prot_M-pyrifera_M_contig120653.4254.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig120653.4254.1
Unique Nameprot_M-pyrifera_M_contig120653.4254.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length158
Homology
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BLAST of mRNA_M-pyrifera_M_contig120653.4254.1 vs. uniprot
Match: A0A081SII0_9BACT (Por_Secre_tail domain-containing protein n=1 Tax=Candidatus Thermochlorobacteriaceae bacterium GBChlB TaxID=1519464 RepID=A0A081SII0_9BACT)

HSP 1 Score: 59.3 bits (142), Expect = 2.880e-7
Identity = 48/130 (36.92%), Postives = 73/130 (56.15%), Query Frame = 0 
Query:    1 PASDDPVVVCGGNTVTITT--TTGLNASAIEIAGTLTSQVANL--STIGNIDGTGSLAFNTITSTPIFGAMSGT-FIGASGGTVDYGGGGAYTLP-TQSTYNNLTISNANTTTLGANV--TVNGDATFNG 122
            P  D+PV++    T+T+T    T + ++ I+  GTLT Q      ++ G + G G L   T  +   F   + T F+G +GGTV+YGG  +YTLP T STY NL IS + +T   A+V  +++G+ T  G
Sbjct: 1247 PGIDNPVIIGSNGTITVTNGAATAVPSTTIQATGTLTFQGTGFPATSFGTVSGEGLLRITTNDNPAPFPVGTFTSFLGTTGGTVEYGGSFSYTLPATVSTYRNLIISGSGSTKTFADVGLSISGNLTVQG 1376
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120653.4254.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A081SII0_9BACT2.880e-736.92Por_Secre_tail domain-containing protein n=1 Tax=C... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig120653contigM-pyrifera_M_contig120653:9..482 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig120653.4254.1mRNA_M-pyrifera_M_contig120653.4254.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig120653 9..482 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig120653.4254.1 ID=prot_M-pyrifera_M_contig120653.4254.1|Name=mRNA_M-pyrifera_M_contig120653.4254.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=158bp
PASDDPVVVCGGNTVTITTTTGLNASAIEIAGTLTSQVANLSTIGNIDGT
GSLAFNTITSTPIFGAMSGTFIGASGGTVDYGGGGAYTLPTQSTYNNLTI
SNANTTTLGANVTVNGDATFNGSRVDMSTFTLSNADNGGTFTLGSGTTLR
VEGPSNFP
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