prot_M-pyrifera_M_contig122764.4672.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig122764.4672.1
Unique Nameprot_M-pyrifera_M_contig122764.4672.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length175
Homology
BLAST of mRNA_M-pyrifera_M_contig122764.4672.1 vs. uniprot
Match: A0A353QZ50_9GAMM (Uncharacterized protein n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A353QZ50_9GAMM)

HSP 1 Score: 143 bits (361), Expect = 5.300e-40
Identity = 74/177 (41.81%), Postives = 111/177 (62.71%), Query Frame = 0
Query:    2 LPGATVGVEDSVTFAFTAGYMLTNHFAIELLGIWPANHDIEGEGILPGLGVSDVGDLDIFPPTLSVNYYFQPQ---ERLSPHIGFGVNSTWYWNTQASAQTKAVLGPGTDLNIDNSIGWAVNIGLDYDINDRFFATAGLWYVDIDAEASLKTTALGQLNIDVDVDPRVAMFGFGVRF 175
            +PG+ V V+D ++  F+  YM+T    +ELL   P  HDI+GEG L G+   D+G +   PPTL++ +Y  PQ   + + P+IG GVN T +++ QA    +A++G  T +++D+S G+AV +G D+ ++D  F    LWYVDI  +A+LKT   G L  DVD+DP V M G G+RF
Sbjct:   37 IPGSGVEVQDGISLGFSVTYMVTPQIGVELLAALPFKHDIKGEGSLNGV---DIGRIKHLPPTLTLQWY--PQLGVDWVQPYIGAGVNYTTFFDEQADGDLEAIVGK-TKISLDDSWGYAVELGADWAVSDNCFINTSLWYVDISTDATLKTAGAGTLKTDVDIDPLVFMLGVGMRF 207          
BLAST of mRNA_M-pyrifera_M_contig122764.4672.1 vs. uniprot
Match: A0A2S7K8S6_9PROT (Uncharacterized protein n=1 Tax=Marinicaulis flavus TaxID=2058213 RepID=A0A2S7K8S6_9PROT)

HSP 1 Score: 133 bits (334), Expect = 8.140e-36
Identity = 74/176 (42.05%), Postives = 110/176 (62.50%), Query Frame = 0
Query:    1 GLPGATVGVEDSVTFAFTAGYMLTNHFAIELLGIWPANHDIEGEGILPGLGVSDVGDLDIFPPTLSVNYYFQPQERLSPHIGFGVNSTWYWNTQASAQTKAVLGPGTDLNIDNSIGWAVNIGLDYDINDRFFATAGLWYVDIDAEASLKTTALGQLN-IDVDVDPRVAMFGFGVRF 175
            G PG +V VE++V       Y LTN+   EL+ +  + HD++G G L GLG   VGD+   PPTL++ Y+F P+ ++ P+ G GVN T +++  AS      +GP T+L++D+S+G A  +GLDY +NDR+F    + Y+ ID  A+L T   G +N +DVD+DP VA  G G+RF
Sbjct:   48 GFPGGSVNVENAVVPELDFTYFLTNNIGAELI-LATSPHDLQGTGTLSGLG--KVGDVMALPPTLTLQYHFNPEGKIRPYAGVGVNWTIFYSEDASDSLVNAIGP-TNLSLDDSVGVAYQVGLDYALNDRWFVNFDVKYIQIDTTATLNTG--GAINTVDVDLDPIVAGVGIGMRF 217          
BLAST of mRNA_M-pyrifera_M_contig122764.4672.1 vs. uniprot
Match: A0A1F3A8E2_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_63_12 TaxID=1797224 RepID=A0A1F3A8E2_9PROT)

HSP 1 Score: 132 bits (332), Expect = 1.760e-35
Identity = 69/175 (39.43%), Postives = 105/175 (60.00%), Query Frame = 0
Query:    2 LPGATVGVEDSVTFAFTAGYMLTNHFAIELLGIWPANHDIEGEGILPGLGVSDVGDLDIFPPTLSVNYYFQPQERLSPHIGFGVNSTWYWNTQASAQTKAVLGPGTDLNIDNSIGWAVNIGLDYDINDRFFATAGLWYVDIDAEASLKTTALGQLN-IDVDVDPRVAMFGFGVRF 175
            +P  +V VED++       Y  TN+ A EL+ +  + HDI G G L GL  +++ D    PPTL++ Y+F P  ++ P++G GVN T +++  + A     LG  TD+++D+S GWAV  G+D+DI +R F    + Y+DID  A+L T   G +N +DV +DP V   GFG+RF
Sbjct:   51 VPTGSVTVEDAIVPELDFTYFFTNNIAAELI-LATSPHDISGAGALSGL--NEIADTMALPPTLTLQYHFMPNAKIRPYVGAGVNWTIFYSEDSKASLDTALGGATDVSLDDSFGWAVQAGIDFDITERVFLNLDVKYIDIDTTATLDTA--GSINTVDVQIDPIVFGVGFGMRF 220          
BLAST of mRNA_M-pyrifera_M_contig122764.4672.1 vs. uniprot
Match: A0A251X7Q3_9GAMM (Uncharacterized protein n=2 Tax=Thioflexithrix psekupsensis TaxID=1570016 RepID=A0A251X7Q3_9GAMM)

