prot_M-pyrifera_M_contig117566.3634.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig117566.3634.1
Unique Nameprot_M-pyrifera_M_contig117566.3634.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length38
Homology
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BLAST of mRNA_M-pyrifera_M_contig117566.3634.1 vs. uniprot
Match: D7G657_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G657_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 2.380e-9
Identity = 30/35 (85.71%), Postives = 32/35 (91.43%), Query Frame = 0 
Query:    4 ALLAYEERELPGLKEEKPGLKLRQYKQMIFEQVRR 38
            AL AYEERELP LKEEKPGLKLRQYKQMIFEQ ++
Sbjct:  208 ALAAYEERELPALKEEKPGLKLRQYKQMIFEQFQK 242
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig117566.3634.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G657_ECTSI2.380e-985.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010422Coiled-coil domain-containing protein 124/Oxs1PFAMPF06244Ccdc124coord: 4..35
e-value: 5.2E-10
score: 40.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig117566contigM-pyrifera_M_contig117566:52..165 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig117566.3634.1mRNA_M-pyrifera_M_contig117566.3634.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig117566 52..165 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig117566.3634.1 ID=prot_M-pyrifera_M_contig117566.3634.1|Name=mRNA_M-pyrifera_M_contig117566.3634.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=38bp
FFQALLAYEERELPGLKEEKPGLKLRQYKQMIFEQVRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010422Ccdc124/Oxs1