prot_M-pyrifera_M_contig118320.3788.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig118320.3788.1
Unique Nameprot_M-pyrifera_M_contig118320.3788.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length138
Homology
BLAST of mRNA_M-pyrifera_M_contig118320.3788.1 vs. uniprot
Match: A0A7S4ILN7_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4ILN7_9EUKA)

HSP 1 Score: 183 bits (464), Expect = 5.070e-56
Identity = 93/131 (70.99%), Postives = 110/131 (83.97%), Query Frame = 0
Query:    9 VRRETFNHLSAWLEDARQHSNSNMTIMLIGNKNDLEHRRQVSFEEGERFAKENGLVFLETSAKTAANVEEAFINTAKEIYRKIQDGVFDVNNETYGIKIGSQAGSRPGEQTRPGGQPGRRPE--PDNGGCC 137
             RRETF+HLS+WLEDAR+HSN +MTIMLIGNK+DL+ +RQVS++EGE FAKENGLVFLETSAKTA NV+EAF+ TA EIYRKI+DGVFDV+NETYGIK+G+QAG+     T    QPGRRP   P + GCC
Sbjct:   92 TRRETFSHLSSWLEDARKHSNKDMTIMLIGNKSDLDQKRQVSYQEGEAFAKENGLVFLETSAKTAENVQEAFVGTASEIYRKIKDGVFDVSNETYGIKVGAQAGTGGSNSTTV--QPGRRPNQPPPDDGCC 220          
BLAST of mRNA_M-pyrifera_M_contig118320.3788.1 vs. uniprot
Match: A0A061RFG3_9CHLO (Ras-related protein Rab-2A n=6 Tax=core chlorophytes TaxID=2692248 RepID=A0A061RFG3_9CHLO)

HSP 1 Score: 175 bits (443), Expect = 6.650e-53
Identity = 91/130 (70.00%), Postives = 105/130 (80.77%), Query Frame = 0
Query:    9 VRRETFNHLSAWLEDARQHSNSNMTIMLIGNKNDLEHRRQVSFEEGERFAKENGLVFLETSAKTAANVEEAFINTAKEIYRKIQDGVFDVNNETYGIKIGSQAGSRPGEQTRPG-GQPGRRPEPDNGGCC 137
             RR+TFNHL+ WLEDARQH+N NMTIMLIGNK+DL HRR VS EEGE FAKE+GLVFLETSAKTA NVEEAFINTA++IY KI+ GVFDV+NE+YGIK+G  AG    +  +PG GQ G+R     GGCC
Sbjct:   89 TRRDTFNHLANWLEDARQHANPNMTIMLIGNKSDLNHRRAVSTEEGEAFAKEHGLVFLETSAKTAHNVEEAFINTARKIYEKIEQGVFDVSNESYGIKVGYGAGGSGPQTVKPGEGQSGQR---SGGGCC 215          
BLAST of mRNA_M-pyrifera_M_contig118320.3788.1 vs. uniprot
Match: A0A6P3XRN6_DINQU (ras-related protein Rab-2 n=5 Tax=Aculeata TaxID=7434 RepID=A0A6P3XRN6_DINQU)

HSP 1 Score: 174 bits (442), Expect = 9.150e-53
Identity = 92/131 (70.23%), Postives = 103/131 (78.63%), Query Frame = 0
Query:    9 VRRETFNHLSAWLEDARQHSNSNMTIMLIGNKNDLEHRRQVSFEEGERFAKENGLVFLETSAKTAANVEEAFINTAKEIYRKIQDGVFDVNNETYGIKIGSQAGSRPGEQTRPGGQPGR--RPEPDNGGCC 137
             RRETFNHL+ WLEDARQHSNSNM IMLIGNK+DL++RR+V  EEGE FA+E+GLVF+ETSAKTAANVEEAFINTAKEIY KIQ+GVFD+NNE  GIKIG Q        T PGG PG   +     GGCC
Sbjct:   89 TRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDNRREVRREEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQH-----SPTSPGGLPGTGGQGSAQGGGCC 214          
BLAST of mRNA_M-pyrifera_M_contig118320.3788.1 vs. uniprot
Match: A0A250XE48_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XE48_9CHLO)

HSP 1 Score: 174 bits (441), Expect = 1.220e-52
Identity = 88/129 (68.22%), Postives = 106/129 (82.17%), Query Frame = 0
Query:    9 VRRETFNHLSAWLEDARQHSNSNMTIMLIGNKNDLEHRRQVSFEEGERFAKENGLVFLETSAKTAANVEEAFINTAKEIYRKIQDGVFDVNNETYGIKIGSQAGSRPGEQTRPGGQPGRRPEPDNGGCC 137
             RRETFNHL++WLEDARQH+N NMTIMLIGNK+DL HRR V+ EEGE+FAKE+GL+FLETSA+TA NVE+AFINTA+EIYRKIQDGVFDV+NE+YGIK+G  AG+      + G +P +      GGCC
Sbjct:   89 TRRETFNHLASWLEDARQHANPNMTIMLIGNKSDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEDAFINTAREIYRKIQDGVFDVSNESYGIKVGYGAGASGQPVAKVGEEPKK-----TGGCC 212          
BLAST of mRNA_M-pyrifera_M_contig118320.3788.1 vs. uniprot
Match: A0A7S3FHX7_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3FHX7_9VIRI)

