prot_M-pyrifera_M_contig117843.3693.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig117843.3693.1
Unique Nameprot_M-pyrifera_M_contig117843.3693.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length130
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117843.3693.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013762Integrase-like, catalytic domain superfamilyGENE3D1.10.443.10coord: 1..123
e-value: 4.5E-19
score: 71.0
IPR002104Integrase, catalytic domainPFAMPF00589Phage_integrasecoord: 7..121
e-value: 8.7E-11
score: 41.9
IPR011010DNA breaking-rejoining enzyme, catalytic coreSUPERFAMILY56349DNA breaking-rejoining enzymescoord: 3..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig117843contigM-pyrifera_M_contig117843:71..460 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig117843.3693.1mRNA_M-pyrifera_M_contig117843.3693.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig117843 71..460 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig117843.3693.1 ID=prot_M-pyrifera_M_contig117843.3693.1|Name=mRNA_M-pyrifera_M_contig117843.3693.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=130bp
GPHLRLEETKGHPERRIVPIPALGGALDMVEALREWKELAIKVGPEDPVF
TDHRGRAITWGKFQRELRRTAKEVGHADWWKLTAHGLRAGMATDLAERGA
TMDEIMRAGRWNSATAASTYRAGKGRGSE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013762Integrase-like_cat_sf
IPR002104Integrase_catalytic
IPR011010DNA_brk_join_enz