prot_M-pyrifera_M_contig118878.3875.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig118878.3875.1
Unique Nameprot_M-pyrifera_M_contig118878.3875.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length97
Homology
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BLAST of mRNA_M-pyrifera_M_contig118878.3875.1 vs. uniprot
Match: A0A0R3W2M7_TAEAS (Uncharacterized protein n=1 Tax=Taenia asiatica TaxID=60517 RepID=A0A0R3W2M7_TAEAS)

HSP 1 Score: 51.2 bits (121), Expect = 2.620e-5
Identity = 30/82 (36.59%), Postives = 47/82 (57.32%), Query Frame = 0 
Query:    2 VAKRLGIHAPLAMVGWK-HVSGWMSVPELRGAVVIEEVKETLLSAYYKDTLDKAYSKAHKKRQALVLRWRKMARRLLTFEQL 82
            +AKRLGI A  AMVGW  H +GW   PE  G VV  EV   L+ A+  + +  A + A  + +  +  W+++ R LL ++++
Sbjct:  640 IAKRLGIDAVPAMVGWTFHKAGWAH-PEYDGFVVCREVLPVLVDAWRAERMSAAAAAAADRTERALANWKRVTRNLLLWQRI 720
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118878.3875.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A0R3W2M7_TAEAS2.620e-536.59Uncharacterized protein n=1 Tax=Taenia asiatica Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12135:SF0DNA REPAIR PROTEIN COMPLEMENTING XP-C CELLScoord: 1..87
IPR004583DNA repair protein Rad4PANTHERPTHR12135DNA REPAIR PROTEIN XP-C / RAD4coord: 1..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig118878contigM-pyrifera_M_contig118878:82..372 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig118878.3875.1mRNA_M-pyrifera_M_contig118878.3875.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig118878 82..372 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig118878.3875.1 ID=prot_M-pyrifera_M_contig118878.3875.1|Name=mRNA_M-pyrifera_M_contig118878.3875.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=97bp
KVAKRLGIHAPLAMVGWKHVSGWMSVPELRGAVVIEEVKETLLSAYYKDT
LDKAYSKAHKKRQALVLRWRKMARRLLTFEQLRQETGAADDGKLLAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004583DNA_repair_Rad4