prot_M-pyrifera_M_contig10721.1547.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig10721.1547.1
Unique Name	prot_M-pyrifera_M_contig10721.1547.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	557

Homology

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BLAST of mRNA_M-pyrifera_M_contig10721.1547.1 vs. uniprot
Match: D7FK49_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FK49_ECTSI)

HSP 1 Score: 314 bits (805), Expect = 3.290e-96
Identity = 211/412 (51.21%), Postives = 247/412 (59.95%), Query Frame = 0

Query:    1 DSAGGEKEETGAVVDEHSDTWAFSWMPAIEDFVEQAAARSDAPREDSGSDASSSDEEGPSRKEKP------RGGPVVSARGSRISRPGNS------------VGDGDASSGDESDSARSGRKRRRTRTCEGAWSQRAPYPPSYNETLLADKSFHNPHASETMATAFGVFRPASFLLDVWADDRPLGAAAXXXXXXXXXXXPAHTGKDGAAAPENANNWDGSESWFYDTVRDRQNRLWADTRVRKGVELARKGQHQAAIDIYTQALGMCPDHGDGLVARGAAFATTGRLRKAMQDLSRAVSLDPHNDNASSYLKETRSRRIERQESRELPIAATAGVGLAGRDGLILPRTEH--NERMEVDAASAGGASMLRGN--------EGNEASKSALRALLQDGAEGDALRKMRALLE 384
            D   G++E+ GA V+EH+DTW FSWMPAIEDFVEQAA   +A +++      SS      R +        RG P  ++R S       S                                              AP PPSYNETLLADKSFHNPHASETMA AFG+ RPASF+LDV  DDRP G AA              T + G A     +     ++WFYDTVRDRQNRLWADTRVRKGVELARKGQHQAAID YTQALGMCPDH DGLVARGAAFATTGRLR+A+QDLSRA+S++P N NASSYLKETR RR+ERQE+RE P A+       G       RT+   N RM ++  SA G +++  +        E +EAS++AL ALL DGAEGDALRKMRALLE
Sbjct:   52 DPPNGDEEDAGASVNEHADTWGFSWMPAIEDFVEQAA---EAQQQNXXXXXESSPLGANYRSDTDXXXXXLRGPPTNTSRSSFCDPTSPSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPRPPSYNETLLADKSFHNPHASETMADAFGILRPASFVLDVGEDDRPWGGAAGVAAAGAKGA----TAEGGEADVTTGHGGSEDQNWFYDTVRDRQNRLWADTRVRKGVELARKGQHQAAIDTYTQALGMCPDHDDGLVARGAAFATTGRLRQAVQDLSRALSVNPQNGNASSYLKETR-RRMERQEARETPGASAT----TGNTTTFESRTDSIVNGRMGLNCVSAAGGAVMPASVMPSAGSTERDEASEAALGALLHDGAEGDALRKMRALLE 451

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BLAST of mRNA_M-pyrifera_M_contig10721.1547.1 vs. uniprot
Match: A0A836CKS1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKS1_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 2.330e-14
Identity = 58/157 (36.94%), Postives = 69/157 (43.95%), Query Frame = 0

Query:  144 MATAFGVFRPASFLLDVWADDRPLGAAAXXXXXXXXXXXPAHTGKDGAAAPENANNWDGSESWFYDTVRDRQNRLWADTRVRKGVELARKGQHQAAIDIYTQALGMCPDHGDGLVARGAAFATTGRLRKAMQDLSRAVSLDPHNDNASSYLKETRSR 300
            MA+AF V RP SF +DV AD    GA                                G+  WF++ +R+RQ+R WADTRV KG ELAR GQH AAI  Y QALGMC  H D +                         LDP   NA +YL  T +R
Sbjct:    1 MASAFRVCRPLSFAVDVAAD----GA--------------------------------GARDWFFEDLRERQDRTWADTRVAKGAELARSGQHAAAIKYYDQALGMCAGHVDAVXXXXXXXXXXXXXXXXXXXXXXXXXLDPTCANARAYLSATLTR 121

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BLAST of mRNA_M-pyrifera_M_contig10721.1547.1 vs. uniprot
Match: L1I460_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1I460_GUITC)

HSP 1 Score: 66.6 bits (161), Expect = 6.070e-10
Identity = 35/93 (37.63%), Postives = 53/93 (56.99%), Query Frame = 0

