prot_M-pyrifera_M_contig108824.1849.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig108824.1849.1
Unique Nameprot_M-pyrifera_M_contig108824.1849.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length77
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108824.1849.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019956UbiquitinPRINTSPR00348UBIQUITINcoord: 27..47
score: 41.4
coord: 6..26
score: 24.99
coord: 48..69
score: 38.88
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 4..65
e-value: 3.1E-9
score: 36.4
IPR000626Ubiquitin domainPROSITEPS50053UBIQUITIN_2coord: 1..71
score: 11.878
NoneNo IPR availableGENE3D3.10.20.90coord: 1..71
e-value: 4.7E-12
score: 47.6
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 1..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig108824contigM-pyrifera_M_contig108824:112..342 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig108824.1849.1mRNA_M-pyrifera_M_contig108824.1849.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig108824 112..342 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig108824.1849.1 ID=prot_M-pyrifera_M_contig108824.1849.1|Name=mRNA_M-pyrifera_M_contig108824.1849.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=77bp
KLPTGRTVEVVVGCSAPIEGLKWRMEALYGYPRAHQLIQFAGKQLSNGTC
MQDYNLHKDAVAHLVDRSGTGPKAPP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019956Ubiquitin
IPR000626Ubiquitin_dom
IPR029071Ubiquitin-like_domsf