HSP 1 Score: 174 bits (440), Expect = 1.840e-52
Identity = 86/114 (75.44%), Postives = 98/114 (85.96%), Query Frame = 0
Query:    9 VRRETFNHLSAWLEDARQHSNSNMTIMLIGNKNDLEHRRQVSFEEGERFAKENGLVFLETSAKTAANVEEAFINTAKEIYRKIQDGVFDVNNETYGIKIGSQAGSRPGEQTRPG 122
             RRETFNHL++WLEDARQH+NSNMTIMLIGNK DL HRRQVS EEGE+FAKENGL+F+ETSAKTAANVEEAF+ TA +IY KIQ+GVFDV+NE+YGIK+G  AG   G    PG
Sbjct:   89 TRRETFNHLASWLEDARQHANSNMTIMLIGNKADLNHRRQVSTEEGEQFAKENGLIFMETSAKTAANVEEAFVGTATKIYEKIQEGVFDVSNESYGIKVGYGAGGAGGGTINPG 202          
BLAST of mRNA_M-pyrifera_M_contig118320.3788.1 vs. uniprot
Match: A0A150GWP3_GONPE (RABB1 protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GWP3_GONPE)

HSP 1 Score: 172 bits (435), Expect = 2.470e-52
Identity = 83/114 (72.81%), Postives = 101/114 (88.60%), Query Frame = 0
Query:    9 VRRETFNHLSAWLEDARQHSNSNMTIMLIGNKNDLEHRRQVSFEEGERFAKENGLVFLETSAKTAANVEEAFINTAKEIYRKIQDGVFDVNNETYGIKIGSQAGSRPGEQTRPG 122
             RRETFNHL++WLEDARQH+N NMTIMLIGNK+DL HRR V+ EEGE+FA+E+GL+FLETSA+TA NVEEAFINTAKEIY+KIQDG+FDV+NE+YGIK+G  AG+   +  +PG
Sbjct:   43 TRRETFNHLASWLEDARQHANPNMTIMLIGNKSDLTHRRAVTTEEGEQFAREHGLIFLETSARTAYNVEEAFINTAKEIYKKIQDGIFDVSNESYGIKVGYGAGNAGPQTVKPG 156          
BLAST of mRNA_M-pyrifera_M_contig118320.3788.1 vs. uniprot
Match: A0A8C4ZFF0_GADMO (RAB2A, member RAS oncogene family n=2 Tax=Bilateria TaxID=33213 RepID=A0A8C4ZFF0_GADMO)

HSP 1 Score: 173 bits (439), Expect = 3.130e-52
Identity = 90/127 (70.87%), Postives = 104/127 (81.89%), Query Frame = 0
Query:    9 VRRETFNHLSAWLEDARQHSNSNMTIMLIGNKNDLEHRRQVSFEEGERFAKENGLVFLETSAKTAANVEEAFINTAKEIYRKIQDGVFDVNNETYGIKIGSQ--------AGSRPGEQTRPGGQPGR 127
             RR+TFNHL+ WLEDARQHSNSNM IMLIGNK+DLE RR+V  EEGE FA+E+GL+F+ETSAKTA+NVEEAFINTAKEIY KIQ+GVFD+NNE  GIKIG Q        AGS+ G+Q+R GG  GR
Sbjct:   79 TRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHPTTSSTLAGSQGGQQSRGGGAAGR 205          
BLAST of mRNA_M-pyrifera_M_contig118320.3788.1 vs. uniprot
Match: B3S6V0_TRIAD (Uncharacterized protein n=51 Tax=Eumetazoa TaxID=6072 RepID=B3S6V0_TRIAD)

HSP 1 Score: 173 bits (438), Expect = 3.280e-52
Identity = 90/129 (69.77%), Postives = 101/129 (78.29%), Query Frame = 0
Query:    9 VRRETFNHLSAWLEDARQHSNSNMTIMLIGNKNDLEHRRQVSFEEGERFAKENGLVFLETSAKTAANVEEAFINTAKEIYRKIQDGVFDVNNETYGIKIGSQAGSRPGEQTRPGGQPGRRPEPDNGGCC 137
             RRETFNHL+ WLEDARQHSNSNM IMLIGNK+DLE RR V  EEGE FA+E+GL+F+ETSAKTAANVEEAFINTAKEIY+KIQDG FD+NNE  GIK+G Q  S P         P R P+  +GGCC
Sbjct:   89 TRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRRDVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQDGAFDINNEANGIKLGPQNPSNPSTSV-----PDRPPQ--SGGCC 210          
BLAST of mRNA_M-pyrifera_M_contig118320.3788.1 vs. uniprot
Match: A0A836EMU4_9HYME (RAB2 protein (Fragment) n=1 Tax=Acromyrmex insinuator TaxID=230686 RepID=A0A836EMU4_9HYME)

HSP 1 Score: 171 bits (433), Expect = 3.300e-52
Identity = 91/130 (70.00%), Postives = 103/130 (79.23%), Query Frame = 0
Query:    9 VRRETFNHLSAWLEDARQHSNSNMTIMLIGNKNDLEHRRQVSFEEGERFAKENGLVFLETSAKTAANVEEAFINTAKEIYRKIQDGVFDVNNETYGIKIGSQ-AGSRPGEQTRPGGQPGRRPEPDNGGCC 137
             RRETFNHL+ WLEDARQHSNSNM IMLIGNK+DL+ RR+V  EEGE FA+E+GLVF+ETSAKTAANVEEAFINTAKEIY KIQ+GVFD+NNE  GIKIG Q + + PG     GGQ   +     GGCC
Sbjct:   29 TRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLDSRREVRREEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHSPTSPGGLAGTGGQGSAQ----GGGCC 154          
BLAST of mRNA_M-pyrifera_M_contig118320.3788.1 vs. uniprot
Match: YPTV4_VOLCA (GTP-binding protein yptV4 n=14 Tax=CS clade TaxID=2812636 RepID=YPTV4_VOLCA)

HSP 1 Score: 173 bits (438), Expect = 3.590e-52
Identity = 88/129 (68.22%), Postives = 105/129 (81.40%), Query Frame = 0
Query:    9 VRRETFNHLSAWLEDARQHSNSNMTIMLIGNKNDLEHRRQVSFEEGERFAKENGLVFLETSAKTAANVEEAFINTAKEIYRKIQDGVFDVNNETYGIKIGSQAGSRPGEQTRPGGQPGRRPEPDNGGCC 137
             RRETFNHL++WLEDARQH+N NMTIMLIGNK DL HRR V+ EEGE+FAKE+GL+FLETSA+TA NVEEAFINTAKEIY+KIQDGVFDV+NE+YGIK+G  AG+   +  +PG    R+    +  CC
Sbjct:   89 TRRETFNHLASWLEDARQHANPNMTIMLIGNKCDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSNESYGIKVGYGAGNAGPQAAKPGEGDARK----SSSCC 213          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig118320.3788.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4ILN7_9EUKA5.070e-5670.99Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A061RFG3_9CHLO6.650e-5370.00Ras-related protein Rab-2A n=6 Tax=core chlorophyt... [more]
A0A6P3XRN6_DINQU9.150e-5370.23ras-related protein Rab-2 n=5 Tax=Aculeata TaxID=7... [more]
A0A250XE48_9CHLO1.220e-5268.22Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A7S3FHX7_9VIRI1.840e-5275.44Hypothetical protein n=1 Tax=Prasinoderma singular... [more]
A0A150GWP3_GONPE2.470e-5272.81RABB1 protein n=1 Tax=Gonium pectorale TaxID=33097... [more]
A0A8C4ZFF0_GADMO3.130e-5270.87RAB2A, member RAS oncogene family n=2 Tax=Bilateri... [more]
B3S6V0_TRIAD3.280e-5269.77Uncharacterized protein n=51 Tax=Eumetazoa TaxID=6... [more]
A0A836EMU4_9HYME3.300e-5270.00RAB2 protein (Fragment) n=1 Tax=Acromyrmex insinua... [more]
YPTV4_VOLCA3.590e-5268.22GTP-binding protein yptV4 n=14 Tax=CS clade TaxID=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 65..87
score: 47.48
coord: 30..43
score: 47.94
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 1..90
e-value: 1.4E-11
score: 35.0
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 1..90
e-value: 1.7E-4
score: -42.6
NoneNo IPR availableGENE3D3.40.50.300coord: 7..111
e-value: 1.5E-25
score: 91.7
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 9..122
NoneNo IPR availablePANTHERPTHR24073:SF869RAS-RELATED PROTEIN RAB-2Bcoord: 9..122
NoneNo IPR availablePROSITEPS51419RABcoord: 1..137
score: 14.847
IPR001806Small GTPasePFAMPF00071Rascoord: 10..88
e-value: 1.8E-22
score: 79.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 10..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig118320contigM-pyrifera_M_contig118320:54..467 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig118320.3788.1mRNA_M-pyrifera_M_contig118320.3788.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig118320 54..467 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig118320.3788.1 ID=prot_M-pyrifera_M_contig118320.3788.1|Name=mRNA_M-pyrifera_M_contig118320.3788.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=138bp
MVARRLTRVRRETFNHLSAWLEDARQHSNSNMTIMLIGNKNDLEHRRQVS
FEEGERFAKENGLVFLETSAKTAANVEEAFINTAKEIYRKIQDGVFDVNN
ETYGIKIGSQAGSRPGEQTRPGGQPGRRPEPDNGGCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase