prot_M-pyrifera_M_contig109623.2016.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig109623.2016.1
Unique Nameprot_M-pyrifera_M_contig109623.2016.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length200
Homology
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BLAST of mRNA_M-pyrifera_M_contig109623.2016.1 vs. uniprot
Match: A0A8J6CFR3_DIALT (MFS domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CFR3_DIALT)

HSP 1 Score: 81.3 bits (199), Expect = 1.760e-14
Identity = 59/191 (30.89%), Postives = 96/191 (50.26%), Query Frame = 0 
Query:    3 PFNFVRLFTKSPRLAKLNLLVALQALPANMGDVAQMFAKTKRGWGPQEVGKFQAALGLAAIMSGGLTGKLIQQFGKREYSTLSNLAAIVSYYVFGIADTSAKAYLGCGLSAFAQMRSAALGAMILRTGAAEGSGFGKMAADRANLTAVVKVVGPLLSSSLYSTGAKRGNEGLPYFFMVGLLVICQGLMFSI 193
            P    RLF  S RLA L+ L+ALQ LP    DV Q+ A      G  E  +    +G +++ + GL   LI++ G R+++ L+ ++  +  Y  G++ +   A L    +     RS  +  ++   G   G   G++A DRANL A+VKVVGP++ + LY+ G   G   LP+     L++    L + +
Sbjct:  246 PIACTRLFGASRRLALLSALLALQVLPFFTTDVLQVHALEAWRMGNAERTRLFTFVGASSVGANGLASALIRRLGLRDFTALAGVSHAL--YWAGVSHSGGAALLLALPTMLGGARSLGVSTLVTAEGTRAGLRQGQLAGDRANLFALVKVVGPIVYAQLYARGKAIGLPQLPFVLNAVLMLAAAMLSYRL 434
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109623.2016.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A8J6CFR3_DIALT1.760e-1430.89MFS domain-containing protein n=1 Tax=Diacronema l... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1250.20coord: 16..197
e-value: 2.7E-9
score: 38.7
NoneNo IPR availablePANTHERPTHR23507FAMILY NOT NAMEDcoord: 5..196
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 147..164
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 176..193
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..99
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 165..175
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 52..69
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 100..104
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 128..146
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..40
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 41..51
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 105..127
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 194..199
IPR036259MFS transporter superfamilySUPERFAMILY103473MFS general substrate transportercoord: 3..193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig109623contigM-pyrifera_M_contig109623:2..601 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig109623.2016.1mRNA_M-pyrifera_M_contig109623.2016.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig109623 2..601 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig109623.2016.1 ID=prot_M-pyrifera_M_contig109623.2016.1|Name=mRNA_M-pyrifera_M_contig109623.2016.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=200bp
VNPFNFVRLFTKSPRLAKLNLLVALQALPANMGDVAQMFAKTKRGWGPQE
VGKFQAALGLAAIMSGGLTGKLIQQFGKREYSTLSNLAAIVSYYVFGIAD
TSAKAYLGCGLSAFAQMRSAALGAMILRTGAAEGSGFGKMAADRANLTAV
VKVVGPLLSSSLYSTGAKRGNEGLPYFFMVGLLVICQGLMFSIPQKEWV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf