prot_M-pyrifera_M_contig107227.1553.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig107227.1553.1
Unique Nameprot_M-pyrifera_M_contig107227.1553.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length131
Homology
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BLAST of mRNA_M-pyrifera_M_contig107227.1553.1 vs. uniprot
Match: A0A661GVL5_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661GVL5_9GAMM)

HSP 1 Score: 49.3 bits (116), Expect = 4.270e-5
Identity = 25/39 (64.10%), Postives = 27/39 (69.23%), Query Frame = 0 
Query:    1 RQAAEQGSATAQFNLGSAYSLGTGVTQSDTEAASWYLLA 39
            R  A+QG+ATAQFNLG  Y LG GV   D EA  WYLLA
Sbjct:   52 RDLAQQGNATAQFNLGQLYRLGNGVKADDREALKWYLLA 90
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig107227.1553.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A661GVL5_9GAMM4.270e-564.10Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 109..129
NoneNo IPR availablePANTHERPTHR11102SEL-1-LIKE PROTEINcoord: 2..130
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 1..123
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 9..44
e-value: 1.3E-8
score: 44.6
coord: 81..116
e-value: 2.2E-10
score: 50.5
coord: 45..80
e-value: 8.2E-10
score: 48.6
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 81..116
e-value: 2.4E-10
score: 40.7
coord: 9..44
e-value: 9.6E-8
score: 32.5
coord: 46..80
e-value: 3.1E-7
score: 30.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..130
e-value: 1.1E-47
score: 165.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig107227contigM-pyrifera_M_contig107227:229..621 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig107227.1553.1mRNA_M-pyrifera_M_contig107227.1553.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig107227 229..621 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig107227.1553.1 ID=prot_M-pyrifera_M_contig107227.1553.1|Name=mRNA_M-pyrifera_M_contig107227.1553.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=131bp
RQAAEQGSATAQFNLGSAYSLGTGVTQSDTEAASWYLLAAEQGDPGAQLN
LGNMYYQGRGVERSMEKSTQWYRLSAEQGKPDAQYFLAEAFAEGRGVSQD
FSKAVHWYLRAAQNGDNDAKEDLQKLAEQGV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf