prot_M-pyrifera_M_contig112099.2540.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig112099.2540.1
Unique Nameprot_M-pyrifera_M_contig112099.2540.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length192
Homology
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BLAST of mRNA_M-pyrifera_M_contig112099.2540.1 vs. uniprot
Match: A0A7V9A9Y2_9BACT (Uncharacterized protein n=1 Tax=Bremerella alba TaxID=980252 RepID=A0A7V9A9Y2_9BACT)

HSP 1 Score: 67.8 bits (164), Expect = 6.360e-10
Identity = 33/33 (100.00%), Postives = 33/33 (100.00%), Query Frame = 0 
Query:    1 MKSVGQMKNMEVLRTEGAFISDEGMAHLADLTK 33
            MKSVGQMKNMEVLRTEGAFISDEGMAHLADLTK
Sbjct:  175 MKSVGQMKNMEVLRTEGAFISDEGMAHLADLTK 207
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BLAST of mRNA_M-pyrifera_M_contig112099.2540.1 vs. uniprot
Match: UPI001CCBE087 (hypothetical protein n=1 Tax=Bremerella volcania TaxID=2527984 RepID=UPI001CCBE087)

HSP 1 Score: 65.9 bits (159), Expect = 2.960e-9
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0 
Query:    1 MKSVGQMKNMEVLRTEGAFISDEGMAHLADLT 32
            MKSVGQMKNMEVLRTEGAFISDEGMAHLADLT
Sbjct:  180 MKSVGQMKNMEVLRTEGAFISDEGMAHLADLT 211
[Close]
BLAST of mRNA_M-pyrifera_M_contig112099.2540.1 vs. uniprot
Match: A0A2S8F662_9BACT (Uncharacterized protein n=1 Tax=Blastopirellula marina TaxID=124 RepID=A0A2S8F662_9BACT)

HSP 1 Score: 59.3 bits (142), Expect = 5.240e-7
Identity = 29/34 (85.29%), Postives = 31/34 (91.18%), Query Frame = 0 
Query:    1 MKSVGQMKNMEVLRTEGAFISDEGMAHLADLTKM 34
            MK V QMK++EVLRTEGAFISDEGMAHLA LTKM
Sbjct:  180 MKFVAQMKDLEVLRTEGAFISDEGMAHLAGLTKM 213
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig112099.2540.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A7V9A9Y2_9BACT6.360e-10100.00Uncharacterized protein n=1 Tax=Bremerella alba Ta... [more]
UPI001CCBE0872.960e-9100.00hypothetical protein n=1 Tax=Bremerella volcania T... [more]
A0A2S8F662_9BACT5.240e-785.29Uncharacterized protein n=1 Tax=Blastopirellula ma... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 79..100
e-value: 0.38
score: 10.9
coord: 176..192
e-value: 1.1
score: 9.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..109
e-value: 5.1E-18
score: 67.0
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 110..192
e-value: 6.2E-14
score: 53.2
NoneNo IPR availablePANTHERPTHR13318UNCHARACTERIZEDcoord: 120..186
NoneNo IPR availablePANTHERPTHR13318UNCHARACTERIZEDcoord: 8..109
NoneNo IPR availablePANTHERPTHR13318:SF98coord: 8..109
coord: 120..186
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 5..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig112099contigM-pyrifera_M_contig112099:10..585 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig112099.2540.1mRNA_M-pyrifera_M_contig112099.2540.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig112099 1..585 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig112099.2540.1 ID=prot_M-pyrifera_M_contig112099.2540.1|Name=mRNA_M-pyrifera_M_contig112099.2540.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=192bp
MKSVGQMKNMEVLRTEGAFISDEGMAHLADLTKMRFLNLRDKKITDKGIA
YLSGMKNLETLELNEVACSNEGLSHIQECVKLKKLHLFRTKVTDDGMQYL
TEMKDMEDLKFRQSPVRGEQMEQLKGMTKLKRLDVSETPFVDDGVGVVAT
FENLELLNLWNTFITDDGLAPVSNLKKLKDLDLQNCALSDAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf