prot_M-pyrifera_M_contig118519.3827.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig118519.3827.1
Unique Nameprot_M-pyrifera_M_contig118519.3827.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length97
Homology
BLAST of mRNA_M-pyrifera_M_contig118519.3827.1 vs. uniprot
Match: A0A8J4UG06_CLAMG (Rhomboid-related protein 4 isoform X1 (Fragment) n=1 Tax=Clarias magur TaxID=1594786 RepID=A0A8J4UG06_CLAMG)

HSP 1 Score: 64.3 bits (155), Expect = 4.350e-10
Identity = 39/83 (46.99%), Postives = 47/83 (56.63%), Query Frame = 0
Query:   15 QILGDATAMFTALSGFSGVLFGYKVLLTQGAPPEHMSALMGILPLQTRYLVWGELVLIHVMFPSSSFTAHLCGIVAALTISMG 97
            QI GD +       GFSGVLFG KVL      P  +  +MGI P+  RY  W ELVLIH+M P +SF  HL GI+  L  + G
Sbjct:  128 QITGDYSFSMQCAVGFSGVLFGLKVL-NNYYNPGTVKYIMGI-PVANRYACWIELVLIHIMNPGTSFVGHLSGILVGLLYTTG 208          
BLAST of mRNA_M-pyrifera_M_contig118519.3827.1 vs. uniprot
Match: UPI001CC54DDE (rhomboid-related protein 4 n=1 Tax=Dromiciops gliroides TaxID=33562 RepID=UPI001CC54DDE)

HSP 1 Score: 63.5 bits (153), Expect = 9.220e-10
Identity = 35/97 (36.08%), Postives = 51/97 (52.58%), Query Frame = 0
Query:    1 LSQFLYISCAYFRQQILGDATAMFTALSGFSGVLFGYKVLLTQGAPPEHMSALMGILPLQTRYLVWGELVLIHVMFPSSSFTAHLCGIVAALTISMG 97
            L+  +Y+   Y   ++LG          GFSGVLFG KVL     P  H + +   +P   +Y  W ELV+IH++ P +SF  HL GI+  L  ++G
Sbjct:  114 LTGVVYMVLEYTVAELLGQPAYKIYCAIGFSGVLFGLKVLSNNYNPGGHTNVMGMYIP--NKYACWVELVMIHLLSPQTSFAGHLAGIIVGLMYTLG 208          
BLAST of mRNA_M-pyrifera_M_contig118519.3827.1 vs. uniprot
Match: A0A673BX71_9TELE (Rhomboid domain containing 1 n=1 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673BX71_9TELE)

HSP 1 Score: 62.8 bits (151), Expect = 9.560e-10
Identity = 37/83 (44.58%), Postives = 49/83 (59.04%), Query Frame = 0
Query:   15 QILGDATAMFTALSGFSGVLFGYKVLLTQGAPPEHMSALMGILPLQTRYLVWGELVLIHVMFPSSSFTAHLCGIVAALTISMG 97
            +++ D +   T   GFSGVLFG KVL +    P  ++ +MGI P+  RY  W ELVLIHV  P +SF  HL GI+  L  + G
Sbjct:   44 ELMQDQSYSMTCAVGFSGVLFGLKVL-SNHYYPGGVTYMMGI-PVSNRYASWVELVLIHVTSPGTSFIGHLAGILVGLLYTSG 124          
BLAST of mRNA_M-pyrifera_M_contig118519.3827.1 vs. uniprot
Match: A0A1B6DBH9_9HEMI (Rhomboid domain-containing protein (Fragment) n=1 Tax=Clastoptera arizonana TaxID=38151 RepID=A0A1B6DBH9_9HEMI)

HSP 1 Score: 63.2 bits (152), Expect = 1.340e-9
Identity = 35/88 (39.77%), Postives = 52/88 (59.09%), Query Frame = 0
Query:    5 LYISCAYFRQQILGDATAMFTALSGFSGVLFGYKVLLTQGAPPEHMSALMGILPLQTRYLVWGELVLIHVMFPSSSFTAHLCGIVAAL 92
            LY+  A      + D++ M T   GFSGV+F  KV+ T+  PP   S  +  L + ++Y VW EL+LIH++ P+SSF  H  G++A L
Sbjct:  175 LYVGIAALGANYI-DSSMMKTCAIGFSGVIFALKVITTREEPPG--STFVSGLSVSSKYAVWLELILIHLLVPNSSFMGHFAGLLAGL 259          
BLAST of mRNA_M-pyrifera_M_contig118519.3827.1 vs. uniprot
Match: A0A673BUC4_9TELE (Rhomboid domain containing 1 n=6 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673BUC4_9TELE)

HSP 1 Score: 62.8 bits (151), Expect = 1.740e-9
Identity = 37/83 (44.58%), Postives = 49/83 (59.04%), Query Frame = 0
Query:   15 QILGDATAMFTALSGFSGVLFGYKVLLTQGAPPEHMSALMGILPLQTRYLVWGELVLIHVMFPSSSFTAHLCGIVAALTISMG 97
            +++ D +   T   GFSGVLFG KVL +    P  ++ +MGI P+  RY  W ELVLIHV  P +SF  HL GI+  L  + G
Sbjct:  128 ELMQDQSYSMTCAVGFSGVLFGLKVL-SNHYYPGGVTYMMGI-PVSNRYASWVELVLIHVTSPGTSFIGHLAGILVGLLYTSG 208          
BLAST of mRNA_M-pyrifera_M_contig118519.3827.1 vs. uniprot
Match: A0A673C0K7_9TELE (Rhomboid domain containing 1 n=2 Tax=Sphaeramia orbicularis TaxID=375764 RepID=A0A673C0K7_9TELE)

HSP 1 Score: 62.8 bits (151), Expect = 1.750e-9
Identity = 37/83 (44.58%), Postives = 49/83 (59.04%), Query Frame = 0
Query:   15 QILGDATAMFTALSGFSGVLFGYKVLLTQGAPPEHMSALMGILPLQTRYLVWGELVLIHVMFPSSSFTAHLCGIVAALTISMG 97
            +++ D +   T   GFSGVLFG KVL +    P  ++ +MGI P+  RY  W ELVLIHV  P +SF  HL GI+  L  + G
Sbjct:  128 ELMQDQSYSMTCAVGFSGVLFGLKVL-SNHYYPGGVTYMMGI-PVSNRYASWVELVLIHVTSPGTSFIGHLAGILVGLLYTSG 208          
BLAST of mRNA_M-pyrifera_M_contig118519.3827.1 vs. uniprot
Match: A0A2P6TCP9_CHLSO (Rhomboid mitochondrial n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TCP9_CHLSO)

HSP 1 Score: 62.4 bits (150), Expect = 2.520e-9
Identity = 39/94 (41.49%), Postives = 53/94 (56.38%), Query Frame = 0
Query:    2 SQFLYISCAYFRQQILGDATAMFTALS---GFSGVLFGYKVLLTQGAPPEHMSALMGILPLQTRYLVWGELVLIHVMFPSSSFTAHLCGIVAAL 92
            SQ LYI  A   +Q L  A       S   GFSGVLFG KV+L   +     S + G+  + T++  WGELV+  ++ P++SF  HLCGI+A L
Sbjct:  152 SQLLYIGLAVLLRQQLAPAAGWALLRSCAVGFSGVLFGLKVVLNHNS--AGWSEIYGV-TIPTKFAAWGELVVAQLLIPNASFFGHLCGILAGL 242          
BLAST of mRNA_M-pyrifera_M_contig118519.3827.1 vs. uniprot
Match: A0A6P3W9Z0_CLUHA (rhomboid-related protein 4 n=1 Tax=Clupea harengus TaxID=7950 RepID=A0A6P3W9Z0_CLUHA)

HSP 1 Score: 62.0 bits (149), Expect = 3.680e-9
Identity = 34/69 (49.28%), Postives = 44/69 (63.77%), Query Frame = 0
Query:   29 GFSGVLFGYKVLLTQGAPPEHMSALMGILPLQTRYLVWGELVLIHVMFPSSSFTAHLCGIVAALTISMG 97
            GFSGVLFG KV+      P  ++ +MG+ P+  RY  W ELVLIH+M P +SF  HL GI+  L  +MG
Sbjct:  143 GFSGVLFGLKVV-NNHYNPGGITQVMGV-PVANRYSCWVELVLIHIMSPGTSFVGHLAGILVGLLYTMG 209          
BLAST of mRNA_M-pyrifera_M_contig118519.3827.1 vs. uniprot
Match: A0A3B3ZK60_9GOBI (Rhomboid domain containing 1 n=2 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B3ZK60_9GOBI)

HSP 1 Score: 61.6 bits (148), Expect = 4.430e-9
Identity = 35/69 (50.72%), Postives = 43/69 (62.32%), Query Frame = 0
Query:   29 GFSGVLFGYKVLLTQGAPPEHMSALMGILPLQTRYLVWGELVLIHVMFPSSSFTAHLCGIVAALTISMG 97
            GFSGVLFG KVL+    P   +S +MGI P+  RY  W ELVLIH+  P +SF  HL GI+  L  + G
Sbjct:  142 GFSGVLFGLKVLVNHYFPGG-VSYVMGI-PISNRYASWAELVLIHITSPGTSFIGHLSGILVGLLYTCG 208          
BLAST of mRNA_M-pyrifera_M_contig118519.3827.1 vs. uniprot
Match: UPI001EEA09C3 (LOW QUALITY PROTEIN: rhomboid-related protein 4 n=1 Tax=Silurus meridionalis TaxID=175797 RepID=UPI001EEA09C3)

HSP 1 Score: 61.6 bits (148), Expect = 4.740e-9
Identity = 39/97 (40.21%), Postives = 52/97 (53.61%), Query Frame = 0
Query:    1 LSQFLYISCAYFRQQILGDATAMFTALSGFSGVLFGYKVLLTQGAPPEHMSALMGILPLQTRYLVWGELVLIHVMFPSSSFTAHLCGIVAALTISMG 97
            L+  +Y+       ++L D +       GFSGVLFG KV+      P   + +MG LP+  RY  W ELVLIH+M P +SF  HL GIV  L  + G
Sbjct:  114 LTGLVYLLLEAALTELLDDFSFSMQCAVGFSGVLFGLKVV-NNYYNPGGSTYIMG-LPVAKRYACWVELVLIHIMNPGTSFVGHLAGIVVGLLYTXG 208          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118519.3827.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J4UG06_CLAMG4.350e-1046.99Rhomboid-related protein 4 isoform X1 (Fragment) n... [more]
UPI001CC54DDE9.220e-1036.08rhomboid-related protein 4 n=1 Tax=Dromiciops glir... [more]
A0A673BX71_9TELE9.560e-1044.58Rhomboid domain containing 1 n=1 Tax=Sphaeramia or... [more]
A0A1B6DBH9_9HEMI1.340e-939.77Rhomboid domain-containing protein (Fragment) n=1 ... [more]
A0A673BUC4_9TELE1.740e-944.58Rhomboid domain containing 1 n=6 Tax=Sphaeramia or... [more]
A0A673C0K7_9TELE1.750e-944.58Rhomboid domain containing 1 n=2 Tax=Sphaeramia or... [more]
A0A2P6TCP9_CHLSO2.520e-941.49Rhomboid mitochondrial n=1 Tax=Chlorella sorokinia... [more]
A0A6P3W9Z0_CLUHA3.680e-949.28rhomboid-related protein 4 n=1 Tax=Clupea harengus... [more]
A0A3B3ZK60_9GOBI4.430e-950.72Rhomboid domain containing 1 n=2 Tax=Periophthalmu... [more]
UPI001EEA09C34.740e-940.21LOW QUALITY PROTEIN: rhomboid-related protein 4 n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR43066RHOMBOID-RELATED PROTEINcoord: 28..94
NoneNo IPR availablePANTHERPTHR43066:SF1RHOMBOID-RELATED PROTEIN 4coord: 28..94
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..40
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 95..97
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..69
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 70..94
NoneNo IPR availableSUPERFAMILY144091Rhomboid-likecoord: 22..93
NoneNo IPR availableTMHMMTMhelixcoord: 20..42
NoneNo IPR availableTMHMMTMhelixcoord: 63..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig118519contigM-pyrifera_M_contig118519:226..516 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig118519.3827.1mRNA_M-pyrifera_M_contig118519.3827.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig118519 226..516 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig118519.3827.1 ID=prot_M-pyrifera_M_contig118519.3827.1|Name=mRNA_M-pyrifera_M_contig118519.3827.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=97bp
LSQFLYISCAYFRQQILGDATAMFTALSGFSGVLFGYKVLLTQGAPPEHM
SALMGILPLQTRYLVWGELVLIHVMFPSSSFTAHLCGIVAALTISMG
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