prot_M-pyrifera_M_contig122919.4704.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig122919.4704.1
Unique Nameprot_M-pyrifera_M_contig122919.4704.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length38
Homology
BLAST of mRNA_M-pyrifera_M_contig122919.4704.1 vs. uniprot
Match: A0A6M8ZJR8_TROMA (Photosystem I reaction center subunit VIII n=1 Tax=Tropaeolum majus TaxID=4020 RepID=A0A6M8ZJR8_TROMA)

HSP 1 Score: 67.4 bits (163), Expect = 2.950e-14
Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 0
Query:    1 MITFNSFPSIFVPLVGLVFPAIAMASLSLYVQKNKIF 37
            M TFN+FPSIFVPLVGLVFPAIAMASLS+YVQKNKIF
Sbjct:    1 MTTFNNFPSIFVPLVGLVFPAIAMASLSIYVQKNKIF 37          
BLAST of mRNA_M-pyrifera_M_contig122919.4704.1 vs. uniprot
Match: R4S0Z0_9ROSA (Photosystem I reaction center subunit VIII n=273 Tax=Mesangiospermae TaxID=1437183 RepID=R4S0Z0_9ROSA)

HSP 1 Score: 66.2 bits (160), Expect = 8.470e-14
Identity = 35/37 (94.59%), Postives = 35/37 (94.59%), Query Frame = 0
Query:    1 MITFNSFPSIFVPLVGLVFPAIAMASLSLYVQKNKIF 37
            MIT NS PSIFVPLVGLVFPAIAMASLSLYVQKNKIF
Sbjct:    1 MITLNSVPSIFVPLVGLVFPAIAMASLSLYVQKNKIF 37          
BLAST of mRNA_M-pyrifera_M_contig122919.4704.1 vs. uniprot
Match: A0A649ZCV1_VAUCA (Photosystem I reaction center subunit VIII n=5 Tax=Vauquelinia TaxID=23231 RepID=A0A649ZCV1_VAUCA)

HSP 1 Score: 66.2 bits (160), Expect = 8.470e-14
Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = 0
Query:    1 MITFNSFPSIFVPLVGLVFPAIAMASLSLYVQKNKIF 37
            MIT NSFP +FVPLVGLVFPAIAMASLSLY+QKNKIF
Sbjct:    1 MITLNSFPPVFVPLVGLVFPAIAMASLSLYIQKNKIF 37          
BLAST of mRNA_M-pyrifera_M_contig122919.4704.1 vs. uniprot
Match: PSAI_GOSHI (Photosystem I reaction center subunit VIII n=138 Tax=Viridiplantae TaxID=33090 RepID=PSAI_GOSHI)

HSP 1 Score: 65.1 bits (157), Expect = 2.430e-13
Identity = 34/37 (91.89%), Postives = 35/37 (94.59%), Query Frame = 0
Query:    1 MITFNSFPSIFVPLVGLVFPAIAMASLSLYVQKNKIF 37
            M TF+SFPSIFVPLVGLVFPAIAMASLSLYVQK KIF
Sbjct:    1 MTTFSSFPSIFVPLVGLVFPAIAMASLSLYVQKTKIF 37          
BLAST of mRNA_M-pyrifera_M_contig122919.4704.1 vs. uniprot
Match: A0A2Z4FG48_9ROSI (Photosystem I reaction center subunit VIII n=4 Tax=Pentapetalae TaxID=1437201 RepID=A0A2Z4FG48_9ROSI)

HSP 1 Score: 64.7 bits (156), Expect = 3.460e-13
Identity = 34/37 (91.89%), Postives = 34/37 (91.89%), Query Frame = 0
Query:    1 MITFNSFPSIFVPLVGLVFPAIAMASLSLYVQKNKIF 37
            M T NSFPSIFVPLVGLVFPAIAMASLSLYVQK KIF
Sbjct:    1 MTTLNSFPSIFVPLVGLVFPAIAMASLSLYVQKTKIF 37          
BLAST of mRNA_M-pyrifera_M_contig122919.4704.1 vs. uniprot
Match: A0A6H0CD01_ROSCN (Photosystem I reaction center subunit VIII n=176 Tax=Rosaceae TaxID=3745 RepID=A0A6H0CD01_ROSCN)

HSP 1 Score: 64.7 bits (156), Expect = 3.460e-13
Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = 0
Query:    1 MITFNSFPSIFVPLVGLVFPAIAMASLSLYVQKNKIF 37
            MI FN+FPSIFVPLVGLVFPAIAM SLSL+VQKNKIF
Sbjct:    1 MIAFNNFPSIFVPLVGLVFPAIAMVSLSLHVQKNKIF 37          
BLAST of mRNA_M-pyrifera_M_contig122919.4704.1 vs. uniprot
Match: A0A1V0IT14_9ROSA (Photosystem I reaction center subunit VIII n=1 Tax=Coleogyne ramosissima TaxID=401069 RepID=A0A1V0IT14_9ROSA)

