prot_M-pyrifera_M_contig1170.3515.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig1170.3515.1
Unique Nameprot_M-pyrifera_M_contig1170.3515.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length167
Homology
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BLAST of mRNA_M-pyrifera_M_contig1170.3515.1 vs. uniprot
Match: D8LE74_ECTSI (Leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE74_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 5.200e-59
Identity = 108/154 (70.13%), Postives = 118/154 (76.62%), Query Frame = 0 
Query:   12 DGNNMPHLAIPPPFKNPNRKDVSTNWVKRWNRDKKKEMWTNGATGEASEGDPTSSSAERSSTASV-SANSTLVPGTAQYNRRRNALASRGIYEWEAALNTSAGKVYYVNNVNLGTAPAMPTCMDRLGDMTSLVTLKLSQNKLRSLPSRCDTSSI 164
            DGNNMPHLA+PP  K  N KD   +WVKRWNRDKK+EMW N  TGE S+ DPTSSS  RSS AS  S NSTL  GT  YNRRRN LA+RGIYEWEAALN S GKVYY+NNVN     AMP CM+RLGDMT LV+LKLSQNKLRSLPSR D + +
Sbjct:  308 DGNNMPHLAVPPLLKTSNGKDQCASWVKRWNRDKKREMWVNDVTGETSDVDPTSSSVNRSSNASAASVNSTLTVGTFPYNRRRNELAARGIYEWEAALNISTGKVYYINNVNFSHVQAMPACMNRLGDMTRLVSLKLSQNKLRSLPSRLDVNCL 461
[Close]
BLAST of mRNA_M-pyrifera_M_contig1170.3515.1 vs. uniprot
Match: A0A8J2WY50_9STRA (Hypothetical protein n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WY50_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.220e-6
Identity = 28/75 (37.33%), Postives = 42/75 (56.00%), Query Frame = 0 
Query:   82 LVPGTAQYNRRRNALASRGIYEWEAALNTSAGKVYYVNNVNLGTAPAMPTCMDRLGDMTSLVTLKLSQNKLRSLP 156
            L+  T  YN R+  +AS G+ EW    + + G + Y + VN      MP+ +DRLG + SL+ L+   N+LR LP
Sbjct:  623 LITSTVSYNHRKMLIASFGVDEWTVDWSDADGAMVYESAVNSERTIEMPSSLDRLGQLRSLIDLRCDNNQLRDLP 697
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1170.3515.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LE74_ECTSI5.200e-5970.13Leucine rich repeat protein n=1 Tax=Ectocarpus sil... [more]
A0A8J2WY50_9STRA1.220e-637.33Hypothetical protein n=3 Tax=Pelagomonas calceolat... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1170contigM-pyrifera_M_contig1170:24061..28326 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1170.3515.1mRNA_M-pyrifera_M_contig1170.3515.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig1170 24061..28326 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig1170.3515.1 ID=prot_M-pyrifera_M_contig1170.3515.1|Name=mRNA_M-pyrifera_M_contig1170.3515.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=167bp
GLLTSLKHLKLDGNNMPHLAIPPPFKNPNRKDVSTNWVKRWNRDKKKEMW
TNGATGEASEGDPTSSSAERSSTASVSANSTLVPGTAQYNRRRNALASRG
IYEWEAALNTSAGKVYYVNNVNLGTAPAMPTCMDRLGDMTSLVTLKLSQN
KLRSLPSRCDTSSINI*
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