prot_M-pyrifera_M_contig122968.4717.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig122968.4717.1
Unique Nameprot_M-pyrifera_M_contig122968.4717.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length174
Homology
BLAST of mRNA_M-pyrifera_M_contig122968.4717.1 vs. uniprot
Match: UPI00130E40AE (ABC transporter substrate-binding protein n=1 Tax=Ilumatobacter nonamiensis TaxID=467093 RepID=UPI00130E40AE)

HSP 1 Score: 190 bits (482), Expect = 1.260e-55
Identity = 106/173 (61.27%), Postives = 131/173 (75.72%), Query Frame = 0
Query:    2 LVADDVDAIIGPTSSNSAIGALDEAVAAGVVTCSATATSIALDGFPDDGLFFRTIATDSLQAVAIARTANDTGAPDVAIIHVDDAFGRPYAEATIDALRDEGSFNVTIVSVPVGDDDLTDELDELADSGAQTAIVLGNGADTGRFLEAIAQRADIALNDIVVNDAARSAATRP 174
            L+AD VDAIIGPTSSN+AIGALD AVA G+VTCSATATSIALD +PD+GLFFR+IATDSLQA AIA+ A  TGA +VAI+HVDDA+GRPYA+A  DAL       V  + + V DDDL+D++D+L  +  Q AI+LG+G D    L  +A+R D+ +  I+VND AR  ATRP
Sbjct:  116 LIADGVDAIIGPTSSNTAIGALDTAVADGIVTCSATATSIALDDYPDEGLFFRSIATDSLQANAIAQQAQATGASNVAIVHVDDAYGRPYADAVEDALS---PIAVETIPLAVDDDDLSDDIDDLVAASPQAAIILGSGDDIATVLGEMARRDDVTVQTIIVNDDARRTATRP 285          
BLAST of mRNA_M-pyrifera_M_contig122968.4717.1 vs. uniprot
Match: A0A6C7E1R2_ILUCY (Putative ABC transporter substrate-binding protein n=1 Tax=Ilumatobacter coccineus (strain NBRC 103263 / KCTC 29153 / YM16-304) TaxID=1313172 RepID=A0A6C7E1R2_ILUCY)

HSP 1 Score: 154 bits (389), Expect = 5.430e-42
Identity = 88/173 (50.87%), Postives = 115/173 (66.47%), Query Frame = 0
Query:    2 LVADDVDAIIGPTSSNSAIGALDEAVAAGVVTCSATATSIALDGFPDDGLFFRTIATDSLQAVAIARTANDTGAPDVAIIHVDDAFGRPYAEATIDALRDEGSFNVTIVSVPVGDDDLTDELDELADSGAQTAIVLGNGADTGRFLEAIAQRADIALNDIVVNDAARSAATRP 174
            L+ D VDAIIGP+SS +AIGA     AA V+TCS TAT+I+LD FPDD LFFRTIA+DSLQA+AIA  A  TGA ++AI+HVDDA+GRPYA A  +AL          +S+PV  +       +L +S A  AIVLG   D+ RFL+A+ Q++   L+ +++ND  R  A  P
Sbjct:  115 LIDDGVDAIIGPSSSLAAIGAXXXXXAAEVLTCSPTATAISLDDFPDDRLFFRTIASDSLQAIAIAEEAEQTGARNIAIVHVDDAYGRPYANAVAEALEGRPLTLSDTISIPVNAETFDSAAIDLVESDATVAIVLGAARDSARFLDALGQQSFGGLSHVILNDPIRDPAAEP 287          
BLAST of mRNA_M-pyrifera_M_contig122968.4717.1 vs. uniprot
Match: A0A524NAL7_9ACTN (Amino acid ABC transporter substrate-binding protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A524NAL7_9ACTN)

HSP 1 Score: 147 bits (371), Expect = 4.900e-39
Identity = 87/172 (50.58%), Postives = 116/172 (67.44%), Query Frame = 0
Query:    2 LVADDVDAIIGPTSSNSAIGALDEAVAAGVVTCSATATSIALDGFPDDGLFFRTIATDSLQAVAIARTANDTGAPDVAIIHVDDAFGRPYAEATIDALRDEGSFNVTIVSVPVG-DDDLTDELDELADSGAQTAIVLGNGADTGRFLEAIAQRADIALNDIVVNDAARSAAT 172
            L+A DVD I+GP SS  A+  L E V++G + CS TA+++ALDGFPD GLFFRT+ +DSLQA AIA  A+ TGA +  I+H+DD++GR +A+  ++A    GS +V    +  G DDDL+DE  +L DSGAQ AIVL    D  RFLEA+ +    AL+ +VVNDA R   T
Sbjct:  155 LLAQDVDVIVGPGSSTIALSTLGEIVSSGTLACSPTASALALDGFPDGGLFFRTVPSDSLQARAIADVADQTGALEATIVHIDDSYGRDFAD-NVEASMAGGSISVAERIMFTGRDDDLSDEARQLLDSGAQVAIVLAGDDDGTRFLEALGELDTSALSTVVVNDAMRKPVT 325          
BLAST of mRNA_M-pyrifera_M_contig122968.4717.1 vs. uniprot
Match: A0A7Y1ZW20_9ACTN (ABC transporter substrate-binding protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A7Y1ZW20_9ACTN)

