prot_M-pyrifera_M_contig106556.1420.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig106556.1420.1
Unique Nameprot_M-pyrifera_M_contig106556.1420.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length76
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig106556.1420.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.40.770coord: 1..75
e-value: 2.6E-6
score: 29.6
NoneNo IPR availablePANTHERPTHR11306:SF28PHOSPHATIDYLGLYCEROL/PHOSPHATIDYLINOSITOL TRANSFER PROTEIN 1-RELATEDcoord: 5..71
IPR003172MD-2-related lipid-recognition domainPFAMPF02221E1_DerP2_DerF2coord: 2..72
e-value: 4.8E-8
score: 33.5
IPR039670Sterol transport protein NPC2-likePANTHERPTHR11306NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATEDcoord: 5..71
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 2..73

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig106556contigM-pyrifera_M_contig106556:2..229 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig106556.1420.1mRNA_M-pyrifera_M_contig106556.1420.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig106556 2..229 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig106556.1420.1 ID=prot_M-pyrifera_M_contig106556.1420.1|Name=mRNA_M-pyrifera_M_contig106556.1420.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=76bp
VSVLGIPVINKNMDICTISPAVTCPIKKNPKWELDVVELIPSIVPAGTYD
ATANITDQHSNIVACASVKLKIVSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003172ML_dom
IPR039670NPC2-like
IPR014756Ig_E-set