prot_M-pyrifera_M_contig117778.3668.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig117778.3668.1
Unique Nameprot_M-pyrifera_M_contig117778.3668.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length107
Homology
BLAST of mRNA_M-pyrifera_M_contig117778.3668.1 vs. uniprot
Match: A0A1Q4DQZ7_9HYPH (CHRD domain-containing protein n=1 Tax=Rhizobiales bacterium 64-17 TaxID=1895814 RepID=A0A1Q4DQZ7_9HYPH)

HSP 1 Score: 52.8 bits (125), Expect = 2.160e-6
Identity = 39/112 (34.82%), Postives = 49/112 (43.75%), Query Frame = 0
Query:    1 GGGIVFAALDTETGEFSWEFTYAGLSGAPGAAHFHEAPAGVAGGVTVPXXXXXXXSGAGSGSVMLAGGGLADAISALTGDGGFGPGAITD-----WYLNIHTPANGAGELRG 107
            G G V A  DT + + SW+ +Y  LSG   AAHFH   AG  G V VP                     ++ A S L G         +D      Y+N+HT AN AGE+RG
Sbjct:   44 GSGAVTATYDTASKKLSWKGSYKDLSGPATAAHFHIGEAGKNGAVAVP---------------------ISPATSPLEGSATLTDAQASDLLAGRMYVNVHTAANKAGEIRG 134          
BLAST of mRNA_M-pyrifera_M_contig117778.3668.1 vs. uniprot
Match: A0A4R3KW73_9SPHI (CHRD domain-containing protein n=1 Tax=Anseongella ginsenosidimutans TaxID=496056 RepID=A0A4R3KW73_9SPHI)

HSP 1 Score: 53.1 bits (126), Expect = 2.320e-6
Identity = 42/112 (37.50%), Postives = 55/112 (49.11%), Query Frame = 0
Query:    1 GGGIVFAALDTETGEFSWEFTYAGLSGAPGAAHFHE-----APAGVAGGVTVPXXXXXXXSGAGSGSVMLAGGGLADAISALTGDGGFGPGAITDWYLNIHTPANGAGELRG 107
            G G     LDT TGEF+++  ++GL+G P   HFH      A AGV  G+T         +G+ S +V +     AD    L G           WY+NIHT A GAGE+RG
Sbjct:   56 GAGSFEGTLDTATGEFTFKLEWSGLTGPPSMMHFHGPADPGADAGVKIGIT---DFPAEAAGSVSQTVTVE---EADRADLLAGK----------WYVNIHTDAYGAGEIRG 151          
BLAST of mRNA_M-pyrifera_M_contig117778.3668.1 vs. uniprot
Match: A0A6L9KYB4_9PROT (CHRD domain-containing protein n=1 Tax=Ferrovum sp. TaxID=2609467 RepID=A0A6L9KYB4_9PROT)

HSP 1 Score: 52.0 bits (123), Expect = 4.490e-6
Identity = 41/108 (37.96%), Postives = 49/108 (45.37%), Query Frame = 0
Query:    1 GGGIVFAALDTETGEFSWEFTYAGLSGAPGAAHFH-EAPAGVAGGVTVPXXXXXXXSGAGSGSVMLAGGGLADAISALTGDGGFGPGAITDWYLNIHTPANGAGELRG 107
            G GIV A LDT T   S+  TYAGLSG   AAHFH  A A    GV +           G  ++         A + + G           WY+NIHT  N AGE+RG
Sbjct:   45 GNGIVDATLDTATSRLSYTITYAGLSGPATAAHFHGPASATETAGVAIKINGPLASPIRGEATLTHE-----QAEALMKGQ----------WYVNIHTANNPAGEIRG 137          
BLAST of mRNA_M-pyrifera_M_contig117778.3668.1 vs. uniprot
Match: UPI001C0138CE (CHRD domain-containing protein n=3 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI001C0138CE)

HSP 1 Score: 51.6 bits (122), Expect = 6.290e-6
Identity = 40/108 (37.04%), Postives = 50/108 (46.30%), Query Frame = 0
Query:    1 GGGIVFAALDTETGEFSWEFTYAGLSGAPGAAHFH-EAPAGVAGGVTVPXXXXXXXSGAGSGSVMLAGGGLADAISALTGDGGFGPGAITDWYLNIHTPANGAGELRG 107
            G G      D  T + SW+ TY+GLSG   AAHFH  A AG  GGV +           GS ++  A      A   + G           +Y+NIHT AN AGE+RG
Sbjct:   45 GKGTADIDYDAATKKLSWKLTYSGLSGPATAAHFHGPAAAGANGGVALAIPNAAKSPVEGSATLTDA-----QAADLMAGK----------YYINIHTAANPAGEIRG 137          
BLAST of mRNA_M-pyrifera_M_contig117778.3668.1 vs. uniprot
Match: A0A345ZT04_9HYPH (CHRD domain-containing protein n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A345ZT04_9HYPH)

