prot_M-pyrifera_M_contig110813.2276.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig110813.2276.1
Unique Nameprot_M-pyrifera_M_contig110813.2276.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length197
Homology
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BLAST of mRNA_M-pyrifera_M_contig110813.2276.1 vs. uniprot
Match: A0A5C6BV68_9PLAN (Tetratricopeptide repeat protein n=5 Tax=Symmachiella TaxID=2795780 RepID=A0A5C6BV68_9PLAN)

HSP 1 Score: 248 bits (633), Expect = 2.620e-76
Identity = 119/194 (61.34%), Postives = 156/194 (80.41%), Query Frame = 0 
Query:    1 HALKWIPVIVILGLLFVSDFLDPPLTTAHTNELKRTYTRTLVGKPVLPPNEEETNWLYKQYQAAQHIAAAVPDDRRAQLHYAVMLANFGRNDEATDRLEEILQQSPDYRDAHITLGDIHTYRGNLDQASARYQSALSGARTGPERAAMNLRLGEIDLQRKDFTAAKNKFQKALQDDPALAESVETLETGRAASP 194
            HALKW P IV+LGLLF+SD +DPPLTTA  +++ ++Y +T+VGKP+     EE +WL +++Q+AQ IAA VPDDRRAQL  +++LANFGRN+EA +RLEE+L+Q PDY DAH  L +IH Y+GNL+QAS R+Q+ALS A+TG ER+A+NLRLGEIDL +KDF AAK +FQKA++DDP L+ SVE LE   + SP
Sbjct:  375 HALKWAPAIVVLGLLFLSDLIDPPLTTAQKDKMDKSYAQTVVGKPIRLEKPEEISWLNEKFQSAQDIAATVPDDRRAQLRASILLANFGRNNEAANRLEELLKQHPDYFDAHTILAEIHLYQGNLEQASDRFQTALSLAKTGKERSAINLRLGEIDLHKKDFAAAKIRFQKAVEDDPRLSASVEALEKASSPSP 568
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BLAST of mRNA_M-pyrifera_M_contig110813.2276.1 vs. uniprot
Match: UPI00029AAAF9 (hypothetical protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=UPI00029AAAF9)

HSP 1 Score: 189 bits (481), Expect = 5.970e-54
Identity = 92/186 (49.46%), Postives = 125/186 (67.20%), Query Frame = 0 
Query:    1 HALKWIPVIVILGLLFVSDFLDPPLTTAHTNELKRTYTRTLVGKPVLPPNEEETNWLYKQYQAAQHIAAAVPDDRRAQLHYAVMLANFGRNDEATDRLEEILQQSPDYRDAHITLGDIHTYRGNLDQASARYQSALSGARTGPERAAMNLRLGEIDLQRKDFTAAKNKFQKALQDDPALAESVETL 186
            H LKW P +V L LLF +D  D PLTT   + L + Y+R L G  +LP  ++E  WLY  ++  Q IAAA+PDDR+ QL  A+MLANFG ND+A  +LE++LQQ  D+ DA++TLG IH YRGN+DQA+   Q +LS ART  ERA+ N +LGE+ L + D   A ++F +AL D+P L  S++ L
Sbjct:  377 HLLKWAPALVGLALLFATDVSDSPLTTEQKDTLSQVYSRGLTGSSLLPRTDKEREWLYSHFKTTQSIAAAIPDDRKIQLRAAIMLANFGSNDDAVRKLEQLLQQHADFADAYLTLGSIHLYRGNMDQAAQYLQKSLSAARTEKERASANFKLGELALVQHDSAVADSRFAEALHDNPKLDVSIQKL 562
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BLAST of mRNA_M-pyrifera_M_contig110813.2276.1 vs. uniprot
Match: A0A3L7PAF9_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7PAF9_9BACT)

HSP 1 Score: 167 bits (424), Expect = 1.260e-45
Identity = 84/187 (44.92%), Postives = 123/187 (65.78%), Query Frame = 0 
Query:    1 HALKWIPVIVILGLLFVSDFLDPPLTTAHTNELKRTYTRTLVGKPVLPPNEEETNWLYKQYQAAQHIAAAVPDDRRAQLHYAVMLANFGRNDEATDRLEEILQQSPDYRDAHITLGDIHTYRGNLDQASARYQSALSGARTGPERAAMNLRLGEIDLQRKDFTAAKNKFQKALQDDPALAESVETLE 187
            H LKW P+I+++G LF+SD+    L  +   +L + Y  +L+GK  LPP EEE +W+Y Q++ AQ  AAAVP+D  AQ+  A+MLANFGRNDEA   LE++ Q+ P Y ++H++L +I  YRG LDQA+  +++AL       ERA +NL+LGE+ L++     A + FQ A+  +P L  +VE LE
Sbjct:  372 HLLKWSPLILLVGWLFLSDYSGTSLAQSRKKQLSQVYVESLMGKAALPPEEEEASWVYSQFEQAQATAAAVPNDPDAQVRAAIMLANFGRNDEAVAILEKVNQEYPSYFNSHVSLAEICLYRGQLDQAAPLFETALKLVVEPDERAIVNLKLGEVYLRQNHPEQAHSHFQAAIAGNPKLKAAVEKLE 558
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110813.2276.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A5C6BV68_9PLAN2.620e-7661.34Tetratricopeptide repeat protein n=5 Tax=Symmachie... [more]
UPI00029AAAF95.970e-5449.46hypothetical protein n=1 Tax=Schlesneria paludicol... [more]
A0A3L7PAF9_9BACT1.260e-4544.92Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 57..192
e-value: 7.9E-17
score: 63.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 69..183
NoneNo IPR availablePFAMPF14561TPR_20coord: 61..137
e-value: 2.6E-6
score: 27.7
NoneNo IPR availablePANTHERPTHR44314FAMILY NOT NAMEDcoord: 77..177
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..196
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..28
score: 0.622
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 109..142
score: 6.49
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 75..108
score: 6.313
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 146..179
score: 8.821
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 75..179
score: 16.907

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110813contigM-pyrifera_M_contig110813:5..595 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110813.2276.1mRNA_M-pyrifera_M_contig110813.2276.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig110813 5..595 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig110813.2276.1 ID=prot_M-pyrifera_M_contig110813.2276.1|Name=mRNA_M-pyrifera_M_contig110813.2276.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=197bp
HALKWIPVIVILGLLFVSDFLDPPLTTAHTNELKRTYTRTLVGKPVLPPN
EEETNWLYKQYQAAQHIAAAVPDDRRAQLHYAVMLANFGRNDEATDRLEE
ILQQSPDYRDAHITLGDIHTYRGNLDQASARYQSALSGARTGPERAAMNL
RLGEIDLQRKDFTAAKNKFQKALQDDPALAESVETLETGRAASPGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR019734TPR_repeat
IPR013026TPR-contain_dom