prot_M-pyrifera_M_contig118531.3829.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig118531.3829.1
Unique Nameprot_M-pyrifera_M_contig118531.3829.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length132
Homology
BLAST of mRNA_M-pyrifera_M_contig118531.3829.1 vs. uniprot
Match: A0A7Y5FAI2_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5FAI2_9BACT)

HSP 1 Score: 97.8 bits (242), Expect = 3.570e-21
Identity = 55/130 (42.31%), Postives = 77/130 (59.23%), Query Frame = 0
Query:    1 MSPLHVPLNRVRKRIWAQRGLTHLSQSLFVTASLACFWLLLCRLFPLLRYEVEGAATILTLGILTAGWLTYRQRPDIKTAALAADERLGLRERLTSSLELAGLESRMVTAVHRDALHHVGRLNVGRDFPL 130
            M PL   L R+R R++  +    +  SL  + +LAC WLL+ RLFP +      +  ++ LG+L A   +  +RP +  AAL AD+RLGL ER+TSSL+L G+E  MV AVH DA   + RLN   +FP 
Sbjct:    1 MDPLMAALRRLRLRLFITQWTRAVVISLIASTALACGWLLVARLFPTVGPVEPVSLVLVVLGLLAATTFSVWKRPSVLKAALEADKRLGLHERITSSLQLEGVEGAMVDAVHADARAQLARLNYTGEFPF 130          
BLAST of mRNA_M-pyrifera_M_contig118531.3829.1 vs. uniprot
Match: A0A1M5XAN0_9CLOT (Uncharacterized protein n=1 Tax=Clostridium grantii DSM 8605 TaxID=1121316 RepID=A0A1M5XAN0_9CLOT)

HSP 1 Score: 60.8 bits (146), Expect = 3.370e-8
Identity = 40/126 (31.75%), Postives = 69/126 (54.76%), Query Frame = 0
Query:    8 LNRVRKRIWAQRGLTHLSQSLFVTASLACFWLLLCRLFPLLR-YEVEGAATILTLGILTAGWLTYRQRPDIKTAALAADERLGLRERLTSSLELAGLESRMVTAVHRDALHHVGRLNVGRDFPLQP 132
            LNR+++R++  + + +L   + +  S+    ++L R  P+ + Y + G    +   +++  W   +   DI T AL AD  LGL+ER+T+SLEL G E  M     +DAL H+ +L+  R+  L P
Sbjct:   12 LNRIKRRLFVAQLINYLIICIIIGVSIGVGIVILSRFIPIYKPYRLSGILVGIA-ALISVIWCFIKMPKDI-TTALKADS-LGLKERITTSLELKGNEEIMAQLQKKDALKHIRKLDYKRELTLVP 134          
BLAST of mRNA_M-pyrifera_M_contig118531.3829.1 vs. uniprot
Match: A0A3A0CCK5_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3A0CCK5_9BACT)

HSP 1 Score: 58.2 bits (139), Expect = 3.010e-7
Identity = 46/138 (33.33%), Postives = 66/138 (47.83%), Query Frame = 0
Query:    1 MSPLHVPLNRVRKRIWAQRGLTHLSQSLFVTASLACFW---LLLCRL----FPLLRYEVEGAATILTLGILTAGWLTYRQRPDIKTAALAADERLGLRERLTSSLELAGLESRMVTAVHRDALHHVGRLNVGRDFPLQ 131
            MS L   + + R+R+W  R L      LF +    C W   LL+ RL    FPL    + GA   L + ++   WL   Q P++  AA+  D   GLRER+++ LE+   +     AVH DA   V  L+  R  P+Q
Sbjct:    1 MSILEKQVRQARRRLWLNRWLRIWGWCLFGSG---CIWTALLLVDRLLGIDFPLEWLALGGACISLVVSVV---WLACTQDPEL-AAAIELDRAAGLRERVSTCLEVPSADDPFAAAVHADAERSVAGLSARRLIPVQ 131          
BLAST of mRNA_M-pyrifera_M_contig118531.3829.1 vs. uniprot
Match: A0A5C5YU04_9BACT (Chromosome partition protein Smc n=1 Tax=Posidoniimonas polymericola TaxID=2528002 RepID=A0A5C5YU04_9BACT)

