prot_M-pyrifera_M_contig113570.2834.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig113570.2834.1
Unique Nameprot_M-pyrifera_M_contig113570.2834.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length109
Homology
BLAST of mRNA_M-pyrifera_M_contig113570.2834.1 vs. uniprot
Match: A0A2D5B0L4_9BACT (23S rRNA (Uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5B0L4_9BACT)

HSP 1 Score: 118 bits (296), Expect = 4.950e-29
Identity = 59/109 (54.13%), Postives = 74/109 (67.89%), Query Frame = 0
Query:    1 MDFTFGAQKWVELAPGETLGETLGDAASSTARGTLDFALGLHAPGRHDKVLDIQHCAIAFPEASEILNVARELALEHGLAPWDLSAHTGLLRHLVVRKGFRTGEVLVYL 109
            MDFTFG ++W+E +  E +                DFALGLH PGR+DKVLD+Q C IAF EA+ ILN ARELALE GL+ WD+ AH GLLRHL++R+ F +GE+L  L
Sbjct:  182 MDFTFGNRRWIETSEPEGVAS--------------DFALGLHVPGRYDKVLDVQSCDIAFKEATPILNTARELALEAGLSGWDVHAHDGLLRHLLLRRSFASGEILAAL 276          
BLAST of mRNA_M-pyrifera_M_contig113570.2834.1 vs. uniprot
Match: A0A800KKH8_9BACT (23S rRNA (Uracil(1939)-C(5))-methyltransferase RlmD n=4 Tax=cellular organisms TaxID=131567 RepID=A0A800KKH8_9BACT)

HSP 1 Score: 118 bits (295), Expect = 5.980e-29
Identity = 61/109 (55.96%), Postives = 69/109 (63.30%), Query Frame = 0
Query:    1 MDFTFGAQKWVELAPGETLGETLGDAASSTARGTLDFALGLHAPGRHDKVLDIQHCAIAFPEASEILNVARELALEHGLAPWDLSAHTGLLRHLVVRKGFRTGEVLVYL 109
            MDFTFG ++W+E+   E +                DFALGLH PG + KVLDIQ CAI F  A EIL  ARELA EHGL  WD   H GLLRHLV+RKG  TGE+LVYL
Sbjct:  176 MDFTFGNRRWIEVGEPEGV--------------QSDFALGLHVPGVYSKVLDIQSCAIHFEGADEILTAARELAREHGLEAWDTRRHVGLLRHLVLRKGVNTGEILVYL 270          
BLAST of mRNA_M-pyrifera_M_contig113570.2834.1 vs. uniprot
Match: A0A2D5ARJ6_9BACT (23S rRNA (Uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5ARJ6_9BACT)

HSP 1 Score: 116 bits (290), Expect = 2.200e-28
Identity = 58/107 (54.21%), Postives = 70/107 (65.42%), Query Frame = 0
Query:    1 MDFTFGAQKWVELAPGETLGETLGDAASSTARGTLDFALGLHAPGRHDKVLDIQHCAIAFPEASEILNVARELALEHGLAPWDLSAHTGLLRHLVVRKGFRTGEVLV 107
            MDFTFGA +WVE+   E +                DFALG+H  GR D+VLDIQ CA+ F EA  +L  ARE+A  HGL PWD+  HTGLLRHLV+RKGF TGE++V
Sbjct:  134 MDFTFGATRWVEVGEPEGV--------------ERDFALGMHVSGRFDRVLDIQSCALHFDEADGLLTSAREVARAHGLPPWDVLRHTGLLRHLVLRKGFGTGEIMV 226          
BLAST of mRNA_M-pyrifera_M_contig113570.2834.1 vs. uniprot
Match: A0A523PTR2_9BACT (23S rRNA (Uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PTR2_9BACT)

HSP 1 Score: 115 bits (287), Expect = 6.300e-28
Identity = 60/106 (56.60%), Postives = 67/106 (63.21%), Query Frame = 0
Query:    1 MDFTFGAQKWVELAPGETLGETLGDAASSTARGTLDFALGLHAPGRHDKVLDIQHCAIAFPEASEILNVARELALEHGLAPWDLSAHTGLLRHLVVRKGFRTGEVL 106
            MDFTF  ++WVE              A        DFALGLH P R DKVLDI+ CAI F EA  +L   RELALE GL PWD  AHTGLLRHLV+RKGFRTGE++
Sbjct:  143 MDFTFSNRRWVE--------------ADEPEGARADFALGLHVPFRWDKVLDIRACAIHFREADALLASTRELALEQGLEPWDTKAHTGLLRHLVLRKGFRTGEIM 234          
BLAST of mRNA_M-pyrifera_M_contig113570.2834.1 vs. uniprot
Match: A0A518EQN2_9BACT (23S rRNA (Uracil-C(5))-methyltransferase RlmCD n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518EQN2_9BACT)

HSP 1 Score: 114 bits (286), Expect = 1.150e-27
Identity = 60/109 (55.05%), Postives = 76/109 (69.72%), Query Frame = 0
Query:    1 MDFTFGAQKWVELAPGETLGETLGDAASSTARGTLDFALGLHAPGRHDKVLDIQHCAIAFPEASEILNVARELALEHGLAPWDLSAHTGLLRHLVVRKGFRTGEVLVYL 109
            MDFTFG+++++         E  G  AS        F LGLHAPG + KVLD++HCAIAF  ASEI+  ARELA+E GL+PWDL +HTGLLRHLV+R+G RTGE ++ L
Sbjct:  175 MDFTFGSKRYILEH------EPQGVDAS--------FGLGLHAPGLYQKVLDVEHCAIAFEGASEIVRAARELAIERGLSPWDLKSHTGLLRHLVLRRGERTGETMINL 269          
BLAST of mRNA_M-pyrifera_M_contig113570.2834.1 vs. uniprot
Match: A0A800MGR7_9BACT (23S rRNA (Uracil(1939)-C(5))-methyltransferase RlmD n=2 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A800MGR7_9BACT)

HSP 1 Score: 113 bits (283), Expect = 2.910e-27
Identity = 57/107 (53.27%), Postives = 68/107 (63.55%), Query Frame = 0
Query:    1 MDFTFGAQKWVELAPGETLGETLGDAASSTARGTLDFALGLHAPGRHDKVLDIQHCAIAFPEASEILNVARELALEHGLAPWDLSAHTGLLRHLVVRKGFRTGEVLV 107
            MDFTFG+++W+E    + +                DF LGLH PGR DKVLDI+ C IAFPEAS ILN AR  A +  L PWD+    GLLRHLV+RKGF TGE+LV
Sbjct:  168 MDFTFGSRRWIEEHEEQGV--------------VADFGLGLHVPGRWDKVLDIEECLIAFPEASAILNSARRYARQQNLDPWDVKESRGLLRHLVLRKGFHTGEILV 260          
BLAST of mRNA_M-pyrifera_M_contig113570.2834.1 vs. uniprot
Match: A0A2D6HDH6_9BACT (23S rRNA (Uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HDH6_9BACT)

HSP 1 Score: 112 bits (279), Expect = 8.520e-27
Identity = 55/109 (50.46%), Postives = 70/109 (64.22%), Query Frame = 0
Query:    1 MDFTFGAQKWVELAPGETLGETLGDAASSTARGTLDFALGLHAPGRHDKVLDIQHCAIAFPEASEILNVARELALEHGLAPWDLSAHTGLLRHLVVRKGFRTGEVLVYL 109
            M+FTF A++W+E    E +                DFALGLH PGRHDKV+D++ C IAF EA  I+  AR+LA E GLAPW+L  HTGLLRHLV+RK   + ++L YL
Sbjct:  143 MEFTFAARRWIEAGEPEGV--------------DADFALGLHVPGRHDKVMDVEECVIAFGEAQGIVRDARDLAREAGLAPWNLRDHTGLLRHLVLRKASHSDQILAYL 237          
BLAST of mRNA_M-pyrifera_M_contig113570.2834.1 vs. uniprot
Match: A0A7C2AL49_9BACT (23S rRNA (Uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C2AL49_9BACT)

HSP 1 Score: 105 bits (262), Expect = 2.370e-24
Identity = 55/107 (51.40%), Postives = 67/107 (62.62%), Query Frame = 0
Query:    1 MDFTFGAQKWVELAPGETLGETLGDAASSTARGTLDFALGLHAPGRHDKVLDIQHCAIAFPEASEILNVARELALEHGLAPWDLSAHTGLLRHLVVRKGFRTGEVLV 107
            MDFTFG ++WVE   GE  G               DFA+GLH PGR+DK+LDI+ C IAF  A+ IL   R LA EH L  WD+  H GLLRHLV+R G R+G++LV
Sbjct:  148 MDFTFGNRRWVE--EGEPEGAE------------RDFAVGLHVPGRYDKILDIRRCEIAFEAANPILGTVRRLAREHDLDAWDVREHRGLLRHLVLRHGVRSGDILV 240          
BLAST of mRNA_M-pyrifera_M_contig113570.2834.1 vs. uniprot
Match: A0A518BQ94_9BACT (23S rRNA (Uracil-C(5))-methyltransferase RlmCD n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BQ94_9BACT)

