prot_M-pyrifera_M_contig117816.3685.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig117816.3685.1
Unique Nameprot_M-pyrifera_M_contig117816.3685.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length169
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117816.3685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 92..132
e-value: 13.0
score: 12.5
coord: 11..48
e-value: 0.47
score: 19.5
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 1..169
e-value: 9.0E-19
score: 69.4
NoneNo IPR availablePANTHERPTHR23315BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAININGcoord: 59..154
NoneNo IPR availablePANTHERPTHR23315:SF64ARM REPEAT SUPERFAMILY PROTEINcoord: 59..154
NoneNo IPR availablePANTHERPTHR23315BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAININGcoord: 1..49
NoneNo IPR availablePANTHERPTHR23315:SF64ARM REPEAT SUPERFAMILY PROTEINcoord: 1..49
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 1..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig117816contigM-pyrifera_M_contig117816:2..508 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig117816.3685.1mRNA_M-pyrifera_M_contig117816.3685.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig117816 2..508 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig117816.3685.1 ID=prot_M-pyrifera_M_contig117816.3685.1|Name=mRNA_M-pyrifera_M_contig117816.3685.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=169bp
AAKLLHELIQDDDARRAAVDAGAVPVLVDLVDENRTQHAIVALCSLVAIP
SGVSAALDAKCIDTIVVSMSHVGATPQSNEFAARTLFRLFARREARELAR
AAGSIPVLVQLLNVPDAHCRVAAANCLSFHTSDETDRSIAISAGIVPPLT
AMLAPSCTNPERTAAARIV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold