prot_M-pyrifera_M_contig109542.2004.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig109542.2004.1
Unique Nameprot_M-pyrifera_M_contig109542.2004.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length190
Homology
BLAST of mRNA_M-pyrifera_M_contig109542.2004.1 vs. uniprot
Match: UPI000E6D79BF (exosome complex exonuclease RRP44-like n=1 Tax=Hyposmocoma kahamanoa TaxID=1477025 RepID=UPI000E6D79BF)

HSP 1 Score: 214 bits (545), Expect = 9.160e-65
Identity = 105/190 (55.26%), Postives = 130/190 (68.42%), Query Frame = 0
Query:    1 VFVPVDSRFPRVLLETRQKRSLVGQRLVVVPDRWSCRDAYPRGHYVRTIGPVGDRGVETEVVLLEHDIPTREFSPAVMACLPPPDWQIPASEEARREDLRSIPVCSIDPPGCRDIDDALHAFPLRSHPLCRVEQADGSVKMLPKIECGVHIADVTYFVRPDSPLDLEAQARGNTTYLVDKRLDMLPKLLT 190
            +FVP + R PRV +ETRQ   L  QR++V  D W     YP GH+VR +GP+GD+  E EV+LLEHD+P   FS AV+ACLPP DW IP  E  +R DLRS+ VCS+DPPGC DIDDALHA P+          A  + + L K E GVHIADVT+FVRP++ LD EA  R  T YLVDKR+DM+P+LL+
Sbjct:  212 LFVPAEKRIPRVRIETRQSDKLATQRILVALDSWPRNSRYPLGHFVRALGPIGDKDAENEVILLEHDVPHARFSEAVLACLPPDDWTIPEEEVKKRVDLRSLCVCSVDPPGCTDIDDALHARPI----------AGTTPEGLNKFEVGVHIADVTHFVRPNTALDKEAANRSTTVYLVDKRIDMVPELLS 391          
BLAST of mRNA_M-pyrifera_M_contig109542.2004.1 vs. uniprot
Match: UPI00067B8850 (exosome complex exonuclease RRP44 isoform X1 n=1 Tax=Amyelois transitella TaxID=680683 RepID=UPI00067B8850)

HSP 1 Score: 219 bits (558), Expect = 4.740e-63
Identity = 106/190 (55.79%), Postives = 131/190 (68.95%), Query Frame = 0
Query:    1 VFVPVDSRFPRVLLETRQKRSLVGQRLVVVPDRWSCRDAYPRGHYVRTIGPVGDRGVETEVVLLEHDIPTREFSPAVMACLPPPDWQIPASEEARREDLRSIPVCSIDPPGCRDIDDALHAFPLRSHPLCRVEQADGSVKMLPKIECGVHIADVTYFVRPDSPLDLEAQARGNTTYLVDKRLDMLPKLLT 190
            +F P + R PRV +E+RQ   L  QR++V  D W     YP GH+VR +GP+GD+  E EV+LLEHD+P   FS AV+ACLPP DW IP  E  +R DLRSIP+CS+DPPGC DIDDALHA PL          +DG    L + E GVHIADVTYFVRPD+ LD EA +R  T YLVD+R+DM+P+LL+
Sbjct:  369 LFTPAEKRIPRVRIESRQSEILASQRILVALDSWPRNSRYPLGHFVRALGPIGDKDAENEVILLEHDVPHARFSEAVLACLPPDDWTIPPEEIKKRVDLRSIPICSVDPPGCTDIDDALHARPLPG------TTSDG----LKRYEVGVHIADVTYFVRPDTALDKEAASRSTTVYLVDRRIDMVPELLS 548          
BLAST of mRNA_M-pyrifera_M_contig109542.2004.1 vs. uniprot
Match: A0A5A8CA55_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CA55_CAFRO)

HSP 1 Score: 219 bits (559), Expect = 7.350e-63
Identity = 116/191 (60.73%), Postives = 134/191 (70.16%), Query Frame = 0
Query:    2 FVPVDSRFPRVLLETRQKRSLVGQRLVVVPDRWSCRDAYPRGHYVRTIGPVGDRGVETEVVLLEHDIPTREFSPAVMACLPPPDWQI-PASEEAR-REDLRSIPVCSIDPPGCRDIDDALHAFPLRSHPLCRVEQADGSVKMLPKIECGVHIADVTYFVRPDSPLDLEAQARGNTTYLVDKRLDMLPKLLT 190
            FVP+D R+PRV LETRQ  +L GQR+VV  D W      P GHYVRT+GPVGDR  ETE +L EH IPTR FS AVMACLPP +W + PA+  A  R D+R I VCSIDPPGC+DIDDALH  PL           D S  +    E GVHIADVT+FVRPD+P+D EA +R NTTYLV++RLDMLP LLT
Sbjct:  498 FVPIDGRWPRVRLETRQAEALAGQRIVVALDAWPASSRQPFGHYVRTLGPVGDRAAETEALLEEHSIPTRAFSSAVMACLPPSNWVVTPATASANGRRDIRHICVCSIDPPGCKDIDDALHFRPL-----------DDSGTLF---EAGVHIADVTHFVRPDTPIDEEAASRANTTYLVERRLDMLPGLLT 674          
BLAST of mRNA_M-pyrifera_M_contig109542.2004.1 vs. uniprot
Match: A0A5E4QYI8_9NEOP (Uncharacterized protein (Fragment) n=1 Tax=Leptidea sinapis TaxID=189913 RepID=A0A5E4QYI8_9NEOP)

HSP 1 Score: 213 bits (541), Expect = 7.450e-63
Identity = 104/190 (54.74%), Postives = 128/190 (67.37%), Query Frame = 0
Query:    1 VFVPVDSRFPRVLLETRQKRSLVGQRLVVVPDRWSCRDAYPRGHYVRTIGPVGDRGVETEVVLLEHDIPTREFSPAVMACLPPPDWQIPASEEARREDLRSIPVCSIDPPGCRDIDDALHAFPLRSHPLCRVEQADGSVKMLPKIECGVHIADVTYFVRPDSPLDLEAQARGNTTYLVDKRLDMLPKLLT 190
            +F P + R PRV +ETRQ   L  QR++V  D W     YP GH+VR +GP+GD+  E EV+LLEHD+P   FS AV++CLPP DW IP  E  +R DLR + VCS+DPPGC DIDDALHA PL          AD S + L K E GVHIADVT+FVRP++ LD EA +R  T YLV KR+DM+P LL+
Sbjct:  352 LFTPAEKRIPRVRIETRQSELLAAQRILVALDSWPRNSRYPLGHFVRALGPIGDKDAENEVILLEHDVPHARFSEAVLSCLPPDDWTIPEEEIKKRVDLRGVCVCSVDPPGCTDIDDALHARPL----------ADKSSEGLNKYEVGVHIADVTHFVRPNTALDQEAASRSTTVYLVGKRIDMVPDLLS 531          
BLAST of mRNA_M-pyrifera_M_contig109542.2004.1 vs. uniprot
Match: UPI0018D0AFB0 (exosome complex exonuclease RRP44 isoform X1 n=2 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018D0AFB0)

