prot_M-pyrifera_M_contig122802.4683.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig122802.4683.1
Unique Name	prot_M-pyrifera_M_contig122802.4683.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	131

Homology

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BLAST of mRNA_M-pyrifera_M_contig122802.4683.1 vs. uniprot
Match: A0A3D5DG90_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DG90_9GAMM)

HSP 1 Score: 98.6 bits (244), Expect = 4.570e-22
Identity = 59/132 (44.70%), Postives = 75/132 (56.82%), Query Frame = 0

Query:    1 KFRSSRIVTFAGLLFLLAEHGRQADGDVAWLLPHLDKTPLERVLYVFAQYDECDPTQFLSAYADVHALLSDGDIRRELIAASPRAAGD-PVQSEA-YAEIHALGARLMDELTRFALARHADWPLKIFRNWLL 130
            KFRS+R+VTFAGLLF + E    A G    L   L++TPL R+   F  Y   +   F+  Y  +H +LSD  IR EL+  SP +    PVQ    YA IH L   LM+ LT F LAR  DWP ++F +WLL
Sbjct:  209 KFRSTRVVTFAGLLFAIGE--ATASGYKTDLELELNRTPLGRIQSAFNSYPGVEFRAFIETYELLHRMLSDASIREELVRLSPISRDKVPVQYPGTYARIHDLSGELMEHLTEFILARRRDWPSQLFHSWLL 338

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig122802.4683.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig122802.4683.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A3D5DG90_9GAMM	4.570e-22	44.70	Uncharacterized protein n=1 Tax=Gammaproteobacteri...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 7..18
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..6
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 19..26
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 27..130
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..26
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..24 score: 0.624

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig122802	contig	M-pyrifera_M_contig122802:9..401 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig122802.4683.1	mRNA_M-pyrifera_M_contig122802.4683.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig122802 9..401 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig122802.4683.1 ID=prot_M-pyrifera_M_contig122802.4683.1|Name=mRNA_M-pyrifera_M_contig122802.4683.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=131bp
KFRSSRIVTFAGLLFLLAEHGRQADGDVAWLLPHLDKTPLERVLYVFAQY
DECDPTQFLSAYADVHALLSDGDIRRELIAASPRAAGDPVQSEAYAEIHA
LGARLMDELTRFALARHADWPLKIFRNWLL*