prot_M-pyrifera_M_contig122917.4703.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig122917.4703.1
Unique Name	prot_M-pyrifera_M_contig122917.4703.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	162

Homology

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BLAST of mRNA_M-pyrifera_M_contig122917.4703.1 vs. uniprot
Match: A0A0W7WH79_9RHOB (Uncharacterized protein n=6 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A0W7WH79_9RHOB)

HSP 1 Score: 303 bits (775), Expect = 1.820e-101
Identity = 151/161 (93.79%), Postives = 155/161 (96.27%), Query Frame = 0

Query:    1 MGLYLSFLFLVARFVLAWVVYNHTRWGAAVIAVGNSEENARLAGVNVDRVKIGVFMFSALCSGFAGIMLSSRMGFVQPGLDGNGLLLDGIAAIIIGGTLILGGRGTIGGAFWGLLFIGIINNALNLLNVEDVWHQVFKGAVILAALGANWILWQSRQIEAH 161
            +GLY SFLFL+A F LAWVVYNHT WGAAVIAVGNSEENARLAGVNVDRVKIGVFM S LCSGFAGIMLSSRMGFVQPGLDGNGLLLDGIAAIIIGGTLILGGRGTIGGAFWGLLFIGIINNALNLLNVEDVWHQVFKGAVILAALGANW+LWQSRQ+EAH
Sbjct:  158 LGLYWSFLFLLALFALAWVVYNHTSWGAAVIAVGNSEENARLAGVNVDRVKIGVFMVSGLCSGFAGIMLSSRMGFVQPGLDGNGLLLDGIAAIIIGGTLILGGRGTIGGAFWGLLFIGIINNALNLLNVEDVWHQVFKGAVILAALGANWLLWQSRQVEAH 318

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BLAST of mRNA_M-pyrifera_M_contig122917.4703.1 vs. uniprot
Match: UPI001487E6C6 (ABC transporter permease n=2 Tax=Ruegeria TaxID=97050 RepID=UPI001487E6C6)

HSP 1 Score: 296 bits (757), Expect = 9.900e-99
Identity = 143/161 (88.82%), Postives = 154/161 (95.65%), Query Frame = 0

Query:    1 MGLYLSFLFLVARFVLAWVVYNHTRWGAAVIAVGNSEENARLAGVNVDRVKIGVFMFSALCSGFAGIMLSSRMGFVQPGLDGNGLLLDGIAAIIIGGTLILGGRGTIGGAFWGLLFIGIINNALNLLNVEDVWHQVFKGAVILAALGANWILWQSRQIEAH 161
            MG Y SFLFLV  FVLA++VYNHTRWG+ V+A+GNSEENA+LAG+NVDRVKIG+FMFS LCSGFAGIMLS+RMGFVQPGLDGNGLLLDGIAAIIIGGTLILGGRGTIGGAFWGLLFIG+INNALNLLNVEDVWHQVFKGAVILAALGANW+LWQSRQ EAH
Sbjct:  158 MGFYWSFLFLVVLFVLAYIVYNHTRWGSYVVAIGNSEENAKLAGINVDRVKIGIFMFSGLCSGFAGIMLSTRMGFVQPGLDGNGLLLDGIAAIIIGGTLILGGRGTIGGAFWGLLFIGVINNALNLLNVEDVWHQVFKGAVILAALGANWVLWQSRQAEAH 318

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BLAST of mRNA_M-pyrifera_M_contig122917.4703.1 vs. uniprot
Match: UPI0015CDE165 (ABC transporter permease n=1 Tax=Jannaschia marina TaxID=2741674 RepID=UPI0015CDE165)

HSP 1 Score: 283 bits (724), Expect = 1.490e-93
Identity = 137/161 (85.09%), Postives = 151/161 (93.79%), Query Frame = 0

