prot_M-pyrifera_M_contig12267.4659.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12267.4659.1
Unique Nameprot_M-pyrifera_M_contig12267.4659.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length170
Homology
BLAST of mRNA_M-pyrifera_M_contig12267.4659.1 vs. uniprot
Match: D8LCL4_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL4_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 6.800e-28
Identity = 63/108 (58.33%), Postives = 74/108 (68.52%), Query Frame = 0
Query:   60 LILSVYPDHLLEANHNTYNDRGILVPTNVNIDHIHHFIPDKIPGRGHHLPSTDKIITDHENMPDVVSVEYLNSVQVPGTPPHDLHLKIGALFAFVGNIKFDSGLVNGK 167
            L+ SV   + L A  +T  DRGIL PT+ +ID IH FI  K+PG  H   S+DKI+ D ENMPDV SVEYLN +  PGTPPH L+LK GAL  F+ NI FD GLVNGK
Sbjct:  538 LVQSVPTSYELTAT-STTTDRGILAPTSDDIDQIHDFILRKMPGNVHEQLSSDKIVKDDENMPDVASVEYLNIINAPGTPPHKLNLKGGALIFFIRNIDFDCGLVNGK 644          
BLAST of mRNA_M-pyrifera_M_contig12267.4659.1 vs. uniprot
Match: D7G7Y0_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Y0_ECTSI)

HSP 1 Score: 73.2 bits (178), Expect = 2.340e-14
Identity = 32/49 (65.31%), Postives = 37/49 (75.51%), Query Frame = 0
Query:  121 MPDVVSVEYLNSVQVPGTPPHDLHLKIGALFAFVGNIKFDSGLVNGKNE 169
            MPD+VS+EYLNS+ VPGTPPH  +LK GAL  F+ NI FD G VNG  E
Sbjct:    1 MPDIVSLEYLNSINVPGTPPHKFNLKFGALIFFIRNINFDCGPVNGNGE 49          
BLAST of mRNA_M-pyrifera_M_contig12267.4659.1 vs. uniprot
Match: A0A226EYJ4_FOLCA (ATP-dependent DNA helicase n=2 Tax=Folsomia candida TaxID=158441 RepID=A0A226EYJ4_FOLCA)

HSP 1 Score: 77.0 bits (188), Expect = 2.850e-13
Identity = 39/109 (35.78%), Postives = 61/109 (55.96%), Query Frame = 0
Query:   58 EQLILSVYPDHLLEANHNTYNDRGILVPTNVNIDHIHHFIPDKIPGRGHHLPSTDKIITDHENMPDVVSVEYLNSVQVPGTPPHDLHLKIGALFAFVGNIKFDSGLVNG 166
            + ++  ++ D L   N  T++ R IL PTN ++D  +  + D + G      STD ++TD ++  D   VE+LNS+   G PPH+L LK+GAL   + N+    GL NG
Sbjct:  987 DNIVRDIFEDSLTPENVETFSSRAILCPTNADVDKSNDQVLDILIGDNKTYISTDSLMTDVDSDRDDYPVEFLNSLNPSGMPPHELKLKVGALIILLRNLNTKRGLCNG 1095          
BLAST of mRNA_M-pyrifera_M_contig12267.4659.1 vs. uniprot
Match: UPI0007EF5799 (uncharacterized protein LOC108222035 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EF5799)

HSP 1 Score: 76.6 bits (187), Expect = 3.910e-13
Identity = 44/113 (38.94%), Postives = 62/113 (54.87%), Query Frame = 0
Query:   58 EQLILSVYPDHLLEANHNTY-NDRGILVPTNVNIDHIHHFIPDKIPGRGHHLPSTDKIITDHENMPDVVS---VEYLNSVQVPGTPPHDLHLKIGALFAFVGNIKFDSGLVNG 166
            E +I S+YPD +  A +  Y ++R IL PTN  + H++  I + IPG   +  S D          D+ S   +EYLNS+QVPG P HDL LK+G +   + N+    GL NG
Sbjct: 1429 ENMIRSIYPDFIQNARNPKYLSERAILTPTNQTVGHLNSLIVEMIPGDAVNYYSVDSAEDFGGTDADLQSAFPIEYLNSLQVPGMPSHDLKLKVGTVVMLMRNLNQTLGLCNG 1541          
BLAST of mRNA_M-pyrifera_M_contig12267.4659.1 vs. uniprot
Match: UPI0007EF815C (uncharacterized protein LOC108221374 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EF815C)

HSP 1 Score: 75.9 bits (185), Expect = 7.230e-13
Identity = 41/120 (34.17%), Postives = 61/120 (50.83%), Query Frame = 0
Query:   51 VEGATDFEQLILSVYPDHLLEANHNTY-NDRGILVPTNVNIDHIHHFIPDKIPGRG---HHLPSTDKIITDHENMPDVVSVEYLNSVQVPGTPPHDLHLKIGALFAFVGNIKFDSGLVNG 166
            +E     E +I S +PD L       Y + R IL PTN  + H++  I DK+PG     + + S ++     E++      EYLNS+ +PG PPH L LK+G +   + N+    GL NG
Sbjct: 1431 IEKQNSVENMISSTFPDFLQHCQDPKYLSRRAILTPTNQTVSHLNSLIVDKLPGESLSYYSVDSAEEFGGTEEDLNHAFPNEYLNSINIPGMPPHQLKLKVGVVVMLMRNLNQTLGLCNG 1550          
BLAST of mRNA_M-pyrifera_M_contig12267.4659.1 vs. uniprot
Match: UPI0007EF4232 (uncharacterized protein LOC108207676 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EF4232)

HSP 1 Score: 75.9 bits (185), Expect = 7.250e-13
Identity = 46/140 (32.86%), Postives = 71/140 (50.71%), Query Frame = 0
Query:   39 VTNEDGFQTTSSV-------EGATDFEQLILSVYPDHLLEANHNTY-NDRGILVPTNVNIDHIHHFIPDKIPGRGHHLPSTDKII----TDHENMPDVVSVEYLNSVQVPGTPPHDLHLKIGALFAFVGNIKFDSGLVNG 166
            VTN +G     ++       +G    +Q+I S +PD L    ++ Y ++R IL PTN  + H++  I +KIPG  H   S D       T+ + M      EY+NS+ +PG P H+L LK+G +   + N+    GL NG
Sbjct: 1482 VTNAEGSNNQIAIPEEFCNLQGENTVDQMIESTFPDFLQNYQNSDYLSERAILTPTNQTVGHVNSLIVEKIPGEIHSYFSVDTAEDFPGTERDQMQSFPP-EYMNSINIPGLPLHELKLKVGVVVMLIRNLNQTLGLCNG 1620          
BLAST of mRNA_M-pyrifera_M_contig12267.4659.1 vs. uniprot
Match: UPI0007EEFFDD (ATP-dependent DNA helicase PIF1-like n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EEFFDD)

HSP 1 Score: 73.6 bits (179), Expect = 2.140e-12
Identity = 37/117 (31.62%), Postives = 65/117 (55.56%), Query Frame = 0
Query:   54 ATDFEQLILSVYPDHLLEANHNTY-NDRGILVPTNVNIDHIHHFIPDKIPGRG---HHLPSTDKIITDHENMPDVVSVEYLNSVQVPGTPPHDLHLKIGALFAFVGNIKFDSGLVNG 166
            A   ++++ S +P+ +      +Y ++R IL PTN  + H++  I DK+PG     + + S ++     +++     +EYLNS+ VPG PPH+L LK+G +   + N+    GL NG
Sbjct:   70 ANSIDKMVESTFPNFIANCRDPSYLSERAILTPTNQTVSHLNIVIVDKLPGESVSYYSVDSAEEFGGSDDDLKSAFPLEYLNSLFVPGMPPHELKLKVGVVVMLMRNLNQTLGLCNG 186          
BLAST of mRNA_M-pyrifera_M_contig12267.4659.1 vs. uniprot
Match: UPI0007F0468D (ATP-dependent DNA helicase PIF1-like n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F0468D)

HSP 1 Score: 73.9 bits (180), Expect = 2.560e-12
Identity = 40/121 (33.06%), Postives = 62/121 (51.24%), Query Frame = 0
Query:   51 VEGATDFEQLILSVYPDHLLEANHNTY-NDRGILVPTNVNIDHIHHFIPDKIPGRG---HHLPSTDKIITDHENMPDVVSVEYLNSVQVPGTPPHDLHLKIGALFAFVGNIKFDSGLVNGK 167
            +E     E +I ++YPD +  A    Y + R IL PTN  + H++  I + IPG     + + S +      E++     +EYLNS+ +PG P HDL LK G +   + N+    GL NG+
Sbjct:  178 LENDNSVENMITNIYPDFVKNAKDPKYLSQRAILTPTNQTVGHLNSLIVEMIPGESTTYYSVDSAEDFGGTDEDLHSAFPIEYLNSLNIPGLPAHDLKLKPGVVVLLMRNLNQTLGLCNGR 298          
BLAST of mRNA_M-pyrifera_M_contig12267.4659.1 vs. uniprot
Match: UPI0007EFD34A (ATP-dependent DNA helicase pfh1-like n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EFD34A)

HSP 1 Score: 73.9 bits (180), Expect = 2.580e-12
Identity = 36/113 (31.86%), Postives = 62/113 (54.87%), Query Frame = 0
Query:   58 EQLILSVYPDHLLEANHNTY-NDRGILVPTNVNIDHIHHFIPDKIPGRG---HHLPSTDKIITDHENMPDVVSVEYLNSVQVPGTPPHDLHLKIGALFAFVGNIKFDSGLVNG 166
            + +I S +PD +       Y ++R IL PTN  + H++  I +K+PG     + + S ++     E++     +EYLNS+ +PG PPH++ LK+G +   + N+    GL NG
Sbjct:  225 DNMIESTFPDFVANCTDPKYLSERAILTPTNQTVSHLNSLIVEKLPGESVSYYSVDSAEEFGGTDEDLNSAFPIEYLNSINLPGMPPHEIKLKVGVVVMLMRNLNQTLGLCNG 337          
BLAST of mRNA_M-pyrifera_M_contig12267.4659.1 vs. uniprot
Match: UPI0007EFA05D (ATP-dependent DNA helicase RRM3-like n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EFA05D)

HSP 1 Score: 73.9 bits (180), Expect = 2.860e-12
Identity = 43/113 (38.05%), Postives = 61/113 (53.98%), Query Frame = 0
Query:   58 EQLILSVYPDHLLEANHNTY-NDRGILVPTNVNIDHIHHFIPDKIPGRGHHLPSTDKIITDHENMPDVVS---VEYLNSVQVPGTPPHDLHLKIGALFAFVGNIKFDSGLVNG 166
            E +I S+YPD +  A +  Y ++R IL PTN  + H++  I + I G   +  S D          D+ S   +EYLNS+QVPG P HDL LK+G +   + N+    GL NG
Sbjct:  281 ENMICSIYPDFIQNARNPKYLSERAILTPTNQTVGHLNSLIVEMISGDAVNYYSVDSAEDFGGTDADLQSAFPIEYLNSLQVPGMPSHDLKLKVGTVVMLMRNLNQTLGLCNG 393          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12267.4659.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCL4_ECTSI6.800e-2858.33ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
D7G7Y0_ECTSI2.340e-1465.31ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
A0A226EYJ4_FOLCA2.850e-1335.78ATP-dependent DNA helicase n=2 Tax=Folsomia candid... [more]
UPI0007EF57993.910e-1338.94uncharacterized protein LOC108222035 n=1 Tax=Daucu... [more]
UPI0007EF815C7.230e-1334.17uncharacterized protein LOC108221374 n=1 Tax=Daucu... [more]
UPI0007EF42327.250e-1332.86uncharacterized protein LOC108207676 n=1 Tax=Daucu... [more]
UPI0007EEFFDD2.140e-1231.62ATP-dependent DNA helicase PIF1-like n=1 Tax=Daucu... [more]
UPI0007F0468D2.560e-1233.06ATP-dependent DNA helicase PIF1-like n=1 Tax=Daucu... [more]
UPI0007EFD34A2.580e-1231.86ATP-dependent DNA helicase pfh1-like n=1 Tax=Daucu... [more]
UPI0007EFA05D2.860e-1238.05ATP-dependent DNA helicase RRM3-like n=2 Tax=Daucu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010285DNA helicase Pif1-likePFAMPF05970PIF1coord: 56..167
e-value: 3.6E-19
score: 69.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12267contigM-pyrifera_M_contig12267:3111..3620 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12267.4659.1mRNA_M-pyrifera_M_contig12267.4659.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12267 2799..4152 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12267.4659.1 ID=prot_M-pyrifera_M_contig12267.4659.1|Name=mRNA_M-pyrifera_M_contig12267.4659.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=170bp
METKMTSHSQKQCWRLARGKIELVFLPDGTPAVALQHSVTNEDGFQTTSS
VEGATDFEQLILSVYPDHLLEANHNTYNDRGILVPTNVNIDHIHHFIPDK
IPGRGHHLPSTDKIITDHENMPDVVSVEYLNSVQVPGTPPHDLHLKIGAL
FAFVGNIKFDSGLVNGKNE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010285DNA_helicase_pif1-like