prot_M-pyrifera_M_contig106797.1458.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig106797.1458.1
Unique Nameprot_M-pyrifera_M_contig106797.1458.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length121
Homology
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BLAST of mRNA_M-pyrifera_M_contig106797.1458.1 vs. uniprot
Match: A0A7S4E0C0_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4E0C0_9EUKA)

HSP 1 Score: 50.8 bits (120), Expect = 7.690e-5
Identity = 39/121 (32.23%), Postives = 52/121 (42.98%), Query Frame = 0 
Query:    5 DGVGTLEYTIAERGKEELADKW----EDARVSGSRRPQELVVRVKLPDGVNVQSLDVDSGRRFLLIQQEVEXXXXXXXXXXXXKSYSPLLHLRKLPYPIHHEKTKCKWKKATRTLVFTLQV 121
            DG    EYTI ERG +    +     E   V G+RRPQ LVVR+K+P   N + +D+D   + L    E                  P      LPYP+  +    K+KK    LV TL +
Sbjct:  304 DGKLKPEYTITERGSQAADQRLQFTSERFEVLGARRPQNLVVRIKIPQVKNTKDMDLDIDEKRLKFHAE------------------PYALDILLPYPVLPDNGSAKYKKICTMLVVTLPI 406
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106797.1458.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S4E0C0_9EUKA7.690e-532.23Hypothetical protein n=2 Tax=Lotharella globosa Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041442PIH1D1/2/3, CS-like domainPFAMPF18201PIH1_CScoord: 10..121
e-value: 4.7E-11
score: 43.0
NoneNo IPR availablePANTHERPTHR22997UNCHARACTERIZEDcoord: 11..121
NoneNo IPR availablePANTHERPTHR22997:SF3PROTEIN KINTOUNcoord: 11..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig106797contigM-pyrifera_M_contig106797:253..615 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig106797.1458.1mRNA_M-pyrifera_M_contig106797.1458.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig106797 253..615 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig106797.1458.1 ID=prot_M-pyrifera_M_contig106797.1458.1|Name=mRNA_M-pyrifera_M_contig106797.1458.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=121bp
MRPGDGVGTLEYTIAERGKEELADKWEDARVSGSRRPQELVVRVKLPDGV
NVQSLDVDSGRRFLLIQQEVEGGKKEGGGEEEKKSYSPLLHLRKLPYPIH
HEKTKCKWKKATRTLVFTLQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041442PIH1D1/2/3_CS-like