Query:    1 MGLYLSFLFLVARFVLAWVVYNHTRWGAAVIAVGNSEENARLAGVNVDRVKIGVFMFSALCSGFAGIMLSSRMGFVQPGLDGNGLLLDGIAAIIIGGTLILGGRGTIGGAFWGLLFIGIINNALNLLNVEDVWHQVFKGAVILAALGANWILWQSRQIEAH 161
            +G+YLSF FLVA F LA+VVYNHTR G  +IA+GNSEENA+LAG+N+DRVKIG+FMFS LCSGFAG+MLS+RMGFVQPGLDGNGLLLDGIAAIIIGGTLILGGRGTIGGAFWGLLFIG++NNALNLLNVEDVWHQVFKG VILAALGANWILWQSR+  AH
Sbjct:  170 LGIYLSFWFLVALFGLAYVVYNHTRIGTCIIAIGNSEENAKLAGINIDRVKIGIFMFSGLCSGFAGVMLSTRMGFVQPGLDGNGLLLDGIAAIIIGGTLILGGRGTIGGAFWGLLFIGLVNNALNLLNVEDVWHQVFKGLVILAALGANWILWQSREATAH 330

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BLAST of mRNA_M-pyrifera_M_contig122917.4703.1 vs. uniprot
Match: A0A1M5QIP9_9RHOB (Ribose transport system permease protein n=1 Tax=Cognatishimia maritima TaxID=870908 RepID=A0A1M5QIP9_9RHOB)

HSP 1 Score: 281 bits (720), Expect = 4.110e-93
Identity = 137/160 (85.62%), Postives = 150/160 (93.75%), Query Frame = 0

Query:    2 GLYLSFLFLVARFVLAWVVYNHTRWGAAVIAVGNSEENARLAGVNVDRVKIGVFMFSALCSGFAGIMLSSRMGFVQPGLDGNGLLLDGIAAIIIGGTLILGGRGTIGGAFWGLLFIGIINNALNLLNVEDVWHQVFKGAVILAALGANWILWQSRQIEAH 161
            G Y SFLFLVA F LA+VVYNHTRWGA VIA+GNSEENA+LAG+NVDRVKIG+FMFSALCSGFAG++LSSRMGFVQPGLDGNGLLLDGIAAIIIGGTLILGGRGT+ GAFWGLLFIG+ NNALNLLNV DVWHQVFKG++ILAALGAN++LWQSRQ EA 
Sbjct:  159 GFYASFLFLVALFALAYVVYNHTRWGAYVIAIGNSEENAKLAGINVDRVKIGIFMFSALCSGFAGVILSSRMGFVQPGLDGNGLLLDGIAAIIIGGTLILGGRGTVTGAFWGLLFIGVTNNALNLLNVTDVWHQVFKGSIILAALGANYVLWQSRQAEAQ 318

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BLAST of mRNA_M-pyrifera_M_contig122917.4703.1 vs. uniprot
Match: A0A1I6HDS5_9RHOB (Ribose transport system permease protein n=2 Tax=Rhodobacterales TaxID=204455 RepID=A0A1I6HDS5_9RHOB)

HSP 1 Score: 274 bits (701), Expect = 3.050e-90
Identity = 133/160 (83.12%), Postives = 146/160 (91.25%), Query Frame = 0

Query:    2 GLYLSFLFLVARFVLAWVVYNHTRWGAAVIAVGNSEENARLAGVNVDRVKIGVFMFSALCSGFAGIMLSSRMGFVQPGLDGNGLLLDGIAAIIIGGTLILGGRGTIGGAFWGLLFIGIINNALNLLNVEDVWHQVFKGAVILAALGANWILWQSRQIEAH 161
            G+YLSFLFL+     A+VVYNHTR GAA+IA+GNSEENA+LAG+NVDRVKIG+FMFS LCSGFAGIMLS+RMGFVQPGLDGNGLLLD IAAIIIGGTLI GGRGTIGGA WG+ FIGI+NNALNLLNVEDVWHQVFKG VILAALG NW+LWQS+Q EAH
Sbjct:  158 GIYLSFLFLIGLCAAAYVVYNHTRIGAAIIAIGNSEENAKLAGINVDRVKIGIFMFSGLCSGFAGIMLSTRMGFVQPGLDGNGLLLDAIAAIIIGGTLIQGGRGTIGGALWGIAFIGIVNNALNLLNVEDVWHQVFKGVVILAALGVNWLLWQSKQSEAH 317

