prot_M-pyrifera_M_contig12165.4453.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12165.4453.1
Unique Nameprot_M-pyrifera_M_contig12165.4453.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length224
Homology
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BLAST of mRNA_M-pyrifera_M_contig12165.4453.1 vs. uniprot
Match: D7FXP8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXP8_ECTSI)

HSP 1 Score: 221 bits (564), Expect = 7.270e-64
Identity = 138/224 (61.61%), Postives = 149/224 (66.52%), Query Frame = 0 
Query:    1 TTYRDWERIDNLRIDKYYTLVRMFLREVLLFCRIPAPPSAAMKANAPSSPKPAGRKSKXXXXXXXXXXXXXXXXXXXAVESCEASLIGEAGWDLGLLRAMSDVMEEEIVTLHPAPIGLRLHLADVWTDEALAAGGEDMPTEAFLVALAPWLRAAAAPDTNAVVFKRTFEGVFEGLLGCFAEKGQEGGEGMEXXXXXXXXXKKVFKKVDLSRVQACLFEVAAAPQ 224
            T  RDWERIDNLRIDKYYTLVR+F+RE L FC +P PP+          PK                XXXXXXXX    E  E S      WDLGLL AMSDVME E++TL PAPIGLRLHLADVW +EA  AGG DMPTEAFLVALAPWLR AA P+TN VVF+RTFEGVFEGLLG F E      +GME         KKVF  V+L RVQACLFEVAAAPQ
Sbjct:  125 TMQRDWERIDNLRIDKYYTLVRVFVREALAFCCLP-PPAVE------GQPK---------------QXXXXXXXXNSPAEEAETSAKAGGVWDLGLLGAMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGGADMPTEAFLVALAPWLRVAAEPETNPVVFRRTFEGVFEGLLGLFPEDK----DGMEEEEEE----KKVFAAVELDRVQACLFEVAAAPQ 318
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12165.4453.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FXP8_ECTSI7.270e-6461.61Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 58..85
IPR010301Nucleolar, Nop52PFAMPF05997Nop52coord: 3..172
e-value: 1.5E-13
score: 51.1
IPR010301Nucleolar, Nop52PANTHERPTHR13026NNP-1 PROTEIN NOVEL NUCLEAR PROTEIN 1 NOP52coord: 3..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12165contigM-pyrifera_M_contig12165:324..995 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12165.4453.1mRNA_M-pyrifera_M_contig12165.4453.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12165 324..995 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12165.4453.1 ID=prot_M-pyrifera_M_contig12165.4453.1|Name=mRNA_M-pyrifera_M_contig12165.4453.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=224bp
TTYRDWERIDNLRIDKYYTLVRMFLREVLLFCRIPAPPSAAMKANAPSSP
KPAGRKSKNKKRKSSSSAENEKEEKEEAVESCEASLIGEAGWDLGLLRAM
SDVMEEEIVTLHPAPIGLRLHLADVWTDEALAAGGEDMPTEAFLVALAPW
LRAAAAPDTNAVVFKRTFEGVFEGLLGCFAEKGQEGGEGMEVEEEEEEQE
KKVFKKVDLSRVQACLFEVAAAPQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010301Nop52