prot_M-pyrifera_M_contig122948.4713.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig122948.4713.1
Unique Nameprot_M-pyrifera_M_contig122948.4713.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length104
Homology
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BLAST of mRNA_M-pyrifera_M_contig122948.4713.1 vs. uniprot
Match: X0U7W7_9ZZZZ (C-type lectin domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0U7W7_9ZZZZ)

HSP 1 Score: 57.0 bits (136), Expect = 2.170e-7
Identity = 37/104 (35.58%), Postives = 51/104 (49.04%), Query Frame = 0 
Query:    1 MHAASEGTAFAEYSVPASTYFLLTGCAALHDSDTPPESPLTFRVLADGELLWSSDPIQVSGVRAPFQVLLPPALSASESIKLRLEVVCPGSNTNARSVFATPSL 104
            MH  S G +   Y +    +   +  AA +D      +P+TF+VL DG+LLW S PIQV G     +V        S   KL L V CPG ++ A +V+  P L
Sbjct:   87 MHPLSNGASHVAYRLDGK-FRSFSAAAAQNDDMGSSSTPMTFKVLGDGKLLWVSPPIQVKGAAQECRV------DVSGVSKLELVVECPGIDSQAHAVWVEPRL 183
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BLAST of mRNA_M-pyrifera_M_contig122948.4713.1 vs. uniprot
Match: D2R3J4_PIRSD (Glycosyl hydrolase family 98 putative carbohydrate binding module n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) TaxID=530564 RepID=D2R3J4_PIRSD)

HSP 1 Score: 52.4 bits (124), Expect = 1.330e-5
Identity = 35/80 (43.75%), Postives = 52/80 (65.00%), Query Frame = 0 
Query:   22 LLTGCAALHDSDTPPE-SPLTFRVLADGELLWSSDPIQ-VSGVRAPFQVLLPPALSASESIKLRLEVVCPGSNTNARSVF 99
            +LTG  + +DS T    +PLT RV+ DG++LW+S PI+ VS V+A FQV        +   +L+LEVVCPG+N  + +V+
Sbjct:  524 MLTGAVSQNDSATDLAFTPLTMRVVGDGQVLWASRPIRSVSDVQA-FQV------DITGVNQLQLEVVCPGNNGKSHAVW 596
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122948.4713.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
X0U7W7_9ZZZZ2.170e-735.58C-type lectin domain-containing protein (Fragment)... [more]
D2R3J4_PIRSD1.330e-543.75Glycosyl hydrolase family 98 putative carbohydrate... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 8..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig122948contigM-pyrifera_M_contig122948:69..380 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig122948.4713.1mRNA_M-pyrifera_M_contig122948.4713.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig122948 54..380 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig122948.4713.1 ID=prot_M-pyrifera_M_contig122948.4713.1|Name=mRNA_M-pyrifera_M_contig122948.4713.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=104bp
MHAASEGTAFAEYSVPASTYFLLTGCAALHDSDTPPESPLTFRVLADGEL
LWSSDPIQVSGVRAPFQVLLPPALSASESIKLRLEVVCPGSNTNARSVFA
TPSL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008979Galactose-bd-like_sf