HSP 1 Score: 218 bits (554), Expect = 1.710e-62
Identity = 106/190 (55.79%), Postives = 132/190 (69.47%), Query Frame = 0
Query:    1 VFVPVDSRFPRVLLETRQKRSLVGQRLVVVPDRWSCRDAYPRGHYVRTIGPVGDRGVETEVVLLEHDIPTREFSPAVMACLPPPDWQIPASEEARREDLRSIPVCSIDPPGCRDIDDALHAFPLRSHPLCRVEQADGSVKMLPKIECGVHIADVTYFVRPDSPLDLEAQARGNTTYLVDKRLDMLPKLLT 190
            +F P + R PRV +ETRQ  +L  QR++V  D W     YPRGH+VR +GP+GD+  E EV+LLEHD+P   FS AV+ACLPP DW IP  E A+R+DLR + +CS+DPPGC DIDDALHA       +  V  ADG    L + E GVHIADVT+FVRP S LD EA AR  T YLVD+R+DM+P+LL+
Sbjct:  369 LFTPAEKRIPRVRIETRQSEALSSQRILVALDSWPRNSRYPRGHFVRALGPIGDKNAENEVLLLEHDVPHARFSEAVLACLPPDDWTIPEEEIAKRQDLRPLCICSVDPPGCTDIDDALHAR------VIPVSSADG----LKRYEVGVHIADVTHFVRPGSALDREAAARATTVYLVDRRIDMVPELLS 548          
BLAST of mRNA_M-pyrifera_M_contig109542.2004.1 vs. uniprot
Match: A0A812WL80_9DINO (Dis3 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812WL80_9DINO)

HSP 1 Score: 217 bits (552), Expect = 4.490e-62
Identity = 107/190 (56.32%), Postives = 132/190 (69.47%), Query Frame = 0
Query:    1 VFVPVDSRFPRVLLETRQKRSLVGQRLVVVPDRWSCRDAYPRGHYVRTIGPVGDRGVETEVVLLEHDIPTREFSPAVMACLPPPDWQIPASEEARREDLRSIPVCSIDPPGCRDIDDALHAFPLRSHPLCRVEQADGSVKMLPKIECGVHIADVTYFVRPDSPLDLEAQARGNTTYLVDKRLDMLPKLLT 190
            + VPVD+R PR+ + TRQK  L+ +R++V  D W     YP GHYVRT+G +GD+ VET+V+LLEHDIPTR FS AVMACLPP DW + A     R DLR + V S+DPPGC+DIDDALHA PL +                   E GVHIADVT+FV+  +P+DLEA +RGNTTYLV++RLDMLP LLT
Sbjct:  385 IVVPVDTRIPRIRIATRQKEDLLDKRILVAIDGWERTSPYPHGHYVRTLGQIGDKEVETQVLLLEHDIPTRAFSKAVMACLPPADWVVTAENSEGRRDLRDLNVVSVDPPGCKDIDDALHARPLPNG----------------NWELGVHIADVTHFVKAGTPIDLEAASRGNTTYLVERRLDMLPGLLT 558          
BLAST of mRNA_M-pyrifera_M_contig109542.2004.1 vs. uniprot
Match: UPI00189068D9 (uncharacterized protein LOC119189957 n=1 Tax=Manduca sexta TaxID=7130 RepID=UPI00189068D9)

HSP 1 Score: 216 bits (549), Expect = 1.980e-61
Identity = 106/190 (55.79%), Postives = 129/190 (67.89%), Query Frame = 0
Query:    1 VFVPVDSRFPRVLLETRQKRSLVGQRLVVVPDRWSCRDAYPRGHYVRTIGPVGDRGVETEVVLLEHDIPTREFSPAVMACLPPPDWQIPASEEARREDLRSIPVCSIDPPGCRDIDDALHAFPLRSHPLCRVEQADGSVKMLPKIECGVHIADVTYFVRPDSPLDLEAQARGNTTYLVDKRLDMLPKLLT 190
            +F P + R PRV +ETRQ  +L  QR++V  D W     YP GH+VR +GP+GD+  E EV+LLEHD+P   FS AV++CLPP +W IP  E  +R DLRSI VCS+DPPGC DIDDALHA  L           DG    L + E GVHIADVTYFVRPD+PLD EA AR  T YLVD+R+DM+P LL+
Sbjct:  368 LFTPAEKRIPRVRIETRQSDALAAQRILVALDSWPRNSRYPLGHFVRALGPIGDKNAENEVILLEHDVPHARFSEAVLSCLPPDNWTIPEEEIKKRVDLRSIVVCSVDPPGCTDIDDALHARALAG------ATRDG----LKRFEVGVHIADVTYFVRPDTPLDKEAAARSTTVYLVDRRIDMVPDLLS 547          
BLAST of mRNA_M-pyrifera_M_contig109542.2004.1 vs. uniprot
Match: A0A437B0A2_CHISP (Uncharacterized protein n=1 Tax=Chilo suppressalis TaxID=168631 RepID=A0A437B0A2_CHISP)