HSP 1 Score: 130 bits (327), Expect = 1.260e-34
Identity = 62/175 (35.43%), Postives = 103/175 (58.86%), Query Frame = 0
Query:    2 LPGATVGVEDSVTFAFTAGYMLTNHFAIELLGIWPANHDIEGEGI-LPGLGVSDVGDLDIFPPTLSVNYYFQPQERLSPHIGFGVNSTWYWNTQASAQTKAVLGPGTDLNIDNSIGWAVNIGLDYDINDRFFATAGLWYVDIDAEASLKTTALGQLNIDVDVDPRVAMFGFGVRF 175
            +P   V V+ + T      YM+T++F +ELL   P  H +  +G  L  L   ++    + PP+L + Y+F PQ ++ P++GFG N T +++ +++A     LG   DL +D+S+GWA   G+D+D+ + +F  A + Y+DI+  AS K+ ALG + +DVD++P V   G G RF
Sbjct:   55 VPATDVSVDSAFTLDLDITYMITSNFGVELLLDIPTKHSVSSKGATLKSLAPGEILSARVLPPSLLLQYHFLPQGQIRPYVGFGANYTLFFDEESTASLNTGLGGVKDLELDSSVGWAAQAGVDFDMGNDWFLNADVKYIDINTTASFKSGALGNVEVDVDINPWVLGLGVGRRF 229          
BLAST of mRNA_M-pyrifera_M_contig122764.4672.1 vs. uniprot
Match: A0A1Y5FKW2_9GAMM (Outer membrane protein OmpW n=1 Tax=Gammaproteobacteria bacterium 53_120_T64 TaxID=1856295 RepID=A0A1Y5FKW2_9GAMM)

HSP 1 Score: 129 bits (324), Expect = 3.370e-34
Identity = 69/173 (39.88%), Postives = 97/173 (56.07%), Query Frame = 0
Query:    4 GATVGVEDSVTFAFTAGYMLTNHFAIELLGIWPANHDIEGEGILPGLGVSDVGDLDIFPPTLSVNYY-FQPQERLSPHIGFGVNSTWYWNTQASAQTKAVLGPGTDLNIDNSIGWAVNIGLDYDINDRFFATAGLWYVDIDAEASLKTTALGQLNIDVDVDPRVAMFGFGVRF 175
            G  VGV+       T  YMLT+H  I LL   P  HDI+  G+  GL   D GD    PPTL++ Y+  +P     P++G GVN T +++    +  +A LG   DL +D+SIG AV +G DY I++ +   A +WY+DID EA  K   + ++  DVD+DP V M G G +F
Sbjct:   61 GTGVGVDGDEQLGLTGTYMLTSHLGIGLLAATPFEHDIKANGL--GL---DAGDSKQLPPTLTLQYFPMEPSSAFQPYVGIGVNYTAFFDEGVDSDLEAFLGESGDLELDDSIGLAVQVGFDYAIDEHWLLNASVWYIDIDTEADFKFDTV-RIKADVDIDPWVYMVGVGYKF 227          
BLAST of mRNA_M-pyrifera_M_contig122764.4672.1 vs. uniprot
Match: A0A1G3E7J4_9GAMM (Outer membrane protein OmpW n=1 Tax=Pseudomonadales bacterium RIFCSPLOWO2_12_59_9 TaxID=1802009 RepID=A0A1G3E7J4_9GAMM)

HSP 1 Score: 127 bits (320), Expect = 1.520e-33
Identity = 67/181 (37.02%), Postives = 98/181 (54.14%), Query Frame = 0
Query:    2 LPGATVGVEDSVTFAFTAGYMLTNHFAIELLGIWPANHDIEGEGILPGLGV------SDVGDLDIFPPTLSVNYY-FQPQERLSPHIGFGVNSTWYWNTQASAQTKAVLGPGTDLNIDNSIGWAVNIGLDYDINDRFFATAGLWYVDIDAEASLKTTALGQLNIDVDVDPRVAMFGFGVRF 175
            + G + GV        T  YM+T+H  IELL   P NHDI  +GI   LG           D+   PPTLS+ YY  +      P++G G+N T +++   + + KA     ++L++DNS+G A  +G DY + D     A +WY+DID  A+   +ALG++ +DVDVDP V M G G +F
Sbjct:   54 IDGTSAGVNSDTQLGLTGTYMITDHVGIELLAATPFNHDISVKGIDAALGTPAGTIDGSFADVKQLPPTLSLQYYPMEASSAFQPYVGAGLNYTIFFDDNLTGRQKA--NGFSNLDLDNSVGLAFQVGTDYMLTDNILVNAAVWYIDIDTTATADHSALGKVKVDVDVDPFVYMVGLGYKF 232          
BLAST of mRNA_M-pyrifera_M_contig122764.4672.1 vs. uniprot
Match: A0A219B2B6_9SPHN (Uncharacterized protein n=1 Tax=Pacificimonas flava TaxID=1234595 RepID=A0A219B2B6_9SPHN)

