prot_M-pyrifera_M_contig10960.2015.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig10960.2015.1
Unique Nameprot_M-pyrifera_M_contig10960.2015.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length672
Homology
BLAST of mRNA_M-pyrifera_M_contig10960.2015.1 vs. uniprot
Match: D8LHA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA8_ECTSI)

HSP 1 Score: 274 bits (701), Expect = 3.100e-75
Identity = 322/709 (45.42%), Postives = 354/709 (49.93%), Query Frame = 0
Query:    1 MDAGRAAAGLPVADWSESHMVNVRLVVDVLIALGLVKSDYNTVEQAGGWPMDVHPPSEAHAGAPAPCFCSSVMRRAVARHTKMVAPSMPATLPTLPASFPMDPFQLGIPWNPGS-----------------PSNAGVVSSARAPVGNAAVYGVPGQVVGPTA----AAAAXXXXXPGAGGADGTAGSTLFPKTEIEIEGGG----------AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPAATSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSTVGWRQSQPAPASXXXXXXXXXXFPSTPAAPGLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGRWGVGSADGLPEAFPLAGMTFEGVFSPSQERHKLAPLYNNSNXXXXXXXXXXXXXXXXXXXXXXXXATLDVLDTPIPTPPLVSPAGGAGSREXXXXXXXXXXXXXVVTDAMATVTAAV--PGFLVGEPGLAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----KGAGASHHSGAGSAGDALDVVAMGEDLSDEAKALAEEGLLDLVRDAWGEETTDRAHAYLEQDALPYLPIDGRAFALAVEGRLEPGGELETNYGKAAVEV 672
            MDAGRAAAGLPVA+WSESHMVNVRLVVDVLIALGLVKSDYNTVEQ+ GWPMDVHPPSE+H GAPAPCFCSSVMRRA+ARHTKM  P++PA LP+L ASFP+DPFQLGIPWNPGS                                 AAVYGVPGQV  P+     AAA       G GGA       L PK EIE  GG           A                                           ++                        XXXXXX                                                   ++V W  S  A   XXXXXXXXXX  + P AP                                           R    + +GLP+   L G+TFEGVFSPSQER KLAPL N S    XXXXXXXXXXXXXXXXXXXXX               +S   G+                  V DA + V A    PG            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         XXX        +G GAS      S G  LDVVA+GE LSDEAKALAEEGL DLVRDAWG E ++RAH Y+E++A+P LP+DGRAFALAVEGRLEPGGE+ET YGKAAVE+
Sbjct:  346 MDAGRAAAGLPVANWSESHMVNVRLVVDVLIALGLVKSDYNTVEQSAGWPMDVHPPSESHGGAPAPCFCSSVMRRAMARHTKMATPAVPAALPSLTASFPIDPFQLGIPWNPGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVYGVPGQVGAPSTVVARAAAMQGGRLTGGGGA-------LSPKREIEAGGGAGLPGRLLVEPAAPVAAAAAAYSAAAWCGHGSTADRPGYSRRAGGLSGAVFGAGSSSAKEGPSVSWQQQQRTGRGETVAAVXXXXXXEALPSMLSPASSSLAIEGTIPGNHGSTTGGTDSSGGDGPRQAVLSGPSPATTSVAWHPS--AGVXXXXXXXXXXXHGTIPRAPPPTPLLSTTTPPRTTNTAVSVGGVGVGSGPATVAVSAGWEARSR----AVEGLPDPLSLTGLTFEGVFSPSQERQKLAPLLNMSGGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN---LSAIAGSNDTTAAAAAGNSTAMELGVVDAGSGVNAFARSPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSGLGVAASXXXNAAMVVAARGTGASV-----SPGVPLDVVALGEHLSDEAKALAEEGLFDLVRDAWGSEASERAHCYVEEEAVPSLPVDGRAFALAVEGRLEPGGEVETTYGKAAVEM 1033          
BLAST of mRNA_M-pyrifera_M_contig10960.2015.1 vs. uniprot
