prot_M-pyrifera_M_contig1075.1597.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig1075.1597.1
Unique Nameprot_M-pyrifera_M_contig1075.1597.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length294
Homology
BLAST of mRNA_M-pyrifera_M_contig1075.1597.1 vs. uniprot
Match: D8LU34_ECTSI (U-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU34_ECTSI)

HSP 1 Score: 486 bits (1251), Expect = 8.480e-163
Identity = 248/276 (89.86%), Postives = 263/276 (95.29%), Query Frame = 0
Query:    1 MNESNSLVAAVMEKLPEVRAVQLQMRDPAQWGAMTETQRNEVSERHSENERSLKSNLSLCNETLHMVTYLTSDPDIQKPFLREELLLRLAEMLLCVLKQLVGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQDDLLPKATSTMRRLQLLPAAAMADMDRLCSAVVEARVVYETSEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTVMDRQGSTIVQHLLNDSNDPFNRQPLTEAMVQPQQELRQRIEDFVARRVDQA 276
            MNESNSLVA+VMEKLPEVRAVQLQMRDPAQWGAMTETQRNE++ERH ENERSLKSNLSLCNETLHMV YLTSDPDIQKPFLREELLLRLAEMLLCVLKQL+GSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQ+DLLPKATSTMRRLQLLPA++MADMD LCSAV+EAR  YE SEASLGEVPDEFLDPVLCHVMRDPVLLPTSGT++DR  STIVQHLLNDS DPFNRQPLTE MV+PQ ELR+RIE+F+ARR  Q+
Sbjct:  686 MNESNSLVASVMEKLPEVRAVQLQMRDPAQWGAMTETQRNEIAERHDENERSLKSNLSLCNETLHMVAYLTSDPDIQKPFLREELLLRLAEMLLCVLKQLIGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQEDLLPKATSTMRRLQLLPASSMADMDSLCSAVIEARASYEASEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTILDR--STIVQHLLNDSMDPFNRQPLTEDMVEPQTELRERIEEFLARRGSQS 959          
BLAST of mRNA_M-pyrifera_M_contig1075.1597.1 vs. uniprot
Match: A0A835Z369_9STRA (Ubiquitin elongating factor core-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z369_9STRA)

HSP 1 Score: 291 bits (746), Expect = 8.080e-89
Identity = 153/272 (56.25%), Postives = 201/272 (73.90%), Query Frame = 0
Query:    1 MNESNSLVAAVMEKLPEVRAVQLQMRDPAQWGAMTETQRNEVSERHSENERSLKSNLSLCNETLHMVTYLTSDPDIQKPFLREELLLRLAEMLLCVLKQLVGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPG-FHKHLAMSGYYQDDLLPKATSTMRRLQLLPAAAMADMDRLCSAVVEARVVYETSEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTVMDRQGSTIVQHLLNDSNDPFNRQPLTEAMVQPQQELRQRIEDFVAR 271
            MNE+NSLV  VMEKL E+R +Q+Q RD A WGA+ E +RNE+ ER +  ER +K+NL LCNETL+MV+YLTSD  I+KPFL  ELL RLA MLL VL QLVG KGLEIKVDNPESYNFRPK+ML  +   ++ F+     F + +A  G+YQ  LLPKA +T+R+L LL   ++A +D+LC +V  A       +  LG+VP+EFLDP++C +M+DPV LPTSG ++DR  +TI+QHLLND  DPFNR+PL+  M+QPQ EL+ RI+ ++A+
Sbjct:  594 MNETNSLVTNVMEKLLEIRTIQVQQRDGATWGALPEERRNEIEERLTAAERDVKANLGLCNETLNMVSYLTSDAQIRKPFLLPELLGRLASMLLSVLGQLVGKKGLEIKVDNPESYNFRPKDMLASVMAVVAHFADAGADFDRAVATCGFYQAQLLPKAAATVRKLGLLDMVSLAAVDKLCGSVAAAAADANAMDEELGDVPEEFLDPLMCTIMQDPVGLPTSGQIVDR--ATIMQHLLNDETDPFNRKPLSVDMLQPQVELKARIDAYLAK 863          
BLAST of mRNA_M-pyrifera_M_contig1075.1597.1 vs. uniprot
Match: W7TVR0_9STRA (Ubiquitin conjugation factor e4 b isoform 2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TVR0_9STRA)

HSP 1 Score: 270 bits (691), Expect = 4.040e-84
Identity = 144/269 (53.53%), Postives = 191/269 (71.00%), Query Frame = 0
Query:    1 MNESNSLVAAVMEKLPEVRAVQLQMRDPAQWGAMTETQRNEVSERHSENERSLKSNLSLCNETLHMVTYLTSDPDIQKPFLREELLLRLAEMLLCVLKQLVGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQDDLLPKATSTMRRLQLLPAAAMADMDRLCSAVVEARVVYETSEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTVMDRQGSTIVQHLLNDSNDPFNRQPLTEAMVQPQQELRQRIEDFV 269
            MNE+N+LVA+VMEKLPE+R+VQLQM+D   W AM E  RNE+ ERH++NERS+ S+L LCNET+HM+ YLTSD  ++KPFL   L  RLA  LL ++ +LVG+KGLEIKV+NP++ NF+PKEMLRE+  TI  F+ +P FH  L+ SGYY + +L K   TM+R+  +  A +     L +AV  A    E  +  + EVPDEFLDP+LC +M+DPV LPTSG  M+R  + I QHLLN   DPFNRQPL+   ++P  EL+ +IE +V
Sbjct:  224 MNETNALVASVMEKLPEIRSVQLQMKDSPAWAAMPEESRNEIMERHNDNERSVSSSLLLCNETIHMLMYLTSDEAVRKPFLAPALSPRLANTLLSIVDKLVGTKGLEIKVENPDALNFKPKEMLREVALTILHFAGEPAFHTALSESGYYHEGMLGKVQQTMKRVGGMSEAQLEACTALETAVASAAEKAEAEDLGV-EVPDEFLDPLLCTLMKDPVRLPTSGYAMER--AAIEQHLLNQPTDPFNRQPLSLTDLEPLPELKAKIETWV 489          
BLAST of mRNA_M-pyrifera_M_contig1075.1597.1 vs. uniprot
Match: A0A7S4QYQ6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QYQ6_9STRA)

HSP 1 Score: 278 bits (711), Expect = 1.180e-83
Identity = 145/269 (53.90%), Postives = 190/269 (70.63%), Query Frame = 0
Query:    1 MNESNSLVAAVMEKLPEVRAVQLQMRDPAQWGAMTETQRNEVSERHSENERSLKSNLSLCNETLHMVTYLTSDPDIQKPFLREELLLRLAEMLLCVLKQLVGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQDDLLPKATSTMRRLQLLPAAAMADMDRLCSAVVEARVVYETSEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTVMDRQGSTIVQHLLNDSNDPFNRQPLTEAMVQPQQELRQRIEDFV 269
            MNE+NSL+A+VMEKLPE+R VQ+QM +P QW A+ E QR  ++ RH ENER ++  L LCN+TL M+ YL +D DI+  FL EE+  RL  MLL VL +LVGSKGLE+KVDNPE+YNFRPKEMLR++C   + FS+   F    A SGYY  DL+ K+  T R+L LL   +M   + L   V  A       +A + + PDEFLDP++C  M+DPVLLPTSGTV+DR  STI+QHLLND  DPFNR+PLT  M+ P  EL++++E+++
Sbjct:  601 MNETNSLIASVMEKLPEIRRVQVQMANPQQWAALPEEQRETITSRHEENERDVERALPLCNKTLQMLGYLNTDDDIRNLFLLEEMCSRLVNMLLHVLTKLVGSKGLELKVDNPENYNFRPKEMLRDLCAIFASFSSAHEFQVECAKSGYYNTDLMTKSVKTCRKLNLLTGESMELFESLAEKVKTASKHVGDDDALVADAPDEFLDPLMCTFMKDPVLLPTSGTVIDR--STIMQHLLNDPVDPFNRKPLTVDMIIPATELKEKMENWL 867          
BLAST of mRNA_M-pyrifera_M_contig1075.1597.1 vs. uniprot
Match: A0A7R9Z2J3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z2J3_9STRA)

