prot_M-pyrifera_M_contig119875.4106.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig119875.4106.1
Unique Nameprot_M-pyrifera_M_contig119875.4106.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length179
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig119875.4106.1 vs. uniprot
Match: UPI001EB03BC4 (uncharacterized protein LOC124148372 n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB03BC4)

HSP 1 Score: 68.2 bits (165), Expect = 2.570e-10
Identity = 43/145 (29.66%), Postives = 73/145 (50.34%), Query Frame = 0 
Query:   38 LELAVVMDGTMSMRKHFESFHASLTTAMSWIKDAVGDHATVKWAVVVYTDFPKKANIGLGEFAAETLCDFETDTSRVASIVEAYKGATG---YDWAEDFQSGVQQALDLSWTEHSLKVFIGVLDAPPHGIGNEKHDNYPQGSPTG 179
            L+LA V+D T+SM+K+ ++  A++   +   K    +   V+ A++ Y D          EF    + DF +    + S ++  K  T     D  E    G+ +  +L+W + + K+ + V DAPPHG+G +  DNYP+G P G
Sbjct:    4 LDLAFVLDCTVSMKKYIDAAKANIKRIVD--KIVASEKRDVRLALIQYRDHFSPWR----EFDTVRVRDFTSSVLTMKSWLDVCKAVTEGNIIDAPEAVADGLHELTNLTWRKDATKIAVLVCDAPPHGLGGDG-DNYPKGCPRG 141
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119875.4106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI001EB03BC42.570e-1029.66uncharacterized protein LOC124148372 n=1 Tax=Halio... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47763FAMILY NOT NAMEDcoord: 37..179
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 40..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig119875contigM-pyrifera_M_contig119875:6..542 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig119875.4106.1mRNA_M-pyrifera_M_contig119875.4106.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig119875 6..542 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig119875.4106.1 ID=prot_M-pyrifera_M_contig119875.4106.1|Name=mRNA_M-pyrifera_M_contig119875.4106.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=179bp
MGIGWKGSSTHRHRGGGGEGLSGGDDTPKGFDTARPVLELAVVMDGTMSM
RKHFESFHASLTTAMSWIKDAVGDHATVKWAVVVYTDFPKKANIGLGEFA
AETLCDFETDTSRVASIVEAYKGATGYDWAEDFQSGVQQALDLSWTEHSL
KVFIGVLDAPPHGIGNEKHDNYPQGSPTG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036465vWFA_dom_sf