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BLAST of mRNA_M-pyrifera_M_contig122917.4703.1 vs. uniprot
Match: UPI0009E42312 (ABC transporter permease n=1 Tax=Pseudorhodobacter wandonensis TaxID=1120568 RepID=UPI0009E42312)

HSP 1 Score: 271 bits (694), Expect = 3.630e-89
Identity = 135/161 (83.85%), Postives = 147/161 (91.30%), Query Frame = 0

Query:    1 MGLYLSFLFLVARFVLAWVVYNHTRWGAAVIAVGNSEENARLAGVNVDRVKIGVFMFSALCSGFAGIMLSSRMGFVQPGLDGNGLLLDGIAAIIIGGTLILGGRGTIGGAFWGLLFIGIINNALNLLNVEDVWHQVFKGAVILAALGANWILWQSRQIEAH 161
            +G+YLS  FL+A   LA+VVYNHTR GAA+IA+GNSE+NA+LAG+NVDRVKIGVFMFS LCSGFAGIMLS+RMGFVQPGLDGNGLLLD IAAIIIGGTLI GGRGTIGGA WG+ FIGIINNALNLLNVEDVWHQVFKG VILAALG NW+LWQSRQ EAH
Sbjct:  158 LGIYLSVWFLIALGGLAYVVYNHTRIGAAIIAIGNSEDNAKLAGINVDRVKIGVFMFSGLCSGFAGIMLSTRMGFVQPGLDGNGLLLDAIAAIIIGGTLIQGGRGTIGGALWGVAFIGIINNALNLLNVEDVWHQVFKGLVILAALGVNWLLWQSRQSEAH 318

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BLAST of mRNA_M-pyrifera_M_contig122917.4703.1 vs. uniprot
Match: UPI000DF382F9 (ABC transporter permease n=1 Tax=Notoacmeibacter marinus TaxID=1876515 RepID=UPI000DF382F9)

HSP 1 Score: 268 bits (684), Expect = 1.190e-87
Identity = 128/160 (80.00%), Postives = 144/160 (90.00%), Query Frame = 0

Query:    2 GLYLSFLFLVARFVLAWVVYNHTRWGAAVIAVGNSEENARLAGVNVDRVKIGVFMFSALCSGFAGIMLSSRMGFVQPGLDGNGLLLDGIAAIIIGGTLILGGRGTIGGAFWGLLFIGIINNALNLLNVEDVWHQVFKGAVILAALGANWILWQSRQIEAH 161
            GLY SFLFL+A +  A+ VYNHTRWG+ V+A+GNSE+NA+LAG++ DRVKIGVFMFS LCSG AGI+LS+RMGFVQPGLDGNGLLLD IAAIIIGGTLILGGRGTIGGA WGLLFIG+ NNALNLLNVEDVWH VFKG +IL ALG NW+LWQSRQ+EAH
Sbjct:  159 GLYWSFLFLLALYATAYFVYNHTRWGSYVVAIGNSEQNAQLAGIDTDRVKIGVFMFSGLCSGLAGIILSTRMGFVQPGLDGNGLLLDSIAAIIIGGTLILGGRGTIGGALWGLLFIGVTNNALNLLNVEDVWHLVFKGLIILVALGINWLLWQSRQVEAH 318

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BLAST of mRNA_M-pyrifera_M_contig122917.4703.1 vs. uniprot
Match: A0A3M1ADC0_9PROT (ABC transporter permease n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1ADC0_9PROT)