Match: A0A6H5KYA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYA3_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 2.080e-53
Identity = 99/114 (86.84%), Postives = 108/114 (94.74%), Query Frame = 0
Query:    1 MDAGRAAAGLPVADWSESHMVNVRLVVDVLIALGLVKSDYNTVEQAGGWPMDVHPPSEAHAGAPAPCFCSSVMRRAVARHTKMVAPSMPATLPTLPASFPMDPFQLGIPWNPGS 114
            MDAGRAAAGLPVA+WSESHMVNVRLVVDVLIALGLVKSDYNTVEQ+ GWPMDVHPPSE+H GAPAPCFCSSVMRRA+ARHTKM  P++PA LP+L ASFP+DPFQLGIPWNPG+
Sbjct:  502 MDAGRAAAGLPVANWSESHMVNVRLVVDVLIALGLVKSDYNTVEQSAGWPMDVHPPSESHGGAPAPCFCSSVMRRAMARHTKMATPAVPAVLPSLTASFPIDPFQLGIPWNPGA 615          
BLAST of mRNA_M-pyrifera_M_contig10960.2015.1 vs. uniprot
Match: A0A6H5LFU5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LFU5_9PHAE)

HSP 1 Score: 132 bits (332), Expect = 4.750e-28
Identity = 66/87 (75.86%), Postives = 75/87 (86.21%), Query Frame = 0
Query:  586 SAGDALDVVAMGEDLSDEAKALAEEGLLDLVRDAWGEETTDRAHAYLEQDALPYLPIDGRAFALAVEGRLEPGGELETNYGKAAVEV 672
            S G  LDVVA+GE LSDEAKALAEEGL DLVRDAWG E + RAH+Y+E++  P LP+DGRAFALAVEGRLEPGGE+ET YGKAAVE+
Sbjct:  971 SPGAPLDVVALGEHLSDEAKALAEEGLFDLVRDAWGGEASARAHSYVEEEVAPSLPVDGRAFALAVEGRLEPGGEVETTYGKAAVEM 1057          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10960.2015.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LHA8_ECTSI3.100e-7545.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KYA3_9PHAE2.080e-5386.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LFU5_9PHAE4.750e-2875.86Reverse transcriptase domain-containing protein n=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10960contigM-pyrifera_M_contig10960:1127..9356 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10960.2015.1mRNA_M-pyrifera_M_contig10960.2015.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig10960 1127..9374 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig10960.2015.1 ID=prot_M-pyrifera_M_contig10960.2015.1|Name=mRNA_M-pyrifera_M_contig10960.2015.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=672bp
MDAGRAAAGLPVADWSESHMVNVRLVVDVLIALGLVKSDYNTVEQAGGWP
MDVHPPSEAHAGAPAPCFCSSVMRRAVARHTKMVAPSMPATLPTLPASFP
MDPFQLGIPWNPGSPSNAGVVSSARAPVGNAAVYGVPGQVVGPTAAAAAV
AAVVPGAGGADGTAGSTLFPKTEIEIEGGGAGGTAAARAAAAAATAAAAA
AAAAAPGAGTAAPASAPAAAPATPAATSTTTAGSAAAATAATAAAAAAAT
TTTAATTTTAAAAATDSAAALDQIMAAASSALRREGEGTAGPQRENGGGG
GGGGGGVSTVGWRQSQPAPASSSPIPPSSLLFPSTPAAPGLASAPPLLVV
STPPRQIHSAAFSSGESGGGGTGGGEAVVGGGRWGVGSADGLPEAFPLAG
MTFEGVFSPSQERHKLAPLYNNSNSSSAAATTAATIATTATTTTTTTNAT
LDVLDTPIPTPPLVSPAGGAGSREGAGAREGAGARAGVVTDAMATVTAAV
PGFLVGEPGLAAAGAGGGDGGGAAGDVAGAGAVQAGGSVGGGGGGGGDCD
GGGGGINAVAAAAAASAAMMVAAKGAGASHHSGAGSAGDALDVVAMGEDL
SDEAKALAEEGLLDLVRDAWGEETTDRAHAYLEQDALPYLPIDGRAFALA
VEGRLEPGGELETNYGKAAVEV
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