prot_M-pyrifera_M_contig122773.4674.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig122773.4674.1
Unique Name	prot_M-pyrifera_M_contig122773.4674.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	71

Homology

[Close]

BLAST of mRNA_M-pyrifera_M_contig122773.4674.1 vs. uniprot
Match: A0A2D9C4M7_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2D9C4M7_9BACT)

HSP 1 Score: 67.0 bits (162), Expect = 5.260e-13
Identity = 34/52 (65.38%), Postives = 41/52 (78.85%), Query Frame = 0

Query:    4 ETVAMPESSREKHV-RSMTFILCMGMLAGVLIWAKLRLVTDIPRSAYAEPEE 54
            ET +   S R+    RS++ +LC+G LAGVLIWAKLRLVTDIPRSAYAEP+E
Sbjct:    5 ETTSSDRSQRQSGATRSLSLLLCLGALAGVLIWAKLRLVTDIPRSAYAEPKE 56

[Close]

BLAST of mRNA_M-pyrifera_M_contig122773.4674.1 vs. uniprot
Match: A0A3M2CD87_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2CD87_9BACT)

HSP 1 Score: 62.0 bits (149), Expect = 3.870e-11
Identity = 30/44 (68.18%), Postives = 35/44 (79.55%), Query Frame = 0

Query:   10 ESSREKHVRSMTFILCMGMLAGVLIWAKLRLVTDIPRSAYAEPE 53
            ESSR++  R   F+L  G LAGVLIWAKLRLV +IPRSAYAEP+
Sbjct:    2 ESSRDRRSRQAAFVLSAGALAGVLIWAKLRLVENIPRSAYAEPD 45

[Close]

BLAST of mRNA_M-pyrifera_M_contig122773.4674.1 vs. uniprot
Match: A0A812XXM1_9DINO (XcpT protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812XXM1_9DINO)

HSP 1 Score: 61.6 bits (148), Expect = 2.010e-9
Identity = 29/42 (69.05%), Postives = 37/42 (88.10%), Query Frame = 0

Query:   14 EKHVRSMTFILCMGMLAGVLIWAKLRLVTDIPRSAYAEPEEV 55
            ++  R++TF+L +GMLAGVLIWAKLRLVTD+PRSA A P+EV
Sbjct:  329 QRRSRALTFMLSLGMLAGVLIWAKLRLVTDLPRSALAVPKEV 370

[Close]

BLAST of mRNA_M-pyrifera_M_contig122773.4674.1 vs. uniprot
Match: A0A7C5WN16_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7C5WN16_9BACT)

HSP 1 Score: 49.3 bits (116), Expect = 3.360e-6
Identity = 23/32 (71.88%), Postives = 26/32 (81.25%), Query Frame = 0

Query:   28 MLAGVLIWAKLRLVTDIPRSAYAEPEEVTADQ 59
            + AG+L W KLRLV+DIPRSAYAEP E  ADQ
Sbjct:   13 LFAGMLFWTKLRLVSDIPRSAYAEPREKQADQ 44

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig122773.4674.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig122773.4674.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A2D9C4M7_9BACT	5.260e-13	65.38	Uncharacterized protein n=1 Tax=Phycisphaerae bact...	[more]
A0A3M2CD87_9BACT	3.870e-11	68.18	Uncharacterized protein n=1 Tax=Planctomycetes bac...	[more]
A0A812XXM1_9DINO	2.010e-9	69.05	XcpT protein n=1 Tax=Symbiodinium sp. CCMP2592 Tax...	[more]
A0A7C5WN16_9BACT	3.360e-6	71.88	Uncharacterized protein n=1 Tax=Phycisphaerales ba...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..19
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 20..38
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 39..71
None	No IPR available	TMHMM	TMhelix		coord: 20..42

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig122773	contig	M-pyrifera_M_contig122773:159..371 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig122773.4674.1	mRNA_M-pyrifera_M_contig122773.4674.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig122773 159..371 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig122773.4674.1 ID=prot_M-pyrifera_M_contig122773.4674.1|Name=mRNA_M-pyrifera_M_contig122773.4674.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=71bp
MARETVAMPESSREKHVRSMTFILCMGMLAGVLIWAKLRLVTDIPRSAYA
EPEEVTADQIESTAASAHADD