HSP 1 Score: 56.6 bits (135), Expect = 1.020e-6
Identity = 42/130 (32.31%), Postives = 62/130 (47.69%), Query Frame = 0
Query:   11 VRKRIWAQRG------LTHLSQSLFVTASLACFWLLLCRLFPLLRYEVEGAATILTLGILTAGWLTYRQRPDIKTAALAADERLGLRERLTSSLEL--AGLESRMVTAVHRDALHHVGRLNVGRDFPLQP 132
            VR+ +W   G      +   +  + V  +L   W          +Y + G A      ++TAG  T  QR     AA+  D R GLRER++SSL L  + LES    A+  DA+H VGR+ +G  F ++P
Sbjct:   21 VRRLVWCLTGALAVAAIAIAAPKVLVVENLPAMWA---------QYWLIGGAAA---ALITAGVWTAVQRRSSLEAAIEIDRRYGLRERVSSSLSLPESALESEAGQALMNDAVHSVGRIEIGEKFHVRP 138          
BLAST of mRNA_M-pyrifera_M_contig118531.3829.1 vs. uniprot
Match: A0A3M1EU18_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1EU18_9CHLR)

HSP 1 Score: 50.8 bits (120), Expect = 7.240e-5
Identity = 42/131 (32.06%), Postives = 63/131 (48.09%), Query Frame = 0
Query:    2 SPLHVPLNRVRKRIWAQRGLTHLSQSLFVTASLACFWLLLCRLFPLLRYEVEGAATILTLGILTAGWLTYRQRPDIKTAALAADERLGLRERLTSSLELA--GLESRMVTAVHRDALHHVGRLNVGRDFPL 130
            + L  PL  + +R+  + GL   S++L++  +     L+  RL P+ R E      +L   I   G+   R  P +   A  AD  LGL+ERL+++LELA  G    +V     DAL    R+N  RD  L
Sbjct:   24 AELGPPLRAIGRRLRLRDGLLFASRTLWLGLAGTALVLVAGRLRPIERLEGWAGVPLLIWLITVLGYTLMRPLP-LAAVARRADITLGLKERLSTALELAARGTRGELVERQWNDALSMAQRINPRRDIGL 153          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118531.3829.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A7Y5FAI2_9BACT3.570e-2142.31Uncharacterized protein n=1 Tax=Candidatus Hydroge... [more]
A0A1M5XAN0_9CLOT3.370e-831.75Uncharacterized protein n=1 Tax=Clostridium granti... [more]
A0A3A0CCK5_9BACT3.010e-733.33Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
A0A5C5YU04_9BACT1.020e-632.31Chromosome partition protein Smc n=1 Tax=Posidonii... [more]
A0A3M1EU18_9CHLR7.240e-532.06Uncharacterized protein (Fragment) n=1 Tax=Chlorof... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..71
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 72..132
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..40
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..51
NoneNo IPR availableTMHMMTMhelixcoord: 20..42
NoneNo IPR availableTMHMMTMhelixcoord: 52..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig118531contigM-pyrifera_M_contig118531:153..548 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig118531.3829.1mRNA_M-pyrifera_M_contig118531.3829.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig118531 144..548 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig118531.3829.1 ID=prot_M-pyrifera_M_contig118531.3829.1|Name=mRNA_M-pyrifera_M_contig118531.3829.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=132bp
MSPLHVPLNRVRKRIWAQRGLTHLSQSLFVTASLACFWLLLCRLFPLLRY
EVEGAATILTLGILTAGWLTYRQRPDIKTAALAADERLGLRERLTSSLEL
AGLESRMVTAVHRDALHHVGRLNVGRDFPLQP
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