HSP 1 Score: 146 bits (369), Expect = 5.150e-39
Identity = 92/177 (51.98%), Postives = 121/177 (68.36%), Query Frame = 0
Query:    1 ALVADDVDAIIGPTSSNSAIGALDEAVAAGVVTCSATATSIALDGFPDDGLFFRTIATDSLQAVAIARTANDTGAPDVAIIHVDDAFGRPYAEATIDALRDEGSFNVTIVSVP--VGDDDLTDEL-DELADSGAQTAIVLGNGADTGRFLEAIAQRADIALNDIVVNDAARSAATRP 174
            AL+ DDVDA++GP+SS  A+  LD+ V+AGV TCS TA+++ALD +PD+GLFFRTI +DSLQA+AIA  A  TG  +VA+++VDDA+GRP+A A  DAL  EGS +V  V     V  D   D L   +ADSGA+  IVL    D    LEA+++    +L DIVVNDA R+ A +P
Sbjct:  114 ALLDDDVDAVVGPSSSLIALSTLDDLVSAGVATCSPTASALALDDYPDEGLFFRTIPSDSLQAIAIADVAERTGVRNVAVVYVDDAYGRPFARAVEDALS-EGSRSVDAVETFGFVRSDGALDALATRVADSGARVVIVLAASDDGTAVLEALSRTDFGSLTDIVVNDAFRNPAAQP 289          
BLAST of mRNA_M-pyrifera_M_contig122968.4717.1 vs. uniprot
Match: A0A2E3TS67_9ACTN (Peripla_BP_6 domain-containing protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A2E3TS67_9ACTN)

HSP 1 Score: 129 bits (323), Expect = 3.140e-32
Identity = 77/170 (45.29%), Postives = 109/170 (64.12%), Query Frame = 0
Query:    7 VDAIIGPTSSNSAIGALDEAVAAGVVTCSATATSIALDGFPD-DGLFFRTIATDSLQAVAIARTANDTGAPDVAIIHVDDAFGRPYAEATIDALRDEGSFN-VTIVSVPVGDDDLTDELDELADSGAQTAIVLGNGADTGRFLEAIAQRADIALNDIVVNDAARSAATRP 174
            VDA+IGP+SS +A+  LD  VAAG+ +CS TAT++ALD FPD   LFFRT+ +DSLQAVA A  A  TG  DVA++++DDA+GRP+A A  +AL      + V        D DL ++  ++ADSGA+  ++L    D   FLEA+   +  +++DI+VND  R  +  P
Sbjct:  134 VDAVIGPSSSLTALKHLDTLVAAGIPSCSPTATALALDNFPDPQRLFFRTVPSDSLQAVAAAELAERTGVQDVAVVYIDDAYGRPFAAAVEEALAVGTQVSRVENYGFVRSDGDLAEKARQVADSGARVVVLLAGSDDGAAFLEALDDTSFGSISDIIVNDTMRDPSVTP 303          
BLAST of mRNA_M-pyrifera_M_contig122968.4717.1 vs. uniprot
Match: A0A6N2DL47_9ACTN (Peripla_BP_6 domain-containing protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A6N2DL47_9ACTN)

HSP 1 Score: 122 bits (305), Expect = 1.140e-29
Identity = 76/170 (44.71%), Postives = 105/170 (61.76%), Query Frame = 0
Query:    2 LVADDVDAIIGPTSSNSAIGALDEAVAAGVVTCSATATSIALDGFPDDGLFFRTIATDSLQAVAIARTANDTGAPDVAIIHVDDAFGRPYAEATIDALRDEGSFNVTIVSVPVGDDDLTDELDELADSGAQTAIVLGNGADTGRFLEAIA-QRADIALNDIVVNDAARSA 170
            L+ + VDAI+GP SS +A+GALD  V+AGV+TCS TATS+ LD FPD+GLFFRT  +DSLQAVAIA+ A  TG P V+I  +DDA+GR   +A   ++          V VPVG+ ++     E+        +V+G+     R L A+  + A    + I+VNDA R+A
Sbjct:  127 LLDEGVDAIVGPASSLAALGALDVPVSAGVLTCSPTATSLLLDDFPDNGLFFRTAPSDSLQAVAIAQVAEQTGTPSVSIFFIDDAYGRGLTDAIESSVEARTMSVRHRVGVPVGESEIAPYAREVLADEPNVVVVIGDADAGSRMLAALGDESATWTPSLILVNDAVRAA 296          
BLAST of mRNA_M-pyrifera_M_contig122968.4717.1 vs. uniprot
Match: A0A7W1HJZ6_9ACTN (ABC transporter substrate-binding protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1HJZ6_9ACTN)

HSP 1 Score: 120 bits (300), Expect = 2.860e-29
Identity = 72/173 (41.62%), Postives = 104/173 (60.12%), Query Frame = 0
Query:    2 LVADDVDAIIGPTSSNSAIGALDEAVAAGVVTCSATATSIALDGFPDDGLFFRTIATDSLQAVAIARTANDTGAPDVAIIHVDDAFGRPYAEATIDALRDEGSFNVTIVSVP--VGDDDLTDELDELADSGAQTAIVLGNGADTGRFLEAI----AQRADIALNDIVVNDAAR 168
            L+  DVDA++GP SS  A+  LD  VAA ++TCS +AT++ALD FPDD LFFRT  +DSLQA+ +A+ A  TG   VA+  +DD +GRP+A  TI  +         +  +P    DDD TDE + +A+      IV+ + +   RFL A+    AQ  +  + DI+++DA R
Sbjct:   73 LIDADVDAVVGPASSTIALSTLDLLVAADILTCSPSATTLALDAFPDDDLFFRTAPSDSLQALGLAQLAELTGETAVAVAWLDDVYGRPFASTTIAEIESRNVPFRLVADIPFRAADDDFTDEAERVAEQEPGVVIVVADASSGSRFLGALGAAYAQVPNDDVPDIIISDAMR 245          
BLAST of mRNA_M-pyrifera_M_contig122968.4717.1 vs. uniprot
Match: A0A7V9IJN9_9ACTN (ABC transporter substrate-binding protein n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9IJN9_9ACTN)

HSP 1 Score: 118 bits (295), Expect = 2.540e-28
Identity = 80/166 (48.19%), Postives = 106/166 (63.86%), Query Frame = 0
Query:    7 VDAIIGPTSSNSAIGALDEAVAAGVVTCSATATSIALDGFPDDGLFFRTIATDSLQAVAIARTANDTGAPDVAIIHVDDAFGRPYAEATIDALRDEGSFNVTIVSVPVGDDDLTDELDELADSGAQTAIVLGNGADTGRFLEAI--AQRADIALN--DIVVNDAAR 168
            VDA+IGPTSS +A+  LD  V  GV+ CS TA+++ALD  PD+GLFFRTI +DSLQAVAIA  A  TGA + +I++VDDA+GR  A+A  +AL+   S  V+ + V   + +LT E   L       AI+LG+     R L A+  A R D AL   D++VNDA R
Sbjct:  115 VDAVIGPTSSLTALSDLDTIVGDGVLACSPTASALALDEIPDEGLFFRTIPSDSLQAVAIAELAEGTGAQNASIVYVDDAYGRGLAQAVTEALQAR-SIAVSQMGVASVERNLTAEALSLLAGKGDVAIILGDDVRGPRLLTAMGDAIRDDPALPVPDVIVNDAMR 279          
BLAST of mRNA_M-pyrifera_M_contig122968.4717.1 vs. uniprot
Match: A0A7X9KN11_9ACTN (Amino acid ABC transporter substrate-binding protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X9KN11_9ACTN)

HSP 1 Score: 114 bits (286), Expect = 5.250e-27
Identity = 68/162 (41.98%), Postives = 100/162 (61.73%), Query Frame = 0
Query:    7 VDAIIGPTSSNSAIGALDEAVAAGVVTCSATATSIALDGFPDDGLFFRTIATDSLQAVAIARTANDTGAPDVAIIHVDDAFGRPYAEATIDALRDEGSFNVTIVSVPVGDDDLTDELDELADSGAQTAIVLGNGADTGRFLEAIAQRADIALNDIVVNDAAR 168
            VDAIIGPTSS + + AL  +V AGV+TC  TA+++ALD FPDDGLFFRTI +DSLQA AIA     +G+    ++++DD +GRP+AEA  +A+   G+     V+    +D ++  ++++  +  +   V+ +GA     + AI   A   L   VVNDA R
Sbjct:  116 VDAIIGPTSSTNTLSALTASVDAGVLTCGPTASALALDEFPDDGLFFRTIPSDSLQAQAIASVVEASGSSTAIVVYLDDDYGRPFAEAAQEAIIARGTRVSATVAFTANEDSVSAAVEQVLANQPEVVAVIADGASGPAIINAIDAAATTRLT-YVVNDAIR 276          
BLAST of mRNA_M-pyrifera_M_contig122968.4717.1 vs. uniprot
Match: A0A7W0T6M9_9ACTN (ABC transporter substrate-binding protein n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0T6M9_9ACTN)

HSP 1 Score: 114 bits (285), Expect = 6.800e-27
Identity = 69/167 (41.32%), Postives = 99/167 (59.28%), Query Frame = 0
Query:    6 DVDAIIGPTSSNSAIGALDEAVAAGVVTCSATATSIALDGFPDDGLFFRTIATDSLQAVAIARTANDTGAPDVAIIHVDDAFGRPYAEATIDALRDEGSFNVTIVSVPVGDDDLTDELDELADSGAQTAIVLGNGADTGRFLEAIA----QRADIALNDIVVNDAAR 168
            DVD +IGPTSS + I  L   V +GV+TCS TA+++ LD FPD+GLFFRTI +DSLQA+A+A  A  TG    ++++ DDA+GR  A A  D L  + +  V +  V  GDDD+  E        ++  IVLG+     R L A+     +  ++ + D++VND  R
Sbjct:  114 DVDVVIGPTSSLNTIAELGTMVDSGVLTCSPTASALLLDDFPDNGLFFRTIPSDSLQALALAEQAERTGTRKASVVYFDDAYGRGLANAVTDELEAK-AIPVEVTRVGAGDDDVRAEAASALSDRSEVVIVLGDTTSGPRILAAMGSVLRRNTELDIPDVLVNDGLR 279          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122968.4717.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00130E40AE1.260e-5561.27ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A6C7E1R2_ILUCY5.430e-4250.87Putative ABC transporter substrate-binding protein... [more]
A0A524NAL7_9ACTN4.900e-3950.58Amino acid ABC transporter substrate-binding prote... [more]
A0A7Y1ZW20_9ACTN5.150e-3951.98ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A2E3TS67_9ACTN3.140e-3245.29Peripla_BP_6 domain-containing protein n=1 Tax=Ilu... [more]
A0A6N2DL47_9ACTN1.140e-2944.71Peripla_BP_6 domain-containing protein n=1 Tax=Ilu... [more]
A0A7W1HJZ6_9ACTN2.860e-2941.62ABC transporter substrate-binding protein n=1 Tax=... [more]
A0A7V9IJN9_9ACTN2.540e-2848.19ABC transporter substrate-binding protein n=2 Tax=... [more]
A0A7X9KN11_9ACTN5.250e-2741.98Amino acid ABC transporter substrate-binding prote... [more]
A0A7W0T6M9_9ACTN6.800e-2741.32ABC transporter substrate-binding protein n=2 Tax=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028081Leucine-binding protein domainPFAMPF13458Peripla_BP_6coord: 2..156
e-value: 9.2E-20
score: 71.6
NoneNo IPR availableGENE3D3.40.50.2300coord: 1..144
e-value: 9.3E-17
score: 63.3
NoneNo IPR availablePANTHERPTHR30483LEUCINE-SPECIFIC-BINDING PROTEINcoord: 4..153
IPR028082Periplasmic binding protein-like ISUPERFAMILY53822Periplasmic binding protein-like Icoord: 2..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig122968contigM-pyrifera_M_contig122968:3..524 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig122968.4717.1mRNA_M-pyrifera_M_contig122968.4717.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig122968 3..524 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig122968.4717.1 ID=prot_M-pyrifera_M_contig122968.4717.1|Name=mRNA_M-pyrifera_M_contig122968.4717.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=174bp
ALVADDVDAIIGPTSSNSAIGALDEAVAAGVVTCSATATSIALDGFPDDG
LFFRTIATDSLQAVAIARTANDTGAPDVAIIHVDDAFGRPYAEATIDALR
DEGSFNVTIVSVPVGDDDLTDELDELADSGAQTAIVLGNGADTGRFLEAI
AQRADIALNDIVVNDAARSAATRP
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028081Leu-bd
IPR028082Peripla_BP_I