HSP 1 Score: 63.9 bits (154), Expect = 6.990e-13
Identity = 33/37 (89.19%), Postives = 34/37 (91.89%), Query Frame = 0
Query:    1 MITFNSFPSIFVPLVGLVFPAIAMASLSLYVQKNKIF 37
            MI  NSFPSI VPLVGLVFPAIAMASLSLY+QKNKIF
Sbjct:    1 MIILNSFPSILVPLVGLVFPAIAMASLSLYIQKNKIF 37          
BLAST of mRNA_M-pyrifera_M_contig122919.4704.1 vs. uniprot
Match: A0A1V0IQC8_9ROSA (Photosystem I reaction center subunit VIII n=134 Tax=Mesangiospermae TaxID=1437183 RepID=A0A1V0IQC8_9ROSA)

HSP 1 Score: 63.5 bits (153), Expect = 9.940e-13
Identity = 33/37 (89.19%), Postives = 34/37 (91.89%), Query Frame = 0
Query:    1 MITFNSFPSIFVPLVGLVFPAIAMASLSLYVQKNKIF 37
            MI  NSFPSIFVPLVGLVFPA+AMASL LYVQKNKIF
Sbjct:    1 MIILNSFPSIFVPLVGLVFPALAMASLFLYVQKNKIF 37          
BLAST of mRNA_M-pyrifera_M_contig122919.4704.1 vs. uniprot
Match: A0A0D2V567_GOSRA (Photosystem I reaction center subunit VIII n=1 Tax=Gossypium raimondii TaxID=29730 RepID=A0A0D2V567_GOSRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.410e-12
Identity = 33/37 (89.19%), Postives = 34/37 (91.89%), Query Frame = 0
Query:    1 MITFNSFPSIFVPLVGLVFPAIAMASLSLYVQKNKIF 37
            MITFNSFPSIFVPLVGL+F AI MASLSLYVQK KIF
Sbjct:    1 MITFNSFPSIFVPLVGLLFKAIVMASLSLYVQKTKIF 37          
BLAST of mRNA_M-pyrifera_M_contig122919.4704.1 vs. uniprot
Match: A0A866UAY8_9ROSA (Photosystem I reaction center subunit VIII n=2 Tax=Spiraea TaxID=23224 RepID=A0A866UAY8_9ROSA)

HSP 1 Score: 62.8 bits (151), Expect = 1.970e-12
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 0
Query:    3 TFNSFPSIFVPLVGLVFPAIAMASLSLYVQKNKIF 37
            T NSFPSIFVPLVGLVFPA+AMASL LYVQKNKIF
Sbjct:    2 TLNSFPSIFVPLVGLVFPALAMASLFLYVQKNKIF 36          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122919.4704.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6M8ZJR8_TROMA2.950e-1491.89Photosystem I reaction center subunit VIII n=1 Tax... [more]
R4S0Z0_9ROSA8.470e-1494.59Photosystem I reaction center subunit VIII n=273 T... [more]
A0A649ZCV1_VAUCA8.470e-1489.19Photosystem I reaction center subunit VIII n=5 Tax... [more]
PSAI_GOSHI2.430e-1391.89Photosystem I reaction center subunit VIII n=138 T... [more]
A0A2Z4FG48_9ROSI3.460e-1391.89Photosystem I reaction center subunit VIII n=4 Tax... [more]
A0A6H0CD01_ROSCN3.460e-1389.19Photosystem I reaction center subunit VIII n=176 T... [more]
A0A1V0IT14_9ROSA6.990e-1389.19Photosystem I reaction center subunit VIII n=1 Tax... [more]
A0A1V0IQC8_9ROSA9.940e-1389.19Photosystem I reaction center subunit VIII n=134 T... [more]
A0A0D2V567_GOSRA1.410e-1289.19Photosystem I reaction center subunit VIII n=1 Tax... [more]
A0A866UAY8_9ROSA1.970e-1291.43Photosystem I reaction center subunit VIII n=2 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001302Photosystem I reaction centre subunit VIIITIGRFAMTIGR03052TIGR03052coord: 8..34
e-value: 1.0E-16
score: 58.4
IPR001302Photosystem I reaction centre subunit VIIIPFAMPF00796PSI_8coord: 8..31
e-value: 1.3E-11
score: 44.1
IPR001302Photosystem I reaction centre subunit VIIIPANTHERPTHR35775FAMILY NOT NAMEDcoord: 2..37
IPR001302Photosystem I reaction centre subunit VIIIHAMAPMF_00431PSI_PsaIcoord: 4..37
score: 12.982
NoneNo IPR availablePANTHERPTHR35775:SF2PHOTOSYSTEM I REACTION CENTER SUBUNIT VIIIcoord: 2..37
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..37
NoneNo IPR availablePRODOMPD003995coord: 6..36
e-value: 2.0E-9
score: 142.0
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
IPR036357Photosystem I reaction centre subunit VIII superfamilySUPERFAMILY81540Subunit VIII of photosystem I reaction centre, PsaIcoord: 4..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig122919contigM-pyrifera_M_contig122919:291..404 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig122919.4704.1mRNA_M-pyrifera_M_contig122919.4704.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig122919 291..404 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig122919.4704.1 ID=prot_M-pyrifera_M_contig122919.4704.1|Name=mRNA_M-pyrifera_M_contig122919.4704.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=38bp
MITFNSFPSIFVPLVGLVFPAIAMASLSLYVQKNKIF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001302PSI_PsaI
IPR036357PSI_PsaI_sf