prot_M-pyrifera_M_contig11242.2596.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11242.2596.1
Unique Nameprot_M-pyrifera_M_contig11242.2596.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length268
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig11242.2596.1 vs. uniprot
Match: D8LHU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHU0_ECTSI)

HSP 1 Score: 347 bits (890), Expect = 7.210e-110
Identity = 181/268 (67.54%), Postives = 218/268 (81.34%), Query Frame = 0 
Query:    1 MKMGGRLLRRVMGMYRDDAVASNSMVLAEELSQRLFDADESLVDVRRGWDNLMWNLEIDDNDNDGEEAVALAMNGVLSALVEKLIQAGMEKPSAKTAELCARLGMGDEAMANAFSIVSGDIFESSLLGLLRGQARTFFRFFGTVADGTPTVLFRSEPLTQEELQGLKETAVKVGVSESAALEVVAKELKVSLTNIVTRAGKNMRSNTAKDGARIVGDANDLLAGLCTQVVEAFGGTDVTATLSIAGELASLDEYWASELCFKMVSCRR 268
            +KM  RLLRRVM MY++DAV+SN +VL+EELSQRLFDAD+SL D++  WDNLMWNLEIDD D + E+ +  AM+GVL++LVEKLI+AGME+PSAKTA++CA LG+ DEAM  AFS+VSGDIFE SLL ++R Q        GT ADGT TVLFRS+PLT+EEL+ L  TAV+VGVS   ALEVVAKEL+VSL N+V RAG++MR+N AK+GA+I+GDAN LL GLCTQ+  AFG TD+T TLSIAG LASLDEYW SELCFKMV   R
Sbjct:  630 LKMSSRLLRRVMDMYKNDAVSSNILVLSEELSQRLFDADDSLPDIKLSWDNLMWNLEIDDGDYESEKQMKAAMDGVLASLVEKLIEAGMEQPSAKTAQMCATLGLDDEAMRKAFSLVSGDIFEQSLLKMMRSQ--------GTAADGTRTVLFRSDPLTKEELEELMATAVRVGVSGPMALEVVAKELQVSLKNMVVRAGQSMRNNVAKEGAKIIGDANILLDGLCTQLAGAFGATDITETLSIAGTLASLDEYWTSELCFKMVDAVR 889
[Close]
BLAST of mRNA_M-pyrifera_M_contig11242.2596.1 vs. uniprot
Match: A0A835Z232_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z232_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 1.400e-11
Identity = 48/172 (27.91%), Postives = 83/172 (48.26%), Query Frame = 0 
Query:   99 LCARLGMGDEAMANAFSIVSGDIFESSLLGLLRGQARTFFRFFGTVADGTPTVLFRSEPLTQEELQGLKETAVKVGVSESAALEVVAKELKVSLTNIVTRAGKNMRSNTAKDGARIVGDANDLLAGLCTQVVEAFGGTDVTAT------LSIAGELASLDEYWASELCFKMV 264
            +C  LG+ +  +        G  F  +L  +LR Q +                 +R EPL++ EL  +   A + G+++ AAL+  A+EL+  L +++      MR   A+ G R+V   + +L+GL  Q++ A GG    A       LS+ G+L  + E+W SELC+ ++
Sbjct:  309 VCGFLGVPESKLEGVLQRERGKAFAQALEPVLRPQGK-----------------WRYEPLSEGELGEVTAAAERAGLTQEAALDGAARELRPLLQSLIQAGADLMRREQAEAGRRVVEQLDSVLSGLAAQLLGALGGDGARAEDVLMRRLSLKGDLTEVQEFWMSELCWALI 463
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11242.2596.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHU0_ECTSI7.210e-11067.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z232_9STRA1.400e-1127.91Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11242contigM-pyrifera_M_contig11242:217..9706 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11242.2596.1mRNA_M-pyrifera_M_contig11242.2596.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11242 217..9721 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11242.2596.1 ID=prot_M-pyrifera_M_contig11242.2596.1|Name=mRNA_M-pyrifera_M_contig11242.2596.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=268bp
MKMGGRLLRRVMGMYRDDAVASNSMVLAEELSQRLFDADESLVDVRRGWD
NLMWNLEIDDNDNDGEEAVALAMNGVLSALVEKLIQAGMEKPSAKTAELC
ARLGMGDEAMANAFSIVSGDIFESSLLGLLRGQARTFFRFFGTVADGTPT
VLFRSEPLTQEELQGLKETAVKVGVSESAALEVVAKELKVSLTNIVTRAG
KNMRSNTAKDGARIVGDANDLLAGLCTQVVEAFGGTDVTATLSIAGELAS
LDEYWASELCFKMVSCRR
back to top