HSP 1 Score: 214 bits (545), Expect = 3.070e-61
Identity = 106/190 (55.79%), Postives = 129/190 (67.89%), Query Frame = 0
Query:    1 VFVPVDSRFPRVLLETRQKRSLVGQRLVVVPDRWSCRDAYPRGHYVRTIGPVGDRGVETEVVLLEHDIPTREFSPAVMACLPPPDWQIPASEEARREDLRSIPVCSIDPPGCRDIDDALHAFPLRSHPLCRVEQADGSVKMLPKIECGVHIADVTYFVRPDSPLDLEAQARGNTTYLVDKRLDMLPKLLT 190
            +F P + R PRV +ETRQ   L  QR++V  D W     YP GH+VR +GP+GD+  E EV+LLEHD+P   FS AV+ACLPP DW IP  E  +R DLRSI +CS+DPPGC DIDDALHA P+          ADG    L K E GVHIADVTYFVRP++ LD EA +R  T YLVD+R+DM+P LL+
Sbjct:  369 LFTPAEKRIPRVRIETRQSDVLASQRILVALDSWPRNSRYPLGHFVRALGPIGDKDAENEVILLEHDVPHARFSEAVLACLPPNDWTIPEEEIKKRVDLRSICICSVDPPGCTDIDDALHARPIDG------VTADG----LKKYEVGVHIADVTYFVRPNTALDKEAASRSTTVYLVDRRIDMVPDLLS 548          
BLAST of mRNA_M-pyrifera_M_contig109542.2004.1 vs. uniprot
Match: UPI00188DD78C (exosome complex exonuclease RRP44 n=1 Tax=Manduca sexta TaxID=7130 RepID=UPI00188DD78C)

HSP 1 Score: 213 bits (543), Expect = 5.850e-61
Identity = 104/190 (54.74%), Postives = 128/190 (67.37%), Query Frame = 0
Query:    1 VFVPVDSRFPRVLLETRQKRSLVGQRLVVVPDRWSCRDAYPRGHYVRTIGPVGDRGVETEVVLLEHDIPTREFSPAVMACLPPPDWQIPASEEARREDLRSIPVCSIDPPGCRDIDDALHAFPLRSHPLCRVEQADGSVKMLPKIECGVHIADVTYFVRPDSPLDLEAQARGNTTYLVDKRLDMLPKLLT 190
            +F P + R PRV +ETRQ  +L  QR++V  D W     YP GH+VR +GP+GD+  E EV+LLEHD+P   FS AV++CLPP +W IP  E  +R DLRS  VCS+DPPGC DIDDALHA  L          A  +   L + E GVHIADVTYFVRPD+PLD EA AR  T YLVD+R+DM+P LL+
Sbjct:  368 LFTPAEKRIPRVRIETRQSDALAAQRILVALDSWPRNSRYPLGHFVRALGPIGDKNAENEVILLEHDVPHARFSEAVLSCLPPDNWTIPEEEIKKRVDLRSTCVCSVDPPGCTDIDDALHARAL----------AGATRAGLKRFEVGVHIADVTYFVRPDTPLDKEAAARSTTVYLVDRRIDMVPDLLS 547          
BLAST of mRNA_M-pyrifera_M_contig109542.2004.1 vs. uniprot
Match: UPI0010387BDD (exosome complex exonuclease RRP44 isoform X1 n=1 Tax=Ostrinia furnacalis TaxID=93504 RepID=UPI0010387BDD)

HSP 1 Score: 213 bits (543), Expect = 5.880e-61
Identity = 105/190 (55.26%), Postives = 129/190 (67.89%), Query Frame = 0
Query:    1 VFVPVDSRFPRVLLETRQKRSLVGQRLVVVPDRWSCRDAYPRGHYVRTIGPVGDRGVETEVVLLEHDIPTREFSPAVMACLPPPDWQIPASEEARREDLRSIPVCSIDPPGCRDIDDALHAFPLRSHPLCRVEQADGSVKMLPKIECGVHIADVTYFVRPDSPLDLEAQARGNTTYLVDKRLDMLPKLLT 190
            +F P + R PRV +ETRQ   L  QR++V  D W     YP GH+VR +GP+GD+  E EV+LLEHD+P   FS AV+ CLPP DW IP  E  +R DLRSI +CS+DPPGC DIDDALHA P+        + ADG    L K E GVHIADVTYFVRP++ LD EA +R  T YLVD+R+DM+P LL+
Sbjct:  369 LFTPAEKRIPRVRIETRQSDILASQRILVALDSWPRNSRYPLGHFVRALGPIGDKDAENEVILLEHDVPHARFSEAVLNCLPPNDWTIPEEEIKKRVDLRSICICSVDPPGCTDIDDALHARPVAG------KTADG----LSKYEVGVHIADVTYFVRPETALDKEAASRSTTVYLVDRRIDMVPDLLS 548          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109542.2004.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000E6D79BF9.160e-6555.26exosome complex exonuclease RRP44-like n=1 Tax=Hyp... [more]
UPI00067B88504.740e-6355.79exosome complex exonuclease RRP44 isoform X1 n=1 T... [more]
A0A5A8CA55_CAFRO7.350e-6360.73Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A5E4QYI8_9NEOP7.450e-6354.74Uncharacterized protein (Fragment) n=1 Tax=Leptide... [more]
UPI0018D0AFB01.710e-6255.79exosome complex exonuclease RRP44 isoform X1 n=2 T... [more]
A0A812WL80_9DINO4.490e-6256.32Dis3 protein (Fragment) n=1 Tax=Symbiodinium sp. K... [more]
UPI00189068D91.980e-6155.79uncharacterized protein LOC119189957 n=1 Tax=Mandu... [more]
A0A437B0A2_CHISP3.070e-6155.79Uncharacterized protein n=1 Tax=Chilo suppressalis... [more]
UPI00188DD78C5.850e-6154.74exosome complex exonuclease RRP44 n=1 Tax=Manduca ... [more]
UPI0010387BDD5.880e-6155.26exosome complex exonuclease RRP44 isoform X1 n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.700coord: 1..53
e-value: 6.8E-17
score: 62.9
NoneNo IPR availablePANTHERPTHR23355:SF35EXOSOME COMPLEX EXONUCLEASE RRP44coord: 2..190
NoneNo IPR availablePANTHERPTHR23355RIBONUCLEASEcoord: 2..190
IPR001900Ribonuclease II/RPFAMPF00773RNBcoord: 96..189
e-value: 7.9E-24
score: 84.6
IPR041505Dis3-like cold-shock domain 2PFAMPF17849OB_Dis3coord: 2..67
e-value: 1.7E-15
score: 56.8
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 23..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig109542contigM-pyrifera_M_contig109542:28..597 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig109542.2004.1mRNA_M-pyrifera_M_contig109542.2004.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig109542 28..597 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig109542.2004.1 ID=prot_M-pyrifera_M_contig109542.2004.1|Name=mRNA_M-pyrifera_M_contig109542.2004.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=190bp
VFVPVDSRFPRVLLETRQKRSLVGQRLVVVPDRWSCRDAYPRGHYVRTIG
PVGDRGVETEVVLLEHDIPTREFSPAVMACLPPPDWQIPASEEARREDLR
SIPVCSIDPPGCRDIDDALHAFPLRSHPLCRVEQADGSVKMLPKIECGVH
IADVTYFVRPDSPLDLEAQARGNTTYLVDKRLDMLPKLLT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001900RNase_II/R
IPR041505Dis3_CSD2
IPR012340NA-bd_OB-fold