HSP 1 Score: 127 bits (319), Expect = 1.620e-33
Identity = 65/173 (37.57%), Postives = 102/173 (58.96%), Query Frame = 0
Query:    3 PGATVGVEDSVTFAFTAGYMLTNHFAIELLGIWPANHDIEG-EGILPGLGVSDVGDLDIFPPTLSVNYYFQPQERLSPHIGFGVNSTWYWNTQASAQTKAVLGPGTDLNIDNSIGWAVNIGLDYDINDRFFATAGLWYVDIDAEASLKTTALGQLNIDVDVDPRVAMFGFGVR 174
            PG TV + D+V   F   YM T++  IEL+      H  +G  G+  GLG  D+ +  + PPT+++ Y+F P  ++ P++G G+N T++W+ +A       +GP T + + +S GWA+  G+D D+N+RFF      Y+D++ +  L TTA G   IDVDV+P V   GFG+R
Sbjct:   52 PGETVSLTDAVAPEFDLTYMATDNVGIELIAA-TTKHQADGVTGVTGGLG--DLVETWVLPPTVTLQYHFAPNSKVRPYVGAGLNYTFFWDEEAQDPLTNAVGP-TKVTLSDSFGWALQAGVDIDLNERFFLNLDAKYIDMNTDVELDTTAAGMQTIDVDVNPFVFGVGFGIR 220          
BLAST of mRNA_M-pyrifera_M_contig122764.4672.1 vs. uniprot
Match: UPI0016690956 (outer membrane beta-barrel protein n=1 Tax=Marinicella pacifica TaxID=1171543 RepID=UPI0016690956)

HSP 1 Score: 127 bits (318), Expect = 2.350e-33
Identity = 65/177 (36.72%), Postives = 107/177 (60.45%), Query Frame = 0
Query:    2 LPGATVGVEDSVTFAFTAGYMLTNHFAIELLGIWPANHDIEGEGILPGLGV---SDVGDLDIFPPTLSVNYYFQPQERLSPHIGFGVNSTWYWNTQASAQTKAVLGPGTDLNIDNSIGWAVNIGLDYDINDRFFATAGLWYVDIDAEASLKTTALGQLNIDVDVDPRVAMFGFGVRF 175
            +PG +V V+D+ +   + GYM+++H+AIELL    + H +   G L  LGV   +DV D ++ PPT+ + Y F+P   + P+ G G N T ++N + S   + VLG   +L++D+S GWA   G+D+++++ +     + Y+DI+ EA+  T ALG   +DVD++P V   GFG  F
Sbjct:   49 VPGTSVSVDDNYSLDISIGYMISDHWAIELLADLSSKHTVSAHG-LSALGVPDGTDVVDTNVLPPTVFLQYQFRPTASVRPYFGVGANYTHFFNEELSGPAQEVLG-AENLDLDSSFGWAAQFGIDWELSNNWSFNMDVKYIDINTEATFNT-ALGSAAVDVDINPTVIGIGFGKTF 222          
BLAST of mRNA_M-pyrifera_M_contig122764.4672.1 vs. uniprot
Match: A0A3B8X172_9GAMM (OmpW family protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3B8X172_9GAMM)

HSP 1 Score: 126 bits (317), Expect = 3.770e-33
Identity = 63/172 (36.63%), Postives = 102/172 (59.30%), Query Frame = 0
Query:    4 GATVGVEDSVTFAFTAGYMLTNHFAIELLGIWPANHDIEGEGILPGLGVSDVGDLDIFPPTLSVNYYFQPQERLSPHIGFGVNSTWYWNTQASAQTKAVLGPGTDLNIDNSIGWAVNIGLDYDINDRFFATAGLWYVDIDAEASLKTTALGQLNIDVDVDPRVAMFGFGVRF 175
            G   G++  V       YMLT H+ +EL+ +  + HD++ +G L GLG  ++ D    PPTL++ Y+F P  ++ P+ G G+N T +++  AS   K   G   ++++D SIG A  +G+D  + D +F    + Y+D++ +AS+ TTALG+L IDVD+DP V   G G +F
Sbjct:   59 GTKAGLDSDVVPELDFTYMLTPHWGLELI-LASSEHDVKAKGALSGLG--NIIDSRTLPPTLTLQYHFLPDNKIQPYAGIGINYTHFFSEDASTSLKTAAGGRANVDLDPSIGIAFQVGMDVALQDDWFINFDVKYIDMETDASISTTALGKLKIDVDIDPWVYGIGIGKKF 227          
BLAST of mRNA_M-pyrifera_M_contig122764.4672.1 vs. uniprot
Match: A0A1G8MP13_9PSED (Outer membrane protein n=6 Tax=Pseudomonas TaxID=286 RepID=A0A1G8MP13_9PSED)

HSP 1 Score: 126 bits (316), Expect = 5.470e-33
Identity = 67/178 (37.64%), Postives = 98/178 (55.06%), Query Frame = 0
Query:    3 PGATVGVEDSVTFAFTAGYMLTNHFAIELLGIWPANHDIEGEGILPGLGVSDVGDLDIFPPTLSVNYY-FQPQERLSPHIGFGVNSTWYWNTQASAQTKAVLGPG-TDLNIDNSIGWAVNIGLDYDINDRFFATAGLWYVDIDAEASL---KTTALGQLNIDVDVDPRVAMFGFGVRF 175
            PG    ++       T  YMLT+H  +ELL   P  H +  +G+  GL    + D+   PPTLS+ YY  +   +  P+ G GVN TW+++   S+  K   G G  DL+IDNS GWA  +G+DY + D     A +WYVDI+ +A+L      ++ +  ++VDVDP V M GFG +F
Sbjct:   55 PGTKATLDSDTQLGLTFAYMLTDHVGVELLASTPFQHTVAIKGLGAGLD-GKLADVKQLPPTLSLQYYPMEANSKFQPYAGLGVNYTWFYDENLSSDRK---GQGMNDLHIDNSWGWAGQVGMDYMLTDHVMVNAAVWYVDINTQATLDGPSALSMARTKVNVDVDPWVYMLGFGYKF 228          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122764.4672.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A353QZ50_9GAMM5.300e-4041.81Uncharacterized protein n=3 Tax=Gammaproteobacteri... [more]
A0A2S7K8S6_9PROT8.140e-3642.05Uncharacterized protein n=1 Tax=Marinicaulis flavu... [more]
A0A1F3A8E2_9PROT1.760e-3539.43Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
A0A251X7Q3_9GAMM1.260e-3435.43Uncharacterized protein n=2 Tax=Thioflexithrix pse... [more]
A0A1Y5FKW2_9GAMM3.370e-3439.88Outer membrane protein OmpW n=1 Tax=Gammaproteobac... [more]
A0A1G3E7J4_9GAMM1.520e-3337.02Outer membrane protein OmpW n=1 Tax=Pseudomonadale... [more]
A0A219B2B6_9SPHN1.620e-3337.57Uncharacterized protein n=1 Tax=Pacificimonas flav... [more]
UPI00166909562.350e-3336.72outer membrane beta-barrel protein n=1 Tax=Marinic... [more]
A0A3B8X172_9GAMM3.770e-3336.63OmpW family protein n=1 Tax=Gammaproteobacteria ba... [more]
A0A1G8MP13_9PSED5.470e-3337.64Outer membrane protein n=6 Tax=Pseudomonas TaxID=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005618Outer membrane protein, OmpWPFAMPF03922OmpWcoord: 4..175
e-value: 2.1E-35
score: 122.4
IPR005618Outer membrane protein, OmpWPANTHERPTHR36920FAMILY NOT NAMEDcoord: 5..175
NoneNo IPR availableGENE3D2.40.160.20coord: 1..175
e-value: 4.6E-46
score: 158.9
IPR011250Outer membrane protein/outer membrane enzyme PagP, beta-barrelSUPERFAMILY56925OMPA-likecoord: 5..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig122764contigM-pyrifera_M_contig122764:2..526 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig122764.4672.1mRNA_M-pyrifera_M_contig122764.4672.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig122764 2..526 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig122764.4672.1 ID=prot_M-pyrifera_M_contig122764.4672.1|Name=mRNA_M-pyrifera_M_contig122764.4672.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=175bp
GLPGATVGVEDSVTFAFTAGYMLTNHFAIELLGIWPANHDIEGEGILPGL
GVSDVGDLDIFPPTLSVNYYFQPQERLSPHIGFGVNSTWYWNTQASAQTK
AVLGPGTDLNIDNSIGWAVNIGLDYDINDRFFATAGLWYVDIDAEASLKT
TALGQLNIDVDVDPRVAMFGFGVRF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005618OMPW
IPR011250OMP/PagP_b-brl