prot_M-pyrifera_M_contig1117.2446.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig1117.2446.1
Unique Nameprot_M-pyrifera_M_contig1117.2446.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length292
Homology
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BLAST of mRNA_M-pyrifera_M_contig1117.2446.1 vs. uniprot
Match: D7FM67_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM67_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 1.880e-61
Identity = 157/316 (49.68%), Postives = 187/316 (59.18%), Query Frame = 0 
Query:    1 MESPRVSLSFVAVLISVLAHPTCVDGFFVPAPACRPTAAALGSRAMGTSALSSRPEAAPR---RMHEVWRRQASMSAR-----QPGDGAPTGRSQEGGGGSTSRLSRISMRVRKMIRKAVMGYLPEEEMSYKQTTAKAAAEAAALRDQYEVANPRLQADGLKAQGAAAEAVD----------NFEDEDDILGEG-FVRLNIGDQTPKEAEDAMMSLRKRLEQQLPPDTDKEQAEKRRIAMQNQQNQQKAKEGPLKPPRFDGDTAVAERPSPTDGARQS------PEVPRETPKLASAEDVERLNRMFGSMGGEPLR 291
            M   ++S+SF+AVLI+V      VDGF  P P    T A +  RAM T+   S      R   R  E  RRQASMSA       PG     G  Q+GG     RLSRIS RVRK+IR+AVMGYLPEEE+SYKQ   +  A AA LR + E+A+ RL+   + A+ AA EAV+          N  +EDD L    FV+LNIGD++P E ED + SLR RLEQ LPPDT +EQAEK                   +PP FDGDTAVAERPS    ARQ+      P+ P+E PK+ASAEDVERLNRMFGSMGGEPLR
Sbjct:    1 MAPMKLSISFIAVLIAVFDG---VDGFVGPVPVG--TRARVVRRAMATNGFHSTTRVQGRSLPRAQEPLRRQASMSAAPDKMPSPGISGEEGAPQKGG-----RLSRISGRVRKIIRRAVMGYLPEEEVSYKQRAEEQEAAAAKLRGEPEIADERLRDASIAAKAAAIEAVEESFVQGSFTGNEGEEDDWLANNDFVQLNIGDESPMEIEDKLASLRNRLEQGLPPDTAQEQAEKXXXXXXXXXXXXXX----XRPPSFDGDTAVAERPSSNLDARQANEGGMRPQAPKEAPKMASAEDVERLNRMFGSMGGEPLR 302
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1117.2446.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FM67_ECTSI1.880e-6149.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 211..231
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..291
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..18
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.719

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1117contigM-pyrifera_M_contig1117:11156..16706 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1117.2446.1mRNA_M-pyrifera_M_contig1117.2446.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig1117 11156..16706 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig1117.2446.1 ID=prot_M-pyrifera_M_contig1117.2446.1|Name=mRNA_M-pyrifera_M_contig1117.2446.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=292bp
MESPRVSLSFVAVLISVLAHPTCVDGFFVPAPACRPTAAALGSRAMGTSA
LSSRPEAAPRRMHEVWRRQASMSARQPGDGAPTGRSQEGGGGSTSRLSRI
SMRVRKMIRKAVMGYLPEEEMSYKQTTAKAAAEAAALRDQYEVANPRLQA
DGLKAQGAAAEAVDNFEDEDDILGEGFVRLNIGDQTPKEAEDAMMSLRKR
LEQQLPPDTDKEQAEKRRIAMQNQQNQQKAKEGPLKPPRFDGDTAVAERP
SPTDGARQSPEVPRETPKLASAEDVERLNRMFGSMGGEPLR*
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