prot_M-pyrifera_M_contig108067.1720.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig108067.1720.1
Unique Nameprot_M-pyrifera_M_contig108067.1720.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length103
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig108067.1720.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.200coord: 1..103
e-value: 1.2E-9
score: 40.2
NoneNo IPR availablePFAMPF13385Laminin_G_3coord: 7..95
e-value: 2.2E-9
score: 37.7
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..103
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 6..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig108067contigM-pyrifera_M_contig108067:306..614 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig108067.1720.1mRNA_M-pyrifera_M_contig108067.1720.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig108067 306..614 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig108067.1720.1 ID=prot_M-pyrifera_M_contig108067.1720.1|Name=mRNA_M-pyrifera_M_contig108067.1720.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=103bp
TDDTKWWAYTSYGLVPGAWTHFALVIDCARPRAQIFLNGTAVLNVATRIP
LLVDRPHTLVGRATNGFQAIRPKPWRGVVDRVTLWSMPLNQAQVQILAAG
GDP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013320ConA-like_dom_sf