Query:  208 YDTVRDRQNRLWADTRVRKGVELARKGQHQAAIDIYTQALGMCPDHGDGLVARGAAFATTGRLRKAMQDLSRAVSLDPHNDNASSYLKETRSR 300
            Y  +R +QN  WA+  VRKG+  A    +  AI  Y  AL +  ++ D  VA GAA+A T +  +A++  S+A+ + P + NA  YL  TRS+
Sbjct:    3 YSELRKKQNVSWANESVRKGIHHAADRNYVMAIKCYQNALELDSENADAYVALGAAYANTSKSHEAIEAFSKALEIQPDHSNAIKYLNATRSK 95

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BLAST of mRNA_M-pyrifera_M_contig10721.1547.1 vs. uniprot
Match: D3B116_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B116_POLPP)

HSP 1 Score: 58.2 bits (139), Expect = 3.120e-5
Identity = 34/102 (33.33%), Postives = 46/102 (45.10%), Query Frame = 0

Query:  208 YDTVRDRQNRLWADTRVRKGVELARKGQHQAAIDIYTQALGMCPDHGDGLVARGAAFATTGRLRKAMQDLSRAVSLDPHNDNASSYLKETRSRRIERQESRE 309
            Y ++RD QN  WA   V KG+E A+KGQ   A+D+Y  AL    DH D  VA G                     L P++ NA  Y   T  R+++  +  E
Sbjct:  302 YKSLRDHQNYEWARDMVVKGIEYAKKGQFDRALDLYYSALEADKDHSDAYVALGXXXXXXXXXXXXXXXXXXXXXLVPNDKNAEKYYNATLQRKLQEDKIEE 403

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig10721.1547.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig10721.1547.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
D7FK49_ECTSI	3.290e-96	51.21	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A836CKS1_9STRA	2.330e-14	36.94	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
L1I460_GUITC	6.070e-10	37.63	Uncharacterized protein (Fragment) n=1 Tax=Guillar...	[more]
D3B116_POLPP	3.120e-5	33.33	Uncharacterized protein n=1 Tax=Polysphondylium pa...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 376..396
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 220..253 e-value: 0.011 score: 25.0 coord: 254..287 e-value: 0.078 score: 22.1
IPR019734	Tetratricopeptide repeat	PFAM	PF13181	TPR_8	coord: 222..253 e-value: 0.049 score: 13.9
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 220..253 score: 8.614
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 254..287 score: 10.03
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 209..300 e-value: 1.4E-14 score: 55.7
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 219..291
IPR039190	Tetratricopeptide repeat protein 14	PANTHER	PTHR23184	FAMILY NOT NAMED	coord: 124..502
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 220..287 score: 17.21

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig10721	contig	M-pyrifera_M_contig10721:5229..9600 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig10721.1547.1	mRNA_M-pyrifera_M_contig10721.1547.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig10721 5229..9600 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig10721.1547.1 ID=prot_M-pyrifera_M_contig10721.1547.1|Name=mRNA_M-pyrifera_M_contig10721.1547.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=557bp
DSAGGEKEETGAVVDEHSDTWAFSWMPAIEDFVEQAAARSDAPREDSGSD
ASSSDEEGPSRKEKPRGGPVVSARGSRISRPGNSVGDGDASSGDESDSAR
SGRKRRRTRTCEGAWSQRAPYPPSYNETLLADKSFHNPHASETMATAFGV
FRPASFLLDVWADDRPLGAAAAAAAAAAAAAAPAHTGKDGAAAPENANNW
DGSESWFYDTVRDRQNRLWADTRVRKGVELARKGQHQAAIDIYTQALGMC
PDHGDGLVARGAAFATTGRLRKAMQDLSRAVSLDPHNDNASSYLKETRSR
RIERQESRELPIAATAGVGLAGRDGLILPRTEHNERMEVDAASAGGASML
RGNEGNEASKSALRALLQDGAEGDALRKMRALLEEDERKRKRERKSSGAS
GRGEGKGDADEDGGGGGGKKKSRKKEKKSKSKRRSSSRHKRHRERGKDQR
QRRQSAGGGGGDSRFDSGGSSSSSSSSGTEDVGSRSKKKKKRRKHRKRSR
ARSMSPSAFSASGSRNAGGLRGTLAASSAAYSAVAEGSEADDPHPILQRK
KHSLWG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019734	TPR_repeat
IPR011990	TPR-like_helical_dom_sf
IPR039190	TTC14
IPR013026	TPR-contain_dom