HSP 1 Score: 258 bits (660), Expect = 4.370e-80
Identity = 137/266 (51.50%), Postives = 183/266 (68.80%), Query Frame = 0
Query:    1 MNESNSLVAAVMEKLPEVRAVQLQMRDPAQWGAMTETQRNEVSERHSENERSLKSNLSLCNETLHMVTYLTSDPDIQKPFLREELLLRLAEMLLCVLKQLVGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQDDLLPKATSTMRRLQLLPAAAMADMDRLCSAVVEARVVYETSEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTVMDRQGSTIVQHLLNDSNDPFNRQPLTEAMVQPQQELRQRIE 266
            MNE+NSL+A+VMEKLPE+R VQ+QM +P +W A++E QR  +S RH ENE  ++  L LCN+TL M+ +L +DPDI+  FL EE+  RL  ML  VL +LVG+KGLE+KVDNPESYNFRPK+MLR++C   + F++   F    A SGYY+ +L+ K+  T +RLQLL   AM +   L   V  A    E  +A   + P+EFLDP++   MRDPV LPTS  V+DR  +TI QHLLND +DPFNR+ LT  MV+   EL++ I+
Sbjct:  172 MNETNSLIASVMEKLPEIRRVQVQMANPQEWAALSEEQRETISSRHEENEEVVRGELPLCNKTLQMLGWLNTDPDIRNLFLLEEMCSRLVNMLFHVLLKLVGTKGLELKVDNPESYNFRPKDMLRDLCAIFANFASADEFVLECAKSGYYEAELVQKSVKTCQRLQLLTGEAMDEFAALTGRVEVASRTVEDFDALTADAPEEFLDPLMYTFMRDPVYLPTSDKVVDR--ATITQHLLNDPHDPFNRKDLTMDMVKDAPELKESID 435          
BLAST of mRNA_M-pyrifera_M_contig1075.1597.1 vs. uniprot
Match: A0A7S2A739_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A739_TRICV)

HSP 1 Score: 263 bits (673), Expect = 4.450e-80
Identity = 140/265 (52.83%), Postives = 183/265 (69.06%), Query Frame = 0
Query:    1 MNESNSLVAAVMEKLPEVRAVQLQMRDPAQWGAMTETQRNEVSERHSENERSLKSNLSLCNETLHMVTYLTSDPDIQKPFLREELLLRLAEMLLCVLKQLVGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQDDLLPKATSTMRRLQLLPAAAMADMDRLCSAVVEARVVYETSEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTVMDRQGSTIVQHLLNDSNDPFNRQPLTEAMVQPQQELRQRI 265
            MNE+NSL+A+VMEKLPE+R VQ+QM +P +W A+ E +R  +S RH ENE S+++ L LCN TL M+ +L +DPDI+  FL EE+  RL  ML  VL +LVGSKGLE+KVDNPESY+FRPK+MLR++C   + F++   F    A SGYY  DL+ K+  T R+L LL   A  +   L S V  A    E  +A   + PDEFLDP++C  MRDPV LPTS +V+DR  +TI QHLLND +DPFNR+ LT  MV+   ELR+R+
Sbjct:  369 MNETNSLIASVMEKLPEIRRVQVQMANPQEWAALGEERRETISGRHEENEESVRTELPLCNRTLQMLGFLNTDPDIRNLFLLEEMCPRLVNMLFHVLTKLVGSKGLELKVDNPESYHFRPKDMLRDLCAVFANFASADEFVLECAKSGYYNADLVQKSVRTCRKLGLLTGTAAEEFASLTSRVEHAARSVEDFDALTADAPDEFLDPLVCTFMRDPVYLPTSDSVVDR--TTIAQHLLNDPHDPFNRKDLTMDMVRDATELRERM 631          
BLAST of mRNA_M-pyrifera_M_contig1075.1597.1 vs. uniprot
Match: A0A4D9D5M9_9STRA (U-box domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5M9_9STRA)

HSP 1 Score: 267 bits (682), Expect = 1.590e-78
Identity = 143/269 (53.16%), Postives = 190/269 (70.63%), Query Frame = 0
Query:    1 MNESNSLVAAVMEKLPEVRAVQLQMRDPAQWGAMTETQRNEVSERHSENERSLKSNLSLCNETLHMVTYLTSDPDIQKPFLREELLLRLAEMLLCVLKQLVGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQDDLLPKATSTMRRLQLLPAAAMADMDRLCSAVVEARVVYETSEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTVMDRQGSTIVQHLLNDSNDPFNRQPLTEAMVQPQQELRQRIEDFV 269
            MNE+N+LVA+VMEKLPE+R+VQLQM+D   W AM E  RNE+ ERH++NERS+ S+L LCNET+HM+ YLTSD  ++KPFL   L  RLA  LL ++ +LVG+KGLEIKV+NP++ NF+ KEMLRE+  TI  F+ +P FH  L+ SGYY + +L K   TM+R+  +  A +     L +AV  A    E  +  + EVPDEFLDP+LC +M+DPV LPTSG  M+R  + I QHLLN   DPFNRQPL+   ++P  EL+ +IE +V
Sbjct:  771 MNETNALVASVMEKLPEIRSVQLQMKDSPAWAAMPEESRNEIMERHNDNERSVSSSLLLCNETIHMLMYLTSDEAVRKPFLAPALSPRLANTLLSIVDKLVGTKGLEIKVENPDALNFKAKEMLREVALTILHFAGEPAFHTALSESGYYHEGMLGKVQQTMKRVGGMSEAQLEACTALETAVAAAAEKAEAEDLGV-EVPDEFLDPLLCTLMKDPVRLPTSGYAMER--AAIEQHLLNQPTDPFNRQPLSLTDLEPLPELKAKIETWV 1036          
BLAST of mRNA_M-pyrifera_M_contig1075.1597.1 vs. uniprot
Match: A0A7S3QFA8_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QFA8_9STRA)

HSP 1 Score: 259 bits (661), Expect = 2.440e-75
Identity = 138/265 (52.08%), Postives = 181/265 (68.30%), Query Frame = 0
Query:    1 MNESNSLVAAVMEKLPEVRAVQLQMRDPAQWGAMTETQRNEVSERHSENERSLKSNLSLCNETLHMVTYLTSDPDIQKPFLREELLLRLAEMLLCVLKQLVGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQDDLLPKATSTMRRLQLLPAAAMADMDRLCSAVVEARVVYETSEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTVMDRQGSTIVQHLLNDSNDPFNRQPLTEAMVQPQQELRQRI 265
            MNE NSL+  VMEKLPE+R VQLQM +P +WGA+ E +R  +S RH ENE+ +K  L LCN+TL M+ +L++D DI+  FL +EL  RL  MLL VL +LVG+KG+E+KVDNPESYNFRPKEML ++C   S ++    F +H A SGYY   L+ KA  T  +L LL    M   + L S V +  +  E  EA   + P+EFLDP++   M+DPV LPTSG ++DR  STI QHLLND NDPFNR+ L+  MV+P  EL++R+
Sbjct:  842 MNEMNSLIVTVMEKLPEIRRVQLQMANPTEWGAVPEEERETISSRHEENEQEVKRALPLCNKTLKMLGFLSTDSDIRSLFLLDELCPRLVNMLLHVLTKLVGAKGMELKVDNPESYNFRPKEMLADLCDIFSSYAGLLVFQEHCAKSGYYTKYLMSKAVKTCSKLNLLSGNEMDVFEELPSKVEKVSLTIENDEALTIDAPNEFLDPLMWTFMKDPVRLPTSGNIIDR--STITQHLLNDPNDPFNRKALSIDMVEPATELKERM 1104          
BLAST of mRNA_M-pyrifera_M_contig1075.1597.1 vs. uniprot
Match: A0A7S1GIE2_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GIE2_CYCTE)

HSP 1 Score: 248 bits (633), Expect = 1.140e-74
Identity = 130/265 (49.06%), Postives = 177/265 (66.79%), Query Frame = 0
Query:    1 MNESNSLVAAVMEKLPEVRAVQLQMRDPAQWGAMTETQRNEVSERHSENERSLKSNLSLCNETLHMVTYLTSDPDIQKPFLREELLLRLAEMLLCVLKQLVGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQDDLLPKATSTMRRLQLLPAAAMADMDRLCSAVVEARVVYETSEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTVMDRQGSTIVQHLLNDSNDPFNRQPLTEAMVQPQQELRQRI 265
            MNE+NSL+A++MEKLP++R  Q+QM +  QWGA+ + QR  ++ R  ENE  +K  L LCN+TL M+ YL +D DI+  FL +E+  RL  MLL VL +LVGSKGLE+KV+NPE YNFRPKEMLR++C   + F+    F    A SGYY  DL+ K+  T R+  LL   +M     L   +  A     + +A L + PDEFLDP++   M+DPVLLPTS T++DR  +TI QHLLND +DPFNR+ LT  M+ P  EL++++
Sbjct:  308 MNETNSLIASIMEKLPQIRQAQVQMANSQQWGALNDEQRETITSRLEENEHEVKRALPLCNKTLQMLGYLNTDQDIRNLFLLQEMCARLVNMLLHVLTKLVGSKGLELKVENPEEYNFRPKEMLRDLCAIFALFANSSDFQTECAKSGYYNLDLVSKSVKTCRKFNLLTGESMDAFSALPDLIEAAVKNVASDDALLTDAPDEFLDPLMFTFMKDPVLLPTSETIIDR--ATITQHLLNDPHDPFNRKELTIEMIVPATELKEKM 570          
BLAST of mRNA_M-pyrifera_M_contig1075.1597.1 vs. uniprot
Match: B8C686_THAPS (U-box domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C686_THAPS)

HSP 1 Score: 244 bits (624), Expect = 1.960e-74
Identity = 131/270 (48.52%), Postives = 178/270 (65.93%), Query Frame = 0
Query:    1 MNESNSLVAAVMEKLPEVRAVQLQMRDPAQWGAMTETQRNEVSERHSENERSLKSNLSLCNETLHMVTYLTSDPDIQKPFLREELLLRLAEMLLCVLKQLVGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYYQDDLLPKATSTMRRLQLLPAAAMADMDRLCSAVVEARVVYETSEASLGEVPDEFLDPVLCHVMRDPVLLPTSGTVMDRQGSTIVQHLLNDSNDPFNRQPLTEAMVQPQQELRQRIEDFVA 270
            +NE NS  A+VME+LP +R VQLQM +P +W A++E  R  ++ RH ENERS+K  L LCN  + M+ +L +D DI+  FL  ++  RLA MLL VL +LVGS+GL++KV+NPE+YNFRPKEML+++C   S F+    F    A SGYY  DL+ K+  T R+L LL   +M     L S V EA  +  + E    + PDEF+DP+L   M DPVLLPTSG ++DR+  TI QHLLNDS DPFNR+ L    V P  EL+ +++ ++A
Sbjct:  202 VNEMNSQFASVMERLPAIRTVQLQMANPQEWAALSEEDRETITSRHEENERSIKQVLPLCNSVMKMLGFLNTDKDIRDMFLLPDMCPRLANMLLHVLTKLVGSRGLDLKVNNPETYNFRPKEMLQDLCVVFSSFAAADEFQVECAKSGYYTPDLMNKSVKTCRKLGLLVGESMELFAELASKVEEASKIMTSDEDLYEDAPDEFMDPLLSEFMNDPVLLPTSGNIVDRK--TITQHLLNDSMDPFNRKELKLEDVVPAVELKAKMDAWLA 469          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1075.1597.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU34_ECTSI8.480e-16389.86U-box domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835Z369_9STRA8.080e-8956.25Ubiquitin elongating factor core-domain-containing... [more]
W7TVR0_9STRA4.040e-8453.53Ubiquitin conjugation factor e4 b isoform 2 n=1 Ta... [more]
A0A7S4QYQ6_9STRA1.180e-8353.90Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7R9Z2J3_9STRA4.370e-8051.50Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2A739_TRICV4.450e-8052.83Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A4D9D5M9_9STRA1.590e-7853.16U-box domain-containing protein n=3 Tax=Monodopsid... [more]
A0A7S3QFA8_9STRA2.440e-7552.08Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
A0A7S1GIE2_CYCTE1.140e-7449.06Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
B8C686_THAPS1.960e-7448.52U-box domain-containing protein n=1 Tax=Thalassios... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003613U box domainSMARTSM00504Ubox_2coord: 203..268
e-value: 1.0E-14
score: 64.9
IPR003613U box domainPFAMPF04564U-boxcoord: 200..271
e-value: 1.8E-22
score: 79.3
IPR003613U box domainPROSITEPS51698U_BOXcoord: 199..275
score: 12.005
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 199..279
e-value: 1.4E-20
score: 75.1
IPR019474Ubiquitin conjugation factor E4, corePFAMPF10408Ufd2P_corecoord: 1..183
e-value: 1.8E-48
score: 165.7
NoneNo IPR availablePANTHERPTHR13931UBIQUITINATION FACTOR E4coord: 1..273
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 189..271

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1075contigM-pyrifera_M_contig1075:19705..23832 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1075.1597.1mRNA_M-pyrifera_M_contig1075.1597.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig1075 19383..29587 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig1075.1597.1 ID=prot_M-pyrifera_M_contig1075.1597.1|Name=mRNA_M-pyrifera_M_contig1075.1597.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=294bp
MNESNSLVAAVMEKLPEVRAVQLQMRDPAQWGAMTETQRNEVSERHSENE
RSLKSNLSLCNETLHMVTYLTSDPDIQKPFLREELLLRLAEMLLCVLKQL
VGSKGLEIKVDNPESYNFRPKEMLREICTTISQFSTQPGFHKHLAMSGYY
QDDLLPKATSTMRRLQLLPAAAMADMDRLCSAVVEARVVYETSEASLGEV
PDEFLDPVLCHVMRDPVLLPTSGTVMDRQGSTIVQHLLNDSNDPFNRQPL
TEAMVQPQQELRQRIEDFVARRVDQAARPTTDESADTPPPTNP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003613Ubox_domain
IPR013083Znf_RING/FYVE/PHD
IPR019474Ub_conjug_fac_E4_core