M-pyrifera_M_contig123416.4795.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=174bp
TYHLGSPWLGLLVGLLVGAVCGAILATVLVGLGANQIVTGLAFTLLAVSA
TSYLYQRSFSIGQNPPRIDRIDIPPLVALTLAVLAVVIVVMRKTLAGLII
SATGESPVAADALGFNVQRTRYAATIAGSSLAALGGAVLVCGPLGLFIQN
VTAGRGWVALALVVFAGWRPLPCV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001851ABC_transp_permease