prot_M-pyrifera_M_contig11674.3466.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11674.3466.1
Unique Nameprot_M-pyrifera_M_contig11674.3466.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length366
Homology
BLAST of mRNA_M-pyrifera_M_contig11674.3466.1 vs. uniprot
Match: D7FJF4_ECTSI (Signal recognition particle receptor subunit beta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJF4_ECTSI)

HSP 1 Score: 345 bits (886), Expect = 2.480e-114
Identity = 202/294 (68.71%), Postives = 225/294 (76.53%), Query Frame = 0
Query:   85 GIVAQILASGKGGNPAALSVLKSLLASLEALLSEFGLPSASVVCAALAVATLAFAFVRKVAIDGGXXXXXXALAKKRKGVVLFLGPCGSGKTALCYRLSHDQAA---PTVTSMQACKYDGS-----RLIEDRGSPPVS------LVDYPGHERLRGGVGEELRLADRVVFVLDGSCLVAQIAAGAELLYDILIDPSLEGCRGLMLALNKSDIKEAKVSRAKVLLQKELEKLRGTRXXXXTQGQEDDMPVATALGRPGQPFSLEVDSPCEVVVAACSVVGEGGLDPVVEFVRASV 364
            G+VAQ LAS      A LS L+SLLASLE+ L+E+GLPSAS+V   +A+A      + KV I   XXXXXX    KRKGVVLFLGPCGSGKTA+CYRLSH       PT TSM+AC+Y  S      L+   G+ P S      LVDYPGHERLRGGVGEELR ADRVVF+LDGSCL AQ+AAGAELLYD+L DPSLEGC+GLMLALNKSD+KEAK SRAK LLQKEL+KLRGTR    TQG+EDDMPVA ALGRPGQPFSLEVDSPCEVVVA CSV  EGGLD VV+FVRAS+
Sbjct:   68 GVVAQALASNSDKAAAVLSQLESLLASLESFLAEYGLPSASLVFPGVAIAIFLLVLLGKVGIXXXXXXXXXX---KRKGVVLFLGPCGSGKTAMCYRLSHGGETGLVPTATSMEACRYPCSSGRLSELLARNGNGPSSSARSGSLVDYPGHERLRGGVGEELRGADRVVFMLDGSCLAAQVAAGAELLYDVLTDPSLEGCQGLMLALNKSDLKEAKASRAKTLLQKELDKLRGTRGMLGTQGEEDDMPVAMALGRPGQPFSLEVDSPCEVVVAGCSVAKEGGLDSVVDFVRASL 358          
BLAST of mRNA_M-pyrifera_M_contig11674.3466.1 vs. uniprot
Match: A0A835YTM3_9STRA (Signal recognition particle receptor subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTM3_9STRA)

HSP 1 Score: 133 bits (335), Expect = 4.100e-34
Identity = 80/175 (45.71%), Postives = 108/175 (61.71%), Query Frame = 0
Query:  189 PTVTSMQACKYDGSRLIEDRGSP-PVSLVDYPGHERLRGGVGEELRLADRVVFVLDGSCLVAQIAAGAELLYDILIDPSLEGCRGLMLALNKSDIKEAKVSRAKVLLQKELEKLRGTRXXXXTQGQEDDMPVAT--ALGRPGQPFSLEVDSPCEVVVAACSVVGEGGLDPVVEFV 360
            P+  S+ A   DG+    D  S   V++ D+PGHERLRGG+  EL  +  V+F+LDG+ L +Q+  G E+LYDIL D S+E C+GL +  +K+D+K AK  R +  L KELE+LR TR     QG+ED     +   LGR GQP  L VD PC + V  CSV GEG L+ V +F+
Sbjct:    3 PSSLSIHA---DGTPDATDGSSKGSVTVTDFPGHERLRGGLRGELATSTAVIFMLDGTDLSSQVRLGGEMLYDILTDSSIERCKGLAIGCSKADLKVAKPDRVRAALTKELEQLRTTRWSIGMQGEEDTGRPNSFIPLGRQGQPLDLVVDCPCPLTVFTCSVKGEG-LNAVRDFI 173          
BLAST of mRNA_M-pyrifera_M_contig11674.3466.1 vs. uniprot
Match: A0A6G0XMT9_9STRA (Signal recognition particle receptor subunit beta n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XMT9_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.990e-29
Identity = 83/233 (35.62%), Postives = 132/233 (56.65%), Query Frame = 0
Query:  133 VATLAFAFVRKVAIDGGXXXXXXALAKKRKGVVLFLGPCGSGKTALCYRLSHDQAA-PTVTSMQACKYDGSRLIEDRGSPPVSLVDYPGHERLRGGVGEELRLADRVVFVLDGSCLV--AQIAAGAELLYDILIDPSL-EGCRGLMLALNKSDIKEAKV-SRAKVLLQKELEKLRGTRXXXXTQGQEDDMPVATALGRPGQPFSLEVDSPCEVVVAACSVVGEGGLDPVVEFV 360
            V  L  AF+ K+A  G          + ++ V+L LGPCGSGKTAL +RL     +  TVTSM+      +  + D  +  VS++D+PGHERLR    +   +A ++VF++D + +    Q+   AE L+DI   P L +    +++A +K+D   A   SR ++LL+ EL +L+GTR    TQ  ++ +P    LGR   PF+ +VD+PCEVV  + S+    G+ P+++F+
Sbjct:   20 VLLLLVAFIIKLAASGSGP-------RGKRDVILLLGPCGSGKTALFHRLRDGAVSVETVTSMKETME--TFPLHDEETANVSVLDFPGHERLRSQAPQFYPIAKKIVFIVDATTVSDPLQVRKAAEFLFDIFTHPKLNDNGIPVLIACSKADQATAAAPSRIQLLLEAELTQLKGTRASLDTQDDDESIP----LGRENVPFAFDVDAPCEVVFESYSIHTPNGVAPLLDFI 239          
BLAST of mRNA_M-pyrifera_M_contig11674.3466.1 vs. uniprot
Match: A0A024TLZ7_9STRA (Signal recognition particle receptor subunit beta n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024TLZ7_9STRA)

HSP 1 Score: 120 bits (301), Expect = 2.050e-28
Identity = 82/234 (35.04%), Postives = 128/234 (54.70%), Query Frame = 0
Query:  132 AVATLAFAFVRKVAIDGGXXXXXXALAKKRKGVVLFLGPCGSGKTALCYRLSHDQA-APTVTSMQACKYDGSRLIEDRGSPPVSLVDYPGHERLRGGVGEELRLADRVVFVLDGSCL--VAQIAAGAELLYDILIDPSL-EGCRGLMLALNKSDIKEAKV-SRAKVLLQKELEKLRGTRXXXXTQGQEDDMPVATALGRPGQPFSLEVDSPCEVVVAACSVVGEGGLDPVVEFV 360
            AV  L  AF+ K+A  G            ++ V+L LGPCG GKTAL +RL    +   TVTSM+          E+  +  VS++D+PGHERLR  V +   +A ++VFV+D + +   AQ+   AE LYDI + P + +    L++A +K+D+  A   S  + LL+ EL +L+ TR        ++ +P    LGR   PF+ +VD+PCEVV  + S+     + P+++F+
Sbjct:   19 AVLVLLLAFIIKLAASGSSPGG-------KRDVILLLGPCGGGKTALFHRLRDGPSKVDTVTSMKETLETFPLFDEEAAT--VSVLDFPGHERLRSQVSQFYPIAKKLVFVVDATTVGDAAQVRKAAEFLYDIFVHPKVHDNGIPLLVACSKADVATAATPSHIQSLLETELSQLKSTRASLEAHDDDESIP----LGRENVPFAFDVDAPCEVVFESYSIHSAEAIAPLLDFI 239          
BLAST of mRNA_M-pyrifera_M_contig11674.3466.1 vs. uniprot
Match: A0A485KDV8_9STRA (Signal recognition particle receptor subunit beta n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDV8_9STRA)

HSP 1 Score: 119 bits (298), Expect = 5.680e-28
Identity = 81/234 (34.62%), Postives = 128/234 (54.70%), Query Frame = 0
Query:  132 AVATLAFAFVRKVAIDGGXXXXXXALAKKRKGVVLFLGPCGSGKTALCYRLSHDQAAPTVTSMQACKYD-GSRLIEDRGSPPVSLVDYPGHERLRGGVGEELRLADRVVFVLDGSCLV--AQIAAGAELLYDILIDPSLEGCR-GLMLALNKSDIKEAKV-SRAKVLLQKELEKLRGTRXXXXTQGQEDDMPVATALGRPGQPFSLEVDSPCEVVVAACSVVGEGGLDPVVEFV 360
            AV  L  AF+ K+A  G            ++ V+L +GPCG GKTAL +RL  D  +PT+ ++ + K    S  + D  S  VS++D+PGHERLR  V +   +A ++VFV+D + +   AQ+   AE L+D+   P L      +++A +KSD+  A    R + LL+ EL +L+ TR        ++ +P    LGR   PF+ +VD+PCEVV    S+     + P+++F+
Sbjct:   19 AVLLLLVAFIIKMAASGSGPGG-------KRDVILLVGPCGGGKTALFHRL-RDGPSPTLETVTSMKETLESFPLFDEDSANVSVLDFPGHERLRSQVSQFYPIAKKLVFVVDSTTVSDPAQVRKAAEFLFDVFTHPKLNDTAIPVLIACSKSDLTTAAAPGRIQSLLEAELTQLKSTRASLEAHDDDESIP----LGRDNVPFAFDVDAPCEVVFETYSIHSAEAIAPLLDFI 240          
BLAST of mRNA_M-pyrifera_M_contig11674.3466.1 vs. uniprot
Match: A0A1V9ZHQ0_9STRA (Signal recognition particle receptor subunit beta n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZHQ0_9STRA)

HSP 1 Score: 115 bits (287), Expect = 2.170e-26
Identity = 78/238 (32.77%), Postives = 123/238 (51.68%), Query Frame = 0
Query:  130 ALAVATLAFAFVRKVAIDGGXXXXXXALAKKRKGVVLFLGPCGSGKTALCYRLSHDQA-APTVTSMQACKYDGSRLIEDRGSPPVSLVDYPGHERLRGGVGEELRLADRVVFVLDGSCL--VAQIAAGAELLYDILIDPSLEGCR-GLMLALNKSD-IKEAKVSRAKVLLQKELEKLRGTRXXXXTQGQEDDMPVATALGRPGQPFSLEVDSPCEVVVAACSVVGEGGLDPVVEFVRA 362
            A A A L   FV      GG       +   ++ +VL +GPCG+GKTAL +RL        TVTSM+          E+  +   ++ D+PGHER+R   G+   +A +++FV+D +       I   AE LYDI   P +      +M+A +KSD  K A  +  + LL+ EL +L+ TR      G++D+   +  LGR   PF+ ++D+PCEV     S+V    L+P+++F+ +
Sbjct:   15 AAAGAALVLFFVLLKLCSGGS-----GIRSSKRDIVLLVGPCGAGKTALFHRLRDGPTKVTTVTSMKETMEKFPLFDEENAT--FNICDFPGHERMRSQAGQFYPIAKKIIFVVDSTTANDAGHIRKAAEFLYDIFTHPKVNDAGVPVMIACSKSDETKAATSATVRSLLESELTQLKSTRASLEAHGEDDE---SIPLGRDNAPFAFDIDAPCEVTFENYSIVTPEALNPLLDFIMS 242          
BLAST of mRNA_M-pyrifera_M_contig11674.3466.1 vs. uniprot
Match: W7U264_9STRA (Signal recognition particle receptor subunit beta n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U264_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.320e-24
Identity = 76/208 (36.54%), Postives = 118/208 (56.73%), Query Frame = 0
Query:  159 KKRKGVVLFLGPCGSGKTALCYRLSHDQAAPTVTSMQACKYDGSRLIEDRGSPPVSLVDYPGHERLRGGVGEELRLADRV---VFVLDGSCLVA-QIAAGAELLYDILIDPSLEGCRGLMLALNKSDIKEAKV-SRAKVLLQKELEKLRGTRXXXXTQGQEDDMPVATALGRPGQPFSLEVDSPCEVVVAACSVVGE---GGLDPVVE 358
            + R   V+ LGPCG+GKTAL ++L ++    TVTSM     +   +++D+    + LVD+PGHERLRGG  ++   A +V   +FV+D +     ++   AE LYDIL   +++    L++A +KSD+  AK  +R K LL  ELE+LR T+      G  ++      LGR   P +L+VD+P E+  A+ +V  +   GG D + E
Sbjct:  117 RARPSHVVLLGPCGAGKTALYHQLLYNTVPETVTSM----VESEGILKDKD---IRLVDFPGHERLRGGWKKQFLDAGKVAGVIFVVDAADFSTHKVREAAEFLYDILTHAAMDDGPPLLVACHKSDLPGAKAPARIKALLTSELERLRKTQGGAMMDGNGEEEEDRLPLGRVAVPLNLDVDAPSELTFASTNVAQQTQFGGNDAIEE 317          
BLAST of mRNA_M-pyrifera_M_contig11674.3466.1 vs. uniprot
Match: A0A7S3JR42_9STRA (Signal recognition particle receptor subunit beta (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JR42_9STRA)

HSP 1 Score: 107 bits (268), Expect = 5.750e-24
Identity = 76/189 (40.21%), Postives = 98/189 (51.85%), Query Frame = 0
Query:  159 KKRKGVVLFLGPCGSGKTALCYRLSHDQAAPTVTSMQACKYDGSRLIEDRGSP---PVSLVDYPGHERLRGGVGEELRLADRVVFVLDGSCLVAQIAAGAELLYDIL--IDPSLEGCRGLMLALNKSDIKEAKVS-RAKVLLQKELEKLRGTRXXXXTQGQEDDMPVATA-LGRPGQPFSLEVDSPCEV 340
            + R   +L +GPCGSGKT L YRL HD+   TV+SMQ          E   SP   P+ LVD PGH RLRG + +EL  A  ++FV D S  + Q    AELLY IL     S  G   L+   NKSD K  K + R K+++  E+E LR T     +           A LG PGQ F+ +  SPC++
Sbjct:   28 RTRSASILIVGPCGSGKTLLFYRLVHDETVDTVSSMQP--------NESPASPDGLPLRLVDLPGHYRLRGLLPDELECAQAIIFVFDASDALKQAKPAAELLYAILSTFADSKTG-PDLLFICNKSDNKVVKTTQRVKLMMMNEIETLRKTENSIQSTADGASSSSEQAKLGIPGQFFNFDAHSPCKI 207          
BLAST of mRNA_M-pyrifera_M_contig11674.3466.1 vs. uniprot
Match: A0A8K1FBH7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBH7_PYTOL)

HSP 1 Score: 108 bits (270), Expect = 7.660e-24
Identity = 82/207 (39.61%), Postives = 108/207 (52.17%), Query Frame = 0
Query:  161 RKGVVLFLGPCGSGKTALCYRLSHDQAAPTVTSMQACKYDGSRLIEDRGSP-----PVSLVDYPGHERLRGGVGEELRLADRVVFVLDGSCLVAQIAAGAELLYDILIDPSLEGCRGLML-ALNKSDIKEAK-VSRAKVLLQKELEKLRGTRXXXXTQGQEDDMPVATALGRPGQPFSLEVDSPCEVVVAACSVVGEGGLDPVVEFV 360
            +K + + LGP G+GKTAL ++L   +   TVTSM   + +G   + DR +       +S+VDYPGHERLR  V +   +   VVFV+D +         AE LYDI  +         ML A NK+DIK A  V   K  L+KEL KL+ TR    T+G+ED   V   +GR G  F   VD+PCEV     S    G +D V  FV
Sbjct:   53 KKKMTMLLGPRGAGKTALFHQLRDGRFVETVTSMT--ELEGKFAVHDRYNTINFGAHLSIVDYPGHERLRSRVADYYPVTGCVVFVVDAAD--QSFRKAAEYLYDIFSNAKFNDLAPRMLIACNKTDIKSAATVEVVKEALEKELTKLKKTRSSLETEGEEDTSVVP--VGRDGVAFEFAVDAPCEVTFVKSSFKA-GDVDDVATFV 252          
BLAST of mRNA_M-pyrifera_M_contig11674.3466.1 vs. uniprot
Match: A0A067D7V6_SAPPC (Signal recognition particle receptor subunit beta n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D7V6_SAPPC)

HSP 1 Score: 105 bits (262), Expect = 8.060e-23
Identity = 67/202 (33.17%), Postives = 109/202 (53.96%), Query Frame = 0
Query:  164 VVLFLGPCGSGKTALCYRLSHDQA-APTVTSMQACKYDGSRLIEDRGSPPVSLVDYPGHERLRGGVGEELRLADRVVFVLDGSCL--VAQIAAGAELLYDILIDPSLEGCR-GLMLALNKSD-IKEAKVSRAKVLLQKELEKLRGTRXXXXTQGQEDDMPVATALGRPGQPFSLEVDSPCEVVVAACSVVGEGGLDPVVEFV 360
            VVL +GPCG+GKTAL +RL +      TVTSM+          E+  +  +S+ D+PGHER+R    +   +A +++FV+D +     + I   AE LYDI   P +      +M+A +K+D +K A  +  + LL+ EL +L+ TR      G +D+   +  LGR    F   +D+PC+V     S+     L+P+++F+
Sbjct:   44 VVLLVGPCGAGKTALFHRLRNGPTKVETVTSMKETMETFPLFDEENAT--ISICDFPGHERMRSTATQFYPIAKKIIFVVDATTANDASHIRKAAEFLYDIFTHPKINDAGVPVMIACSKTDDVKAATPATVQSLLETELTQLKSTRASLEAHGDDDE---SIPLGRDNALFEFAIDAPCDVTFEGYSIQTPDALNPLLDFI 240          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11674.3466.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJF4_ECTSI2.480e-11468.71Signal recognition particle receptor subunit beta ... [more]
A0A835YTM3_9STRA4.100e-3445.71Signal recognition particle receptor subunit beta ... [more]
A0A6G0XMT9_9STRA1.990e-2935.62Signal recognition particle receptor subunit beta ... [more]
A0A024TLZ7_9STRA2.050e-2835.04Signal recognition particle receptor subunit beta ... [more]
A0A485KDV8_9STRA5.680e-2834.62Signal recognition particle receptor subunit beta ... [more]
A0A1V9ZHQ0_9STRA2.170e-2632.77Signal recognition particle receptor subunit beta ... [more]
W7U264_9STRA1.320e-2436.54Signal recognition particle receptor subunit beta ... [more]
A0A7S3JR42_9STRA5.750e-2440.21Signal recognition particle receptor subunit beta ... [more]
A0A8K1FBH7_PYTOL7.660e-2439.61Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A067D7V6_SAPPC8.060e-2333.17Signal recognition particle receptor subunit beta ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 163..297
e-value: 7.9E-12
score: 43.2
IPR019009Signal recognition particle receptor, beta subunitPFAMPF09439SRPRBcoord: 162..331
e-value: 9.7E-25
score: 87.0
IPR019009Signal recognition particle receptor, beta subunitPANTHERPTHR11485:SF34SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT BETAcoord: 117..348
NoneNo IPR availableGENE3D3.40.50.300coord: 157..362
e-value: 2.2E-40
score: 140.4
NoneNo IPR availablePANTHERPTHR11485TRANSFERRINcoord: 117..348
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 67..118
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..46
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 142..365
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..66
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 119..141
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 165..306

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11674contigM-pyrifera_M_contig11674:2340..3437 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11674.3466.1mRNA_M-pyrifera_M_contig11674.3466.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11674 2340..3437 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11674.3466.1 ID=prot_M-pyrifera_M_contig11674.3466.1|Name=mRNA_M-pyrifera_M_contig11674.3466.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=366bp
MLETTTVHVAPMVLHHGRRMDAASSSSGGGCSSGSGCCSSSSRADFWMLR
VAIALLASSTFVASSSTGEELGAETLSSSASAEDGIVAQILASGKGGNPA
ALSVLKSLLASLEALLSEFGLPSASVVCAALAVATLAFAFVRKVAIDGGG
GGSGGALAKKRKGVVLFLGPCGSGKTALCYRLSHDQAAPTVTSMQACKYD
GSRLIEDRGSPPVSLVDYPGHERLRGGVGEELRLADRVVFVLDGSCLVAQ
IAAGAELLYDILIDPSLEGCRGLMLALNKSDIKEAKVSRAKVLLQKELEK
LRGTRGTLGTQGQEDDMPVATALGRPGQPFSLEVDSPCEVVVAACSVVGE
GGLDPVVEFVRASVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005225Small_GTP-bd_dom
IPR019009SRP_receptor_beta_su
IPR027417P-loop_NTPase