prot_M-pyrifera_M_contig120896.4299.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig120896.4299.1
Unique Nameprot_M-pyrifera_M_contig120896.4299.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length48
Homology
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BLAST of mRNA_M-pyrifera_M_contig120896.4299.1 vs. uniprot
Match: A0A6H5JAV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAV0_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 3.850e-12
Identity = 29/46 (63.04%), Postives = 34/46 (73.91%), Query Frame = 0 
Query:    1 FRCRVKGGHPSMTCEQYETRRRHEDVYQCPGCRVYVVKGDGETALS 46
            + CRV GGH   TCEQYE  R H+DV +CPGC VYVVKGDG  ++S
Sbjct:  136 YPCRVVGGHHPQTCEQYEAGRGHQDVCKCPGCGVYVVKGDGCDSIS 181
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BLAST of mRNA_M-pyrifera_M_contig120896.4299.1 vs. uniprot
Match: D7G6K5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6K5_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 3.850e-12
Identity = 29/46 (63.04%), Postives = 34/46 (73.91%), Query Frame = 0 
Query:    1 FRCRVKGGHPSMTCEQYETRRRHEDVYQCPGCRVYVVKGDGETALS 46
            + CRV GGH   TCEQYE  R H+DV +CPGC VYVVKGDG  ++S
Sbjct:  322 YPCRVVGGHHPQTCEQYEAGRGHQDVCKCPGCGVYVVKGDGCDSIS 367
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120896.4299.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JAV0_9PHAE3.850e-1263.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G6K5_ECTSI3.850e-1263.04Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig120896contigM-pyrifera_M_contig120896:324..467 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig120896.4299.1mRNA_M-pyrifera_M_contig120896.4299.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig120896 324..467 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig120896.4299.1 ID=prot_M-pyrifera_M_contig120896.4299.1|Name=mRNA_M-pyrifera_M_contig120896.4299.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=48bp
FRCRVKGGHPSMTCEQYETRRRHEDVYQCPGCRVYVVKGDGETALSTF
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