HSP 1 Score: 103 bits (256), Expect = 1.700e-23
Identity = 54/109 (49.54%), Postives = 67/109 (61.47%), Query Frame = 0
Query:    1 MDFTFGAQKWVELAPGETLGETLGDAASSTARGTLDFALGLHAPGRHDKVLDIQHCAIAFPEASEILNVARELALEHGLAPWDLSAHTGLLRHLVVRKGFRTGEVLVYL 109
            MDFTF A++WVE    E      GD   +      DF LGLHA GRHDKVLD+  C+I F     +L   RELAL  GL PWD ++H+G LRHLV+R G  +GEV+ +L
Sbjct:  170 MDFTFSAKRWVERREPEG-----GDGRRT------DFGLGLHARGRHDKVLDVSACSIQFSGGDGLLATVRELALASGLEPWDTASHSGYLRHLVLRHGVHSGEVMAHL 267          
BLAST of mRNA_M-pyrifera_M_contig113570.2834.1 vs. uniprot
Match: A0A2E5X323_9BACT (23S rRNA (Uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E5X323_9BACT)

HSP 1 Score: 98.6 bits (244), Expect = 7.280e-22
Identity = 54/109 (49.54%), Postives = 65/109 (59.63%), Query Frame = 0
Query:    1 MDFTFGAQKWVELAPGETLGETLGDAASSTARGTLDFALGLHAPGRHDKVLDIQHCAIAFPEASEILNVARELALEHGLAPWDLSAHTGLLRHLVVRKGFRTGEVLVYL 109
            MDFTFG ++WVE+          G+A         DFALGLH  G + KV+DI  C I F     IL   R L LE GL PWD+  HTGLLRH+V+RKG  TGEV+V+L
Sbjct:  147 MDFTFGTRRWVEV----------GEAGDKPR----DFALGLHVGGLYRKVVDIDACPIQFTGGDGILADVRRLCLEAGLEPWDVVEHTGLLRHVVLRKGQATGEVMVFL 241          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig113570.2834.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D5B0L4_9BACT4.950e-2954.1323S rRNA (Uracil(1939)-C(5))-methyltransferase Rlm... [more]
A0A800KKH8_9BACT5.980e-2955.9623S rRNA (Uracil(1939)-C(5))-methyltransferase Rlm... [more]
A0A2D5ARJ6_9BACT2.200e-2854.2123S rRNA (Uracil(1939)-C(5))-methyltransferase Rlm... [more]
A0A523PTR2_9BACT6.300e-2856.6023S rRNA (Uracil(1939)-C(5))-methyltransferase Rlm... [more]
A0A518EQN2_9BACT1.150e-2755.0523S rRNA (Uracil-C(5))-methyltransferase RlmCD n=1... [more]
A0A800MGR7_9BACT2.910e-2753.2723S rRNA (Uracil(1939)-C(5))-methyltransferase Rlm... [more]
A0A2D6HDH6_9BACT8.520e-2750.4623S rRNA (Uracil(1939)-C(5))-methyltransferase Rlm... [more]
A0A7C2AL49_9BACT2.370e-2451.4023S rRNA (Uracil(1939)-C(5))-methyltransferase Rlm... [more]
A0A518BQ94_9BACT1.700e-2349.5423S rRNA (Uracil-C(5))-methyltransferase RlmCD n=1... [more]
A0A2E5X323_9BACT7.280e-2249.5423S rRNA (Uracil(1939)-C(5))-methyltransferase Rlm... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.1350.30coord: 31..109
e-value: 2.9E-21
score: 77.8
NoneNo IPR availablePANTHERPTHR11061:SF30TRNA (URACIL(54)-C(5))-METHYLTRANSFERASEcoord: 8..108
IPR010280(Uracil-5)-methyltransferase familyPANTHERPTHR11061RNA M5U METHYLTRANSFERASEcoord: 8..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig113570contigM-pyrifera_M_contig113570:33..578 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig113570.2834.1mRNA_M-pyrifera_M_contig113570.2834.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig113570 21..578 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig113570.2834.1 ID=prot_M-pyrifera_M_contig113570.2834.1|Name=mRNA_M-pyrifera_M_contig113570.2834.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=109bp
MDFTFGAQKWVELAPGETLGETLGDAASSTARGTLDFALGLHAPGRHDKV
LDIQHCAIAFPEASEILNVARELALEHGLAPWDLSAHTGLLRHLVVRKGF
RTGEVLVYL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010280U5_MeTrfase_fam