prot_M-pyrifera_M_contig106700.1444.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig106700.1444.1
Unique Nameprot_M-pyrifera_M_contig106700.1444.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length208
Homology
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BLAST of mRNA_M-pyrifera_M_contig106700.1444.1 vs. uniprot
Match: A0A2E7KCS2_9PLAN (Uncharacterized protein n=5 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KCS2_9PLAN)

HSP 1 Score: 80.5 bits (197), Expect = 4.350e-14
Identity = 40/42 (95.24%), Postives = 42/42 (100.00%), Query Frame = 0 
Query:    1 LLHLYAKAFARSGDGNKAVEVAQQIANLDLREKTLISIPGQI 42
            LLHLYAKAFARSGDGNKAVEVAQQIANLDLRE+TLISIPG+I
Sbjct:  228 LLHLYAKAFARSGDGNKAVEVAQQIANLDLREETLISIPGEI 269
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BLAST of mRNA_M-pyrifera_M_contig106700.1444.1 vs. uniprot
Match: A0A517V650_9PLAN (Uncharacterized protein n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517V650_9PLAN)

HSP 1 Score: 73.9 bits (180), Expect = 7.750e-12
Identity = 37/41 (90.24%), Postives = 39/41 (95.12%), Query Frame = 0 
Query:    2 LHLYAKAFARSGDGNKAVEVAQQIANLDLREKTLISIPGQI 42
            LHLYAKAFARSGD NKAVEVAQQIANLDLRE+T+ISI GQI
Sbjct:  211 LHLYAKAFARSGDSNKAVEVAQQIANLDLREETIISISGQI 251
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BLAST of mRNA_M-pyrifera_M_contig106700.1444.1 vs. uniprot
Match: A0A355GDR1_9PLAN (Uncharacterized protein n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A355GDR1_9PLAN)

HSP 1 Score: 71.6 bits (174), Expect = 4.780e-11
Identity = 35/43 (81.40%), Postives = 41/43 (95.35%), Query Frame = 0 
Query:    1 LLHLYAKAFARSGDGNKAVEVAQQIANLDLREKTLISIPGQIA 43
            LL+LY+KAFARSGD +KAVE+AQQI NLDLRE+T+ISIPGQIA
Sbjct:  206 LLYLYSKAFARSGDSDKAVEMAQQIMNLDLREETMISIPGQIA 248
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106700.1444.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2E7KCS2_9PLAN4.350e-1495.24Uncharacterized protein n=5 Tax=Gimesia TaxID=1649... [more]
A0A517V650_9PLAN7.750e-1290.24Uncharacterized protein n=1 Tax=Gimesia algae TaxI... [more]
A0A355GDR1_9PLAN4.780e-1181.40Uncharacterized protein n=2 Tax=Planctomycetaceae ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 126..207
e-value: 2.2E-13
score: 52.2
coord: 1..78
e-value: 1.4E-10
score: 42.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig106700contigM-pyrifera_M_contig106700:1..624 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig106700.1444.1mRNA_M-pyrifera_M_contig106700.1444.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig106700 1..624 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig106700.1444.1 ID=prot_M-pyrifera_M_contig106700.1444.1|Name=mRNA_M-pyrifera_M_contig106700.1444.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=208bp
LLHLYAKAFARSGDGNKAVEVAQQIANLDLREKTLISIPGQIAKTGDVKQ
ALNFVETIPDRNSQSQALRQVTLVLARSNACNLALSLTEQITNEEIRFQA
LEGIVLELAKAGRGKQALDVVRQILFLHRRPWFLRALAKSLVGTGHLNQA
LEVAPLIEGSGEQSTYLMEVAIAVAEQGKSKQALEVVQQIPQRETKENAL
AKVASALL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf