prot_M-pyrifera_M_contig122701.4663.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig122701.4663.1
Unique Name	prot_M-pyrifera_M_contig122701.4663.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	175

Homology

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BLAST of mRNA_M-pyrifera_M_contig122701.4663.1 vs. uniprot
Match: A0A359EMM1_9GAMM (tRNA-dihydrouridine(16) synthase n=8 Tax=Halieaceae TaxID=1706372 RepID=A0A359EMM1_9GAMM)

HSP 1 Score: 361 bits (926), Expect = 3.770e-124
Identity = 171/175 (97.71%), Postives = 175/175 (100.00%), Query Frame = 0

Query:    1 AVPAHVPVTAKIRLGFEDRSPFLDNVRALADAGVNELAIHARTRSDGYKPPAWWDEIARAVALVDFPVIANGEIWSPEDSQRARSASHCEDLMLGRGVLCRPDLPRLVRAATDGVDARGLSWLDIAELLQGFAQQKQRECAERHAAGPVKQWLGYLRHYYPQAAALFADVKRLTD 175
            AVPAH+PVTAKIRLGFEDRSPFLDNVRALADAGVNELAIHARTRSDGYKPPAWWDEIARAVALVDFPVIANGEIWSPEDSQRARSASHCEDLMLGRGVLCRPDLP+LVRAATDGVDARGLSWLDIAELLQGFAQQK++ECAERHAAGPVKQWLGYLRHYYPQAAALFADVKRLTD
Sbjct:  122 AVPAHLPVTAKIRLGFEDRSPFLDNVRALADAGVNELAIHARTRSDGYKPPAWWDEIARAVALVDFPVIANGEIWSPEDSQRARSASHCEDLMLGRGVLCRPDLPKLVRAATDGVDARGLSWLDIAELLQGFAQQKRQECAERHAAGPVKQWLGYLRHYYPQAAALFADVKRLTD 296

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BLAST of mRNA_M-pyrifera_M_contig122701.4663.1 vs. uniprot
Match: A0A2E7C0P0_9GAMM (tRNA-dihydrouridine(16) synthase n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A2E7C0P0_9GAMM)

HSP 1 Score: 330 bits (845), Expect = 7.350e-112
Identity = 155/175 (88.57%), Postives = 162/175 (92.57%), Query Frame = 0

Query:    1 AVPAHVPVTAKIRLGFEDRSPFLDNVRALADAGVNELAIHARTRSDGYKPPAWWDEIARAVALVDFPVIANGEIWSPEDSQRARSASHCEDLMLGRGVLCRPDLPRLVRAATDGVDARGLSWLDIAELLQGFAQQKQRECAERHAAGPVKQWLGYLRHYYPQAAALFADVKRLTD 175
            AVP  +PVTAKIRLGFEDRSPFLDNVRALADAGV+ELA+HARTRSDGYKPPAWWDEIARAV LVDFPVIANGEIWSP+DS RAR+AS CEDLMLGRGVLCRPDLPRLVRAA DGVD   L WLDIAELLQGFAQQK+  CAERHAAGPVKQWLGYLRHYYPQAAALFAD+KRL D
Sbjct:  122 AVPPGIPVTAKIRLGFEDRSPFLDNVRALADAGVDELAVHARTRSDGYKPPAWWDEIARAVELVDFPVIANGEIWSPDDSHRARAASRCEDLMLGRGVLCRPDLPRLVRAAADGVDTPALDWLDIAELLQGFAQQKRLACAERHAAGPVKQWLGYLRHYYPQAAALFADIKRLND 296

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BLAST of mRNA_M-pyrifera_M_contig122701.4663.1 vs. uniprot
Match: A0A2N5Y1P2_9GAMM (tRNA-dihydrouridine(16) synthase n=2 Tax=Kineobactrum sediminis TaxID=1905677 RepID=A0A2N5Y1P2_9GAMM)

HSP 1 Score: 236 bits (603), Expect = 4.120e-75
Identity = 112/175 (64.00%), Postives = 128/175 (73.14%), Query Frame = 0

Query:    1 AVPAHVPVTAKIRLGFEDRSPFLDNVRALADAGVNELAIHARTRSDGYKPPAWWDEIARAVALVDFPVIANGEIWSPEDSQRARSASHCEDLMLGRGVLCRPDLPRLVRAATDGVDARGLSWLDIAELLQGFAQQKQRECAERHAAGPVKQWLGYLRHYYPQAAALFADVKRLTD 175
            AVPA VPVT KIRLGFEDRS FLDNV A+ +AG  ELAIHARTR DGY+PPAWWDEIARA  +   P+IANGEIW P+D+   + AS C DLMLGRG L RPDLPRLV+AA  G   + L WLDI  LLQ F +       +RHAA P+KQWL YLR+ YP+AA LF  +KRL D
Sbjct:  122 AVPATVPVTVKIRLGFEDRSRFLDNVVAITEAGATELAIHARTRDDGYRPPAWWDEIARAREVTSIPLIANGEIWRPQDALNCQQASRCRDLMLGRGALSRPDLPRLVKAAVAGESLQALEWLDIVPLLQRFFEVNLASYEQRHAANPLKQWLAYLRNTYPEAALLFEAIKRLHD 296

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BLAST of mRNA_M-pyrifera_M_contig122701.4663.1 vs. uniprot
Match: A0A2D8IPW9_9GAMM (tRNA-dihydrouridine(16) synthase n=2 Tax=Haliea sp. TaxID=1932666 RepID=A0A2D8IPW9_9GAMM)

HSP 1 Score: 222 bits (565), Expect = 2.910e-69
Identity = 110/176 (62.50%), Postives = 128/176 (72.73%), Query Frame = 0

Query:    1 AVPAHVPVTAKIRLGFEDRSPFLDNVRALADAGVNELAIHARTRSDGYKPPAWWDEIARA-VALVDFPVIANGEIWSPEDSQRARSASHCEDLMLGRGVLCRPDLPRLVRAATDG-VDARGLSWLDIAELLQGFAQQKQRECAER-HAAGPVKQWLGYLRHYYPQAAALFADVKRL 173
            AVP  +PVTAKIRLGFEDRSPFLDNVRA+A+AG +EL +HARTR DGY+PPAWW+EI+RA  A    P+IANGEIWS +D++R R  + C DLMLGRG LCRPDLPRLV A+  G      L+W DI  LL  F       C +R HAA P KQWL YLR YYPQAA  F ++KRL
Sbjct:  129 AVPTQIPVTAKIRLGFEDRSPFLDNVRAIAEAGASELTVHARTRRDGYRPPAWWEEISRAREAAPGLPIIANGEIWSADDARRCREVTGCSDLMLGRGALCRPDLPRLVAASLRGEAGPEPLAWRDILPLLAEFLDLNLA-CYDRGHAANPFKQWLVYLRAYYPQAARFFEEIKRL 303

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BLAST of mRNA_M-pyrifera_M_contig122701.4663.1 vs. uniprot
Match: A0A095VUP6_9GAMM (tRNA-dihydrouridine(16) synthase n=1 Tax=Pseudohaliea rubra DSM 19751 TaxID=1265313 RepID=A0A095VUP6_9GAMM)

HSP 1 Score: 221 bits (563), Expect = 4.740e-69
Identity = 104/175 (59.43%), Postives = 126/175 (72.00%), Query Frame = 0

Query:    1 AVPAHVPVTAKIRLGFEDRSPFLDNVRALADAGVNELAIHARTRSDGYKPPAWWDEIARAVALVDFPVIANGEIWSPEDSQRARSASHCEDLMLGRGVLCRPDLPRLVRAATDGVDARGLSWLDIAELLQGFAQQKQRECAERHAAGPVKQWLGYLRHYYPQAAALFADVKRLTD 175
            A+P  VP++ KIRLGFEDRSPFLD VRA++DAG  E+ +HARTR DGY+PPA+WD+IA A  +   P+IANGEIWSP D+ R ++AS C+DLMLGRG LCRPDLPRLVR A  G D   L W  + +L++ F          RHA  P+KQWL YLR YYPQAA LF  +KRL D
Sbjct:  129 ALPVDVPLSVKIRLGFEDRSPFLDVVRAISDAGAAEIVVHARTRRDGYRPPAYWDDIAGAREVTRLPLIANGEIWSPGDAARCQAASGCDDLMLGRGALCRPDLPRLVRGAARGEDLAPLPWPAVLDLVRQFFALTLASYDARHAGNPLKQWLVYLRAYYPQAALLFEHLKRLRD 303

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BLAST of mRNA_M-pyrifera_M_contig122701.4663.1 vs. uniprot
Match: B8KI32_9GAMM (tRNA-dihydrouridine(16) synthase n=1 Tax=gamma proteobacterium NOR5-3 TaxID=566466 RepID=B8KI32_9GAMM)

HSP 1 Score: 216 bits (549), Expect = 5.030e-67
Identity = 104/175 (59.43%), Postives = 126/175 (72.00%), Query Frame = 0

Query:    1 AVPAHVPVTAKIRLGFEDRSPFLDNVRALADAGVNELAIHARTRSDGYKPPAWWDEIARAVALVDFPVIANGEIWSPEDSQRARSASHCEDLMLGRGVLCRPDLPRLVRAATDGVDARGLSWLDIAELLQGFAQQKQRECAERHAAGPVKQWLGYLRHYYPQAAALFADVKRLTD 175
            AVP  VP++ KIRLGFEDR  FLD V  +  A  +EL IHARTR+DGY+PPA+WD+IA A ++ D P++ANGEIW   D+Q AR+ S   DLMLGRGVLCRPDLPRLVRAA  G++   LSW DI  LL  +          R+A  P+KQWLGYLRHYYPQAAA+FA +KR+ D
Sbjct:  122 AVPVSVPLSVKIRLGFEDRDRFLDIVSGIDAAKPSELVIHARTRADGYRPPAYWDQIALARSVTDLPLVANGEIWGVGDAQLARAKSGTPDLMLGRGVLCRPDLPRLVRAADLGLEQNALSWDDIRALLLTYLAVTLDTYDARYAVNPIKQWLGYLRHYYPQAAAMFAVIKRILD 296

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BLAST of mRNA_M-pyrifera_M_contig122701.4663.1 vs. uniprot
Match: A0A5B0X1K8_9GAMM (tRNA-dihydrouridine(16) synthase n=1 Tax=Pseudohalioglobus sp. NY5 TaxID=2606449 RepID=A0A5B0X1K8_9GAMM)

HSP 1 Score: 211 bits (538), Expect = 3.080e-65
Identity = 98/175 (56.00%), Postives = 120/175 (68.57%), Query Frame = 0

Query:    1 AVPAHVPVTAKIRLGFEDRSPFLDNVRALADAGVNELAIHARTRSDGYKPPAWWDEIARAVALVDFPVIANGEIWSPEDSQRARSASHCEDLMLGRGVLCRPDLPRLVRAATDGVDARGLSWLDIAELLQGFAQQKQRECAERHAAGPVKQWLGYLRHYYPQAAALFADVKRLTD 175
            AVP  VPVT K RLG+E    FLD +R +ADAG  E+ +HART+  GY+PPA+W+EIARA  +V  P+IANGEIWS ED+ R R  S C+DLMLGRG LCRPDLPRLVRA+  G     L+W ++ ELL  + +         +A  P+KQWL YLR YYPQAA LF  +KRL D
Sbjct:  129 AVPEAVPVTVKTRLGYEHHEQFLDIIRGIADAGATEITVHARTKRHGYRPPAYWEEIARAREVVSLPLIANGEIWSAEDALRCREVSGCDDLMLGRGALCRPDLPRLVRASAAGASMPALAWPEVLELLMRYFRLTLMHYDAGYAGNPIKQWLVYLRTYYPQAALLFESIKRLRD 303

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BLAST of mRNA_M-pyrifera_M_contig122701.4663.1 vs. uniprot
Match: A0A2N5YGF2_9GAMM (tRNA-dihydrouridine(16) synthase n=2 Tax=Halioglobus TaxID=1217416 RepID=A0A2N5YGF2_9GAMM)

HSP 1 Score: 210 bits (534), Expect = 1.270e-64
Identity = 96/173 (55.49%), Postives = 118/173 (68.21%), Query Frame = 0

Query:    1 AVPAHVPVTAKIRLGFEDRSPFLDNVRALADAGVNELAIHARTRSDGYKPPAWWDEIARAVALVDFPVIANGEIWSPEDSQRARSASHCEDLMLGRGVLCRPDLPRLVRAATDGVDARGLSWLDIAELLQGFAQQKQRECAERHAAGPVKQWLGYLRHYYPQAAALFADVKRL 173
            AVP+HVP+T K RLG+ED   F D VR + +AG  EL +HART+  GY+PPA+W+EIA A  L+D P+IANGEIWSPED+QR R  S C+DLMLGRG LCRPDLP ++RA  +G  A  L W  +  L+ G+          R    P+KQWL YLR YYPQAA LF  +KRL
Sbjct:  129 AVPSHVPLTVKTRLGYEDSQLFKDIVRGIGEAGATELTVHARTKRHGYRPPAYWEEIATARELLDIPIIANGEIWSPEDAQRCREVSGCDDLMLGRGALCRPDLPAIIRALDNGEPAHALRWEHVLLLVSGYLDATIEAYDARCVGNPIKQWLVYLRCYYPQAAVLFERIKRL 301

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BLAST of mRNA_M-pyrifera_M_contig122701.4663.1 vs. uniprot
Match: A0A4V2SC11_9GAMM (tRNA-dihydrouridine(16) synthase n=2 Tax=Chromatocurvus halotolerans TaxID=1132028 RepID=A0A4V2SC11_9GAMM)

HSP 1 Score: 210 bits (534), Expect = 1.900e-64
Identity = 96/175 (54.86%), Postives = 123/175 (70.29%), Query Frame = 0

Query:    1 AVPAHVPVTAKIRLGFEDRSPFLDNVRALADAGVNELAIHARTRSDGYKPPAWWDEIARAVALVDFPVIANGEIWSPEDSQRARSASHCEDLMLGRGVLCRPDLPRLVRAATDGVDARGLSWLDIAELLQGFAQQKQRECAERHAAGPVKQWLGYLRHYYPQAAALFADVKRLTD 175
            A+PA  P+T K+RLGF+DRS F + + A++DAG +E+ IHARTR DGY+PPA+W EI RA A  + P++ANGEIWSP+D+ R R AS   DLMLGRG LCRPDLPRLVR+   G     ++W D+  LL+ F +   +    R+A  P+KQWL YLR YYPQ A LF  +KRL D
Sbjct:  148 ALPAATPLTVKVRLGFDDRSTFTEVISAISDAGASEIVIHARTRRDGYRPPAYWGEIERARACTELPLVANGEIWSPDDAVRCREASGSSDLMLGRGALCRPDLPRLVRSVDRGDPLAPMAWSDVRPLLRHFFELTLQGYDARYAGNPLKQWLVYLRSYYPQGAVLFESIKRLHD 322

[Close]

BLAST of mRNA_M-pyrifera_M_contig122701.4663.1 vs. uniprot
Match: A0A6C0U665_9GAMM (tRNA-dihydrouridine(16) synthase n=2 Tax=Kineobactrum salinum TaxID=2708301 RepID=A0A6C0U665_9GAMM)

HSP 1 Score: 209 bits (531), Expect = 2.710e-64
Identity = 101/175 (57.71%), Postives = 119/175 (68.00%), Query Frame = 0

Query:    1 AVPAHVPVTAKIRLGFEDRSPFLDNVRALADAGVNELAIHARTRSDGYKPPAWWDEIARAVALVDFPVIANGEIWSPEDSQRARSASHCEDLMLGRGVLCRPDLPRLVRAATDGVDARGLSWLDIAELLQGFAQQKQRECAERHAAGPVKQWLGYLRHYYPQAAALFADVKRLTD 175
            AV    PV+ KIRLGFEDRS FLDNV A+A+AG  EL IHART+ DGY+PPA+W+EIA A   V  P+IANGEIWSP+ ++R R  S CEDLMLGRG LCRPDLPRL+  A  G  A  L+W DI  LL+ F           +   P+KQWL YLR Y+PQ A LF  +KRL D
Sbjct:  122 AVDPATPVSVKIRLGFEDRSRFLDNVAAVAEAGAAELVIHARTKRDGYRPPAYWEEIAVARDTVKLPIIANGEIWSPDQARRCRELSGCEDLMLGRGALCRPDLPRLIAGAAQGQAAPPLTWDDILPLLRRFLALNLARYDHHYVGNPLKQWLLYLRSYFPQGAVLFEALKRLQD 296

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig122701.4663.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig122701.4663.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A359EMM1_9GAMM	3.770e-124	97.71	tRNA-dihydrouridine(16) synthase n=8 Tax=Halieacea...	[more]
A0A2E7C0P0_9GAMM	7.350e-112	88.57	tRNA-dihydrouridine(16) synthase n=1 Tax=Haliea sp...	[more]
A0A2N5Y1P2_9GAMM	4.120e-75	64.00	tRNA-dihydrouridine(16) synthase n=2 Tax=Kineobact...	[more]
A0A2D8IPW9_9GAMM	2.910e-69	62.50	tRNA-dihydrouridine(16) synthase n=2 Tax=Haliea sp...	[more]
A0A095VUP6_9GAMM	4.740e-69	59.43	tRNA-dihydrouridine(16) synthase n=1 Tax=Pseudohal...	[more]
B8KI32_9GAMM	5.030e-67	59.43	tRNA-dihydrouridine(16) synthase n=1 Tax=gamma pro...	[more]
A0A5B0X1K8_9GAMM	3.080e-65	56.00	tRNA-dihydrouridine(16) synthase n=1 Tax=Pseudohal...	[more]
A0A2N5YGF2_9GAMM	1.270e-64	55.49	tRNA-dihydrouridine(16) synthase n=2 Tax=Halioglob...	[more]
A0A4V2SC11_9GAMM	1.900e-64	54.86	tRNA-dihydrouridine(16) synthase n=2 Tax=Chromatoc...	[more]
A0A6C0U665_9GAMM	2.710e-64	57.71	tRNA-dihydrouridine(16) synthase n=2 Tax=Kineobact...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001269	tRNA-dihydrouridine synthase	PFAM	PF01207	Dus	coord: 5..138 e-value: 3.4E-26 score: 92.1
IPR042270	tRNA-dihydrouridine(16) synthase, C-terminal	GENE3D	1.20.225.30		coord: 119..175 e-value: 4.5E-11 score: 44.4
IPR013785	Aldolase-type TIM barrel	GENE3D	3.20.20.70		coord: 1..112 e-value: 1.8E-30 score: 108.2
None	No IPR available	PANTHER	PTHR11082	TRNA-DIHYDROURIDINE SYNTHASE	coord: 1..174
None	No IPR available	SUPERFAMILY	51395	FMN-linked oxidoreductases	coord: 3..168
IPR032886	tRNA-dihydrouridine(16) synthase	PANTHER	PTHR11082:SF26	TRNA-DIHYDROURIDINE(16) SYNTHASE	coord: 1..174

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig122701	contig	M-pyrifera_M_contig122701:3..527 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig122701.4663.1	mRNA_M-pyrifera_M_contig122701.4663.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig122701 3..527 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig122701.4663.1 ID=prot_M-pyrifera_M_contig122701.4663.1|Name=mRNA_M-pyrifera_M_contig122701.4663.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=175bp
AVPAHVPVTAKIRLGFEDRSPFLDNVRALADAGVNELAIHARTRSDGYKP
PAWWDEIARAVALVDFPVIANGEIWSPEDSQRARSASHCEDLMLGRGVLC
RPDLPRLVRAATDGVDARGLSWLDIAELLQGFAQQKQRECAERHAAGPVK
QWLGYLRHYYPQAAALFADVKRLTD

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001269	tRNA_hU_synthase
IPR042270	DusC_C
IPR013785	Aldolase_TIM
IPR032886	DusC