prot_M-pyrifera_M_contig113572.2835.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig113572.2835.1
Unique Nameprot_M-pyrifera_M_contig113572.2835.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length136
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113572.2835.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002151Kinesin light chainPRINTSPR00381KINESINLIGHTcoord: 86..106
score: 49.05
coord: 42..59
score: 64.44
coord: 121..136
score: 21.82
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 88..121
e-value: 3.4E-4
score: 29.9
coord: 4..37
e-value: 3.5
score: 16.6
coord: 46..79
e-value: 32.0
score: 10.5
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 4..37
score: 7.169
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 88..121
score: 8.998
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 46..79
score: 7.169
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..136
e-value: 9.6E-52
score: 177.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 1..117
NoneNo IPR availablePFAMPF13424TPR_12coord: 6..78
e-value: 1.4E-19
score: 70.2
coord: 87..134
e-value: 8.4E-10
score: 38.8
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 1..133
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..121
score: 16.537

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113572contigM-pyrifera_M_contig113572:170..577 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113572.2835.1mRNA_M-pyrifera_M_contig113572.2835.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig113572 170..577 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig113572.2835.1 ID=prot_M-pyrifera_M_contig113572.2835.1|Name=mRNA_M-pyrifera_M_contig113572.2835.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=136bp
PDVGQNLNGLASVYYHQGLYTDAESLYENALTKNENAFGPNHPEVATNLN
NLAVLYEAQGQYLRAEEMNMRALAIREKTLGVEHPDVAISVNNLAVLYEH
QGQFEQAESFYKRALQILEGTVGSHHPNVVTTLESM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002151Kinesin_light
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom