prot_M-pyrifera_M_contig106630.1432.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig106630.1432.1
Unique Nameprot_M-pyrifera_M_contig106630.1432.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length159
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig106630.1432.1 vs. uniprot
Match: UPI000A2A8BC6 (structural maintenance of chromosomes protein 5 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A8BC6)

HSP 1 Score: 55.5 bits (132), Expect = 5.990e-6
Identity = 43/160 (26.88%), Postives = 77/160 (48.12%), Query Frame = 0 
Query:    1 MEVNIADQYHRDCVSMQTPRYSQFGFVAQTESDRKK-LCSTFERQHLRVSVMGVDSVRESVSQH-PNVADHLMQKYRL-TWLDETFEAPPAVMKALHANASMARPVIGDRGLTTTVSECVAETGLEQLYTPESKYTSRKSRFGNQNRSTMVVPLAHSKTF 157
            ++VN+ D  +   +           FV +T  D    L    ++Q+L+V+  GV    E +S   P  +   ++K+    ++ + F AP AVMK L  N  +    +G         + + E+GL   +TP S+YT ++S++GN+ RST V  +  ++ F
Sbjct:  479 LQVNMLDVNNAKYLERLISNNDLRSFVFETREDMNLFLHEVRDKQNLKVN--GVTPPPEPLSHFKPTRSIDDLKKWGFHCYIKDMFTAPDAVMKYLCENYRVHDIPLGSDYTAKNAEKVINESGLTNFFTPSSRYTVKRSKYGNRERSTRVDHIGDARFF 636
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106630.1432.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI000A2A8BC65.990e-626.88structural maintenance of chromosomes protein 5 n=... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027131Structural maintenance of chromosomes protein 5PANTHERPTHR45916FAMILY NOT NAMEDcoord: 1..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig106630contigM-pyrifera_M_contig106630:26..502 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig106630.1432.1mRNA_M-pyrifera_M_contig106630.1432.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig106630 5..502 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig106630.1432.1 ID=prot_M-pyrifera_M_contig106630.1432.1|Name=mRNA_M-pyrifera_M_contig106630.1432.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=159bp
MEVNIADQYHRDCVSMQTPRYSQFGFVAQTESDRKKLCSTFERQHLRVSV
MGVDSVRESVSQHPNVADHLMQKYRLTWLDETFEAPPAVMKALHANASMA
RPVIGDRGLTTTVSECVAETGLEQLYTPESKYTSRKSRFGNQNRSTMVVP
LAHSKTFIG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027131SMC5