HSP 1 Score: 51.2 bits (121), Expect = 9.280e-6
Identity = 38/109 (34.86%), Postives = 54/109 (49.54%), Query Frame = 0
Query:    3 GIVFAALDTETGEFSWEFTYAGLSGAPGAAHFHEAPAGVAGGVTVPXXXXXXXSGAGS----GSVMLAGGGLADAISALTGDGGFGPGAITDWYLNIHTPANGAGELRG 107
            G + AA DT T + +W+ +Y+ L+G   AAHFH    G  GG+ VP       +GAGS    GS  L     +D ++                Y+N+HT A+ AGE+RG
Sbjct:   51 GSLTAAYDTATKKLTWKGSYSNLTGPAVAAHFHAGEPGKNGGIQVPI------TGAGSSPFEGSATLTDAQASDLLAGRL-------------YVNVHTAAHTAGEIRG 140          
BLAST of mRNA_M-pyrifera_M_contig117778.3668.1 vs. uniprot
Match: A0A7J4F6Y0_9ARCH (CHRD domain-containing protein n=1 Tax=Candidatus Micrarchaeota archaeon TaxID=2250274 RepID=A0A7J4F6Y0_9ARCH)

HSP 1 Score: 50.4 bits (119), Expect = 3.030e-5
Identity = 37/111 (33.33%), Postives = 46/111 (41.44%), Query Frame = 0
Query:    9 LDTETGEFSWEFTYAGLSGAPGAAHFHEAPAGVAGGVTVPXXXXXXXSGAGSGSVMLAGGGLADAISALTGDGGFGPGAIT------------DWYLNIHTPANGAGELRG 107
            L+ ETG F+W  ++ GL+G   AAHFH   AG       P        G                 S L+ D G   G  T            +WY+NIHT ANG GE+RG
Sbjct:   54 LNDETGMFAWIISFQGLTGPATAAHFH---AGAVDDTGPPVLNLDTDPGV--------------TFSGLSADAGIFAGTTTLSADAVMAVLSGNWYVNIHTEANGGGEIRG 147          
BLAST of mRNA_M-pyrifera_M_contig117778.3668.1 vs. uniprot
Match: UPI001BAA61ED (CHRD domain-containing protein n=1 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI001BAA61ED)

HSP 1 Score: 48.9 bits (115), Expect = 7.110e-5
Identity = 36/106 (33.96%), Postives = 47/106 (44.34%), Query Frame = 0
Query:    3 GIVFAALDTETGEFSWEFTYAGLSGAPGAAHFH-EAPAGVAGGVTVPXXXXXXXSGAGSGSVMLAGGGLADAISALTGDGGFGPGAITDWYLNIHTPANGAGELRG 107
            G+     DT +   SW+ +Y GLSG    AHFH  A  G   GV VP       S    G+  L     AD ++               +Y+N+HT AN AGE+RG
Sbjct:   52 GLADVTFDTASKALSWKLSYTGLSGPATMAHFHGPAEPGKNAGVAVPIPNTASGS---EGTATLTDAQAADLMAGK-------------YYVNVHTAANPAGEIRG 141          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117778.3668.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A1Q4DQZ7_9HYPH2.160e-634.82CHRD domain-containing protein n=1 Tax=Rhizobiales... [more]
A0A4R3KW73_9SPHI2.320e-637.50CHRD domain-containing protein n=1 Tax=Anseongella... [more]
A0A6L9KYB4_9PROT4.490e-637.96CHRD domain-containing protein n=1 Tax=Ferrovum sp... [more]
UPI001C0138CE6.290e-637.04CHRD domain-containing protein n=3 Tax=unclassifie... [more]
A0A345ZT04_9HYPH9.280e-634.86CHRD domain-containing protein n=1 Tax=Pseudolabry... [more]
A0A7J4F6Y0_9ARCH3.030e-533.33CHRD domain-containing protein n=1 Tax=Candidatus ... [more]
UPI001BAA61ED7.110e-533.96CHRD domain-containing protein n=1 Tax=unclassifie... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010895CHRDPFAMPF07452CHRDcoord: 2..107
e-value: 1.6E-15
score: 58.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig117778contigM-pyrifera_M_contig117778:231..551 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig117778.3668.1mRNA_M-pyrifera_M_contig117778.3668.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig117778 231..551 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig117778.3668.1 ID=prot_M-pyrifera_M_contig117778.3668.1|Name=mRNA_M-pyrifera_M_contig117778.3668.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=107bp
GGGIVFAALDTETGEFSWEFTYAGLSGAPGAAHFHEAPAGVAGGVTVPVT
VPATISGAGSGSVMLAGGGLADAISALTGDGGFGPGAITDWYLNIHTPAN
GAGELRG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010895CHRD