HSP 1 Score: 268 bits (684), Expect = 1.910e-87
Identity = 131/156 (83.97%), Postives = 142/156 (91.03%), Query Frame = 0

Query:    2 GLYLSFLFLVARFVLAWVVYNHTRWGAAVIAVGNSEENARLAGVNVDRVKIGVFMFSALCSGFAGIMLSSRMGFVQPGLDGNGLLLDGIAAIIIGGTLILGGRGTIGGAFWGLLFIGIINNALNLLNVEDVWHQVFKGAVILAALGANWILWQSRQ 157
            G Y SFLFLVA F LA VV   TRWGA V+A+GNSEENARLAG+NVDRVKIG+FMFSALCSGFAG++LSSRMGFVQPGLDGNGLLLDGIAAI+IGGT ILGGRGT+ GAFWG+LFIGI+NNALNLLNVEDVWH VFKG VIL ALGANW+LWQSRQ
Sbjct:  174 GFYWSFLFLVALFALAHVVCTRTRWGAYVVAIGNSEENARLAGINVDRVKIGIFMFSALCSGFAGVVLSSRMGFVQPGLDGNGLLLDGIAAIVIGGTSILGGRGTVAGAFWGVLFIGIVNNALNLLNVEDVWHPVFKGGVILLALGANWLLWQSRQ 329

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BLAST of mRNA_M-pyrifera_M_contig122917.4703.1 vs. uniprot
Match: UPI000B25DE4C (ABC transporter permease n=1 Tax=Ectothiorhodospiraceae bacterium AqS1 TaxID=1725326 RepID=UPI000B25DE4C)

HSP 1 Score: 262 bits (670), Expect = 1.740e-85
Identity = 131/161 (81.37%), Postives = 145/161 (90.06%), Query Frame = 0

Query:    1 MGLYLSFLFLVARFVLAWVVYNHTRWGAAVIAVGNSEENARLAGVNVDRVKIGVFMFSALCSGFAGIMLSSRMGFVQPGLDGNGLLLDGIAAIIIGGTLILGGRGTIGGAFWGLLFIGIINNALNLLNVEDVWHQVFKGAVILAALGANWILWQSRQIEAH 161
            +G+Y+SFLFL A F LA++VYN T+ GA ++AVGNSEE A+LAG++V RVKIGVFMFSALCSGFAGIML+ RMGFVQPGLDGNGLLLDGIAAIIIGGTLILGGRGT+GGA  GLLFIGI+NNALNLLNVEDVWHQVFKG VIL ALGANWILWQSRQ E  
Sbjct:  161 LGVYISFLFLAALFALAYIVYNFTKIGAYIVAVGNSEEKAKLAGIDVVRVKIGVFMFSALCSGFAGIMLTPRMGFVQPGLDGNGLLLDGIAAIIIGGTLILGGRGTVGGALLGLLFIGIVNNALNLLNVEDVWHQVFKGLVILVALGANWILWQSRQKEVQ 321

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BLAST of mRNA_M-pyrifera_M_contig122917.4703.1 vs. uniprot
Match: U4EBB6_9VIBR (Putative Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease component n=6 Tax=Vibrio TaxID=662 RepID=U4EBB6_9VIBR)

HSP 1 Score: 258 bits (659), Expect = 7.380e-84
Identity = 121/160 (75.62%), Postives = 146/160 (91.25%), Query Frame = 0

