prot_M-pyrifera_M_contig115061.3136.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig115061.3136.1
Unique Nameprot_M-pyrifera_M_contig115061.3136.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length180
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig115061.3136.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 6..42
e-value: 250.0
score: 1.9
coord: 136..173
e-value: 16.0
score: 9.4
coord: 97..133
e-value: 77.0
score: 5.1
coord: 51..90
e-value: 0.024
score: 23.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 58..89
score: 9.138
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..180
e-value: 3.8E-21
score: 77.2
NoneNo IPR availablePANTHERPTHR19848WD40 REPEAT PROTEINcoord: 20..123
coord: 65..164
IPR011044Quinoprotein amine dehydrogenase, beta chain-likeSUPERFAMILY50969YVTN repeat-like/Quinoprotein amine dehydrogenasecoord: 2..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig115061contigM-pyrifera_M_contig115061:25..564 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig115061.3136.1mRNA_M-pyrifera_M_contig115061.3136.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig115061 1..564 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig115061.3136.1 ID=prot_M-pyrifera_M_contig115061.3136.1|Name=mRNA_M-pyrifera_M_contig115061.3136.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=180bp
MLWDGDGEKVGEVRNPDGKALYLVRFSPDGHHVLCGGNGGWTSPVILSVP
DLRVVGECRGGGGTVYGGAWMPDGETVVAGGADDVMRVWGKEGGYVACEK
RMRLGRVFSVDVHPDGREYAVGFDEGKNVVIFSVANHEELRRIAIPDEVR
SARYSPDGGRLAVAHYSGLVMVDSVSGEEL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR011044Quino_amine_DH_bsu