Query:    2 GLYLSFLFLVARFVLAWVVYNHTRWGAAVIAVGNSEENARLAGVNVDRVKIGVFMFSALCSGFAGIMLSSRMGFVQPGLDGNGLLLDGIAAIIIGGTLILGGRGTIGGAFWGLLFIGIINNALNLLNVEDVWHQVFKGAVILAALGANWILWQSRQIEAH 161
            G Y+SFLFLV  + LA+VVYNHTR GA +IA+GN+EENA+L+G+NVD VK+GVF F+ LCSGFAG++LS+RMGFVQPGLDGNG+L+DGIAAIIIGGTLILGG+GTIGGAFWG+LFIG+INN+LNLLNVEDVWH VFKG+VI+AAL  NW+LWQSRQ  ++
Sbjct:  159 GFYISFLFLVLLYALAYVVYNHTRIGAYIIAIGNNEENAKLSGINVDAVKVGVFTFAGLCSGFAGLVLSTRMGFVQPGLDGNGILMDGIAAIIIGGTLILGGKGTIGGAFWGVLFIGVINNSLNLLNVEDVWHLVFKGSVIIAALALNWLLWQSRQSTSY 318

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig122917.4703.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig122917.4703.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0W7WH79_9RHOB	1.820e-101	93.79	Uncharacterized protein n=6 Tax=Roseobacteraceae T...	[more]
UPI001487E6C6	9.900e-99	88.82	ABC transporter permease n=2 Tax=Ruegeria TaxID=97...	[more]
UPI0015CDE165	1.490e-93	85.09	ABC transporter permease n=1 Tax=Jannaschia marina...	[more]
A0A1M5QIP9_9RHOB	4.110e-93	85.63	Ribose transport system permease protein n=1 Tax=C...	[more]
A0A1I6HDS5_9RHOB	3.050e-90	83.13	Ribose transport system permease protein n=2 Tax=R...	[more]
UPI0009E42312	3.630e-89	83.85	ABC transporter permease n=1 Tax=Pseudorhodobacter...	[more]
UPI000DF382F9	1.190e-87	80.00	ABC transporter permease n=1 Tax=Notoacmeibacter m...	[more]
A0A3M1ADC0_9PROT	1.910e-87	83.97	ABC transporter permease n=1 Tax=Alphaproteobacter...	[more]
UPI000B25DE4C	1.740e-85	81.37	ABC transporter permease n=1 Tax=Ectothiorhodospir...	[more]
U4EBB6_9VIBR	7.380e-84	75.63	Putative Ribose/xylose/arabinose/galactoside ABC-t...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001851	ABC transporter, permease	PFAM	PF02653	BPD_transp_2	coord: 8..146 e-value: 9.7E-27 score: 93.8
None	No IPR available	PANTHER	PTHR32196	FAMILY NOT NAMED	coord: 2..149
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..1
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 102..106
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 52..70
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 82..101
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 125..135
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 154..161
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 13..17
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 107..124
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 18..51
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 136..153
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 2..12
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..17
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 71..81
None	No IPR available	SIGNALP_EUK	SignalP-TM	SignalP-TM	coord: 1..17 score: 0.582
None	No IPR available	TMHMM	TMhelix		coord: 131..153
None	No IPR available	TMHMM	TMhelix		coord: 110..127
None	No IPR available	TMHMM	TMhelix		coord: 50..69
None	No IPR available	TMHMM	TMhelix		coord: 4..21
None	No IPR available	TMHMM	TMhelix		coord: 84..103

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig122917	contig	M-pyrifera_M_contig122917:6..491 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig122917.4703.1	mRNA_M-pyrifera_M_contig122917.4703.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig122917 3..491 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig122917.4703.1 ID=prot_M-pyrifera_M_contig122917.4703.1|Name=mRNA_M-pyrifera_M_contig122917.4703.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=162bp
MGLYLSFLFLVARFVLAWVVYNHTRWGAAVIAVGNSEENARLAGVNVDRV
KIGVFMFSALCSGFAGIMLSSRMGFVQPGLDGNGLLLDGIAAIIIGGTLI
LGGRGTIGGAFWGLLFIGIINNALNLLNVEDVWHQVFKGAVILAALGANW
ILWQSRQIEAH*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001851	ABC_transp_permease