prot_M-pyrifera_M_contig105440.1162.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig105440.1162.1
Unique Nameprot_M-pyrifera_M_contig105440.1162.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length209
Homology
BLAST of mRNA_M-pyrifera_M_contig105440.1162.1 vs. uniprot
Match: UPI0011762C3E (DNA polymerase theta n=1 Tax=Myripristis murdjan TaxID=586833 RepID=UPI0011762C3E)

HSP 1 Score: 174 bits (442), Expect = 9.780e-47
Identity = 96/219 (43.84%), Postives = 148/219 (67.58%), Query Frame = 0
Query:    1 KRALLIVPFVSLVMEKERFLEKVFNESIGITVEGSYANSASNRGYDDEVANVSICTIEKANAYVNKAIEEGTVGGIGIVVVDEIHMLAEGGRGALLQQLITKLRLVA---------GDSLQIVGLSATLPILDVIASWLDACAYQTDFRPVELTEYVVIGSQVYDRDLSTVVKTLPDAS-PSDIDLMLTLSLEVLEEGHSALVFCGSKHYAEQTCASLA 209
            ++AL I+PFVS+  EK  +L+ VF E+ G+ VEG   ++++  G+     +V++CTIEKAN+ +N+ IEE ++G +G+VVVDE+HM+ + GRG LL+ L+TK+R +A          +S+Q+VG+SATLP L ++A WLDA  YQTD+RPV L E++ +G+ +YD  LS V +  P      D D +++L  E + EGHS L+FC SK++ E+   S+A
Sbjct:  395 RKALFILPFVSVAKEKMHYLQSVFEEA-GVRVEGYMGSTSAAGGFT--ALDVAVCTIEKANSLINRLIEEDSMGLLGMVVVDELHMVGDSGRGYLLELLLTKIRYIAQKQNTTGSLSESVQVVGMSATLPNLSLLAGWLDAELYQTDYRPVPLQEHLKVGNNIYDSSLSLVRQFTPALQVKGDDDHIVSLCYETVSEGHSVLLFCPSKNWCEKLADSIA 610          
BLAST of mRNA_M-pyrifera_M_contig105440.1162.1 vs. uniprot
Match: A0A8C5FX72_GADMO (DNA-directed DNA polymerase n=1 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5FX72_GADMO)

HSP 1 Score: 174 bits (441), Expect = 1.310e-46
Identity = 99/214 (46.26%), Postives = 144/214 (67.29%), Query Frame = 0
Query:    1 KRALLIVPFVSLVMEKERFLEKVFNESIGITVEGSYANSASNRGYDDEVANVSICTIEKANAYVNKAIEEGTVGGIGIVVVDEIHMLAEGGRGALLQQLITKLRLVA----GDSLQIVGLSATLPILDVIASWLDACAYQTDFRPVELTEYVVIGSQVYDRDLSTVVKTLPDAS-PSDIDLMLTLSLEVLEEGHSALVFCGSKHYAEQTCASLA 209
            ++AL I+PFVS+  EK  +L+ VF E+ G+ VEG    +++  G+     +V++CTIEKAN+ VN+ IEE ++  +G+VVVDE+HM+ + GRG LL+ L+TK+R +A     D +QI+G+SATLP L ++A WL A  YQTDFRPV L E V +GS +YD  LS V K  P  +   D D +++LS E + +GHS L+FC SK + E+   S+A
Sbjct:  123 RKALFILPFVSVAKEKMHYLQSVFEEA-GVRVEGYMGGTSAPGGF--RALDVAVCTIEKANSLVNRLIEEDSMDLLGMVVVDELHMVGDSGRGYLLELLLTKIRFIALHSFSDGVQIIGMSATLPNLALLAGWLGAELYQTDFRPVPLQELVKVGSNIYDNTLSLVRKFSPAINVKGDDDHIVSLSYETVRDGHSVLLFCPSKIWCEKLADSIA 333          
BLAST of mRNA_M-pyrifera_M_contig105440.1162.1 vs. uniprot
Match: A0A667YA76_9TELE (DNA-directed DNA polymerase n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667YA76_9TELE)

HSP 1 Score: 174 bits (440), Expect = 1.770e-46
Identity = 96/221 (43.44%), Postives = 148/221 (66.97%), Query Frame = 0
Query:    1 KRALLIVPFVSLVMEKERFLEKVFNESIGITVEGSYANSASNRGYDDEVANVSICTIEKANAYVNKAIEEGTVGGIGIVVVDEIHMLAEGGRGALLQQLITKLRLVA-----------GDSLQIVGLSATLPILDVIASWLDACAYQTDFRPVELTEYVVIGSQVYDRDLSTVVKTLPDAS-PSDIDLMLTLSLEVLEEGHSALVFCGSKHYAEQTCASLA 209
            ++AL I+PFVS+  EK  +L+ VF E+ G+ VEG   ++++  G+     +V++CTIEKAN+ +N+ IEE ++G +G+VVVDE+HM+ + GRG LL+ L+TK+R +A            +S+Q+VG+SATLP L ++A WLDA  YQTD+RPV L E++ +G+ +YD  LS V +  P      D D +++L  E + EGHS L+FC SK++ E+   S+A
Sbjct:  176 RKALFILPFVSVAKEKMHYLQSVFEEA-GVRVEGYMGSTSAAGGFT--ALDVAVCTIEKANSLINRLIEEDSMGLLGMVVVDELHMVGDSGRGYLLELLLTKIRYIAQKQNTTGSVSLSESVQVVGMSATLPNLSLLAGWLDAELYQTDYRPVPLQEHLKVGNNIYDSSLSLVRQFTPALQVKGDDDHIVSLCYETVSEGHSVLLFCPSKNWCEKLADSIA 393          
BLAST of mRNA_M-pyrifera_M_contig105440.1162.1 vs. uniprot
Match: A0A4W6BKC6_LATCA (DNA-directed DNA polymerase n=1 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6BKC6_LATCA)

HSP 1 Score: 174 bits (440), Expect = 1.780e-46
Identity = 96/216 (44.44%), Postives = 147/216 (68.06%), Query Frame = 0
Query:    1 KRALLIVPFVSLVMEKERFLEKVFNESIGITVEGSYANSASNRGYDDEVANVSICTIEKANAYVNKAIEEGTVGGIGIVVVDEIHMLAEGGRGALLQQLITKLRLVA------GDSLQIVGLSATLPILDVIASWLDACAYQTDFRPVELTEYVVIGSQVYDRDLSTVVKTLPDAS-PSDIDLMLTLSLEVLEEGHSALVFCGSKHYAEQTCASLA 209
            ++AL I+PFVS+  EK  +L+ VF E+ G+ VEG   ++++  G+     +V++CTIEKAN+ +N+ IEE ++G +G+VVVDE+HM+ + GRG LL+ L+TK+R +A      G  +QI+G+SATLP L ++ASWL A  YQTD+RPV L E++ +G  +YD+ LS V +  P      D D +++L  E + EGHS L+FC SK++ E+   S+A
Sbjct:  242 RKALFILPFVSVAKEKMHYLQSVFEEA-GVRVEGYMGSTSAAGGFT--ALDVAVCTIEKANSLINRLIEEDSMGLLGMVVVDELHMVGDSGRGYLLELLLTKIRYIAQKQNVTGSGVQIIGMSATLPNLSLLASWLGAELYQTDYRPVPLQEHLKVGCNIYDKCLSVVRQFAPALHIKGDDDHIVSLCYETVREGHSVLLFCPSKNWCEKLADSIA 454          
BLAST of mRNA_M-pyrifera_M_contig105440.1162.1 vs. uniprot
Match: A0A667YDA4_9TELE (DNA-directed DNA polymerase n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667YDA4_9TELE)

HSP 1 Score: 174 bits (440), Expect = 1.780e-46
Identity = 96/221 (43.44%), Postives = 148/221 (66.97%), Query Frame = 0
Query:    1 KRALLIVPFVSLVMEKERFLEKVFNESIGITVEGSYANSASNRGYDDEVANVSICTIEKANAYVNKAIEEGTVGGIGIVVVDEIHMLAEGGRGALLQQLITKLRLVA-----------GDSLQIVGLSATLPILDVIASWLDACAYQTDFRPVELTEYVVIGSQVYDRDLSTVVKTLPDAS-PSDIDLMLTLSLEVLEEGHSALVFCGSKHYAEQTCASLA 209
            ++AL I+PFVS+  EK  +L+ VF E+ G+ VEG   ++++  G+     +V++CTIEKAN+ +N+ IEE ++G +G+VVVDE+HM+ + GRG LL+ L+TK+R +A            +S+Q+VG+SATLP L ++A WLDA  YQTD+RPV L E++ +G+ +YD  LS V +  P      D D +++L  E + EGHS L+FC SK++ E+   S+A
Sbjct:  139 RKALFILPFVSVAKEKMHYLQSVFEEA-GVRVEGYMGSTSAAGGFT--ALDVAVCTIEKANSLINRLIEEDSMGLLGMVVVDELHMVGDSGRGYLLELLLTKIRYIAQKQNTTGSVSLSESVQVVGMSATLPNLSLLAGWLDAELYQTDYRPVPLQEHLKVGNNIYDSSLSLVRQFTPALQVKGDDDHIVSLCYETVSEGHSVLLFCPSKNWCEKLADSIA 356          
BLAST of mRNA_M-pyrifera_M_contig105440.1162.1 vs. uniprot
Match: UPI001CDBE39B (DNA polymerase theta isoform X1 n=5 Tax=Gambusia affinis TaxID=33528 RepID=UPI001CDBE39B)

HSP 1 Score: 173 bits (439), Expect = 2.460e-46
Identity = 95/219 (43.38%), Postives = 148/219 (67.58%), Query Frame = 0
Query:    1 KRALLIVPFVSLVMEKERFLEKVFNESIGITVEGSYANSASNRGYDDEVANVSICTIEKANAYVNKAIEEGTVGGIGIVVVDEIHMLAEGGRGALLQQLITKLRLVA---------GDSLQIVGLSATLPILDVIASWLDACAYQTDFRPVELTEYVVIGSQVYDRDLSTVVKTLPDAS-PSDIDLMLTLSLEVLEEGHSALVFCGSKHYAEQTCASLA 209
            ++AL I+PFVS+  EK  +L+ VF E+ GI VEG   ++++  G+     +V++CTIEKAN+ +N+ IEE ++G +G+VVVDE+HM+ + GRG LL+ L+TK+R +A          + +QI+G+SATLP L ++ASWL A  YQTD+RPV L E++ +G  +YD+ LS V +  P  +   D D +++L  E + EGHS L+FC SK++ E+   ++A
Sbjct:  368 RKALFILPFVSVAKEKMHYLQSVFEEA-GIRVEGYMGSTSAAGGF--ATLDVAVCTIEKANSLINRLIEENSMGLLGMVVVDELHMVGDSGRGYLLELLLTKIRYIAQKQNTSGSLSEGVQIIGMSATLPNLSLLASWLSADLYQTDYRPVPLQEHLKVGCNIYDKSLSVVRQFAPALNIKGDDDHIVSLCYETVNEGHSVLLFCPSKNWCEKLADTIA 583          
BLAST of mRNA_M-pyrifera_M_contig105440.1162.1 vs. uniprot
Match: A0A315WA91_GAMAF (DNA-directed DNA polymerase (Fragment) n=7 Tax=Poeciliinae TaxID=586240 RepID=A0A315WA91_GAMAF)

HSP 1 Score: 173 bits (439), Expect = 2.460e-46
Identity = 95/219 (43.38%), Postives = 148/219 (67.58%), Query Frame = 0
Query:    1 KRALLIVPFVSLVMEKERFLEKVFNESIGITVEGSYANSASNRGYDDEVANVSICTIEKANAYVNKAIEEGTVGGIGIVVVDEIHMLAEGGRGALLQQLITKLRLVA---------GDSLQIVGLSATLPILDVIASWLDACAYQTDFRPVELTEYVVIGSQVYDRDLSTVVKTLPDAS-PSDIDLMLTLSLEVLEEGHSALVFCGSKHYAEQTCASLA 209
            ++AL I+PFVS+  EK  +L+ VF E+ GI VEG   ++++  G+     +V++CTIEKAN+ +N+ IEE ++G +G+VVVDE+HM+ + GRG LL+ L+TK+R +A          + +QI+G+SATLP L ++ASWL A  YQTD+RPV L E++ +G  +YD+ LS V +  P  +   D D +++L  E + EGHS L+FC SK++ E+   ++A
Sbjct:  368 RKALFILPFVSVAKEKMHYLQSVFEEA-GIRVEGYMGSTSAAGGFT--TLDVAVCTIEKANSLINRLIEENSMGLLGMVVVDELHMVGDSGRGYLLELLLTKIRYIAQKQNTSGSLSEGVQIIGMSATLPNLSLLASWLSADLYQTDYRPVPLQEHLKVGCNIYDKSLSVVRQFAPALNIKGDDDHIVSLCYETVNEGHSVLLFCPSKNWCEKLADTIA 583          
BLAST of mRNA_M-pyrifera_M_contig105440.1162.1 vs. uniprot
Match: UPI001885AD34 (DNA polymerase theta isoform X1 n=2 Tax=Syngnathus acus TaxID=161584 RepID=UPI001885AD34)

HSP 1 Score: 173 bits (438), Expect = 3.340e-46
Identity = 97/220 (44.09%), Postives = 150/220 (68.18%), Query Frame = 0
Query:    1 KRALLIVPFVSLVMEKERFLEKVFNESIGITVEGSYANSASNRGYDDEVANVSICTIEKANAYVNKAIEEGTVGGIGIVVVDEIHMLAEGGRGALLQQLITKLRLVA---------GDSLQIVGLSATLPILDVIASWLDACAYQTDFRPVELTEYVVIGSQVYDRDLSTVVKTLPDASPS--DIDLMLTLSLEVLEEGHSALVFCGSKHYAEQTCASLA 209
            ++ALLI+PFVS+  EK  +L+ VF E+ G+ V+G   ++++  G+     +V++CTIEKAN+ +N+ IEEG +  +G+VVVDE+HM+ + GRG LL+ L+TK+R VA          + +QIVG+SATLP L ++A+WL A  YQTD+RPV L E++ +G  +YD+ L TVV+    A P+  D + +++L  E + EGHS L+FC SK++ E+   S+A
Sbjct:  304 RKALLILPFVSVAKEKMHYLQSVFQEA-GVRVDGFMGSTSAAGGF--AAVDVAVCTIEKANSLINRLIEEGNMALLGMVVVDELHMVGDSGRGYLLELLLTKIRYVAQKLNSAGSLSEGVQIVGMSATLPNLSLLANWLGAELYQTDYRPVPLQEHLKVGCNIYDKSL-TVVRKFTPALPTKGDDEHIISLCYETVREGHSVLLFCPSKNWCEKLADSIA 519          
BLAST of mRNA_M-pyrifera_M_contig105440.1162.1 vs. uniprot
Match: A0A3P9NJ30_POERE (DNA-directed DNA polymerase n=17 Tax=Poecilia TaxID=8080 RepID=A0A3P9NJ30_POERE)

HSP 1 Score: 172 bits (437), Expect = 4.560e-46
Identity = 96/219 (43.84%), Postives = 148/219 (67.58%), Query Frame = 0
Query:    1 KRALLIVPFVSLVMEKERFLEKVFNESIGITVEGSYANSASNRGYDDEVANVSICTIEKANAYVNKAIEEGTVGGIGIVVVDEIHMLAEGGRGALLQQLITKLRLVA---------GDSLQIVGLSATLPILDVIASWLDACAYQTDFRPVELTEYVVIGSQVYDRDLSTVVKTLPDAS-PSDIDLMLTLSLEVLEEGHSALVFCGSKHYAEQTCASLA 209
            ++AL IVPFVS+  EK  +L+ VF E+ GI VEG   ++++  G+     +V++CTIEKAN+ +N+ IEE ++  +G+VVVDE+HM+ + GRG LL+ L+TK+R +A          + +QI+G+SATLP L ++ASWL A  YQTD+RPV L E++ +G  +YD+ LS V +  P  S   D D +++L  E ++EGHS L+FC SK++ E+   ++A
Sbjct:  370 RKALFIVPFVSVAKEKMHYLQSVFEEA-GIRVEGYMGSTSAAGGFT--TLDVAVCTIEKANSLINRLIEENSMCLLGMVVVDELHMVGDSGRGYLLELLLTKIRYIAQKQNTSGSLSEGVQIIGMSATLPNLSLLASWLSADLYQTDYRPVPLQEHLKVGCNIYDKSLSVVRQFAPTLSVKGDDDHIVSLCYETVKEGHSVLLFCPSKNWCEKLADTVA 585          
BLAST of mRNA_M-pyrifera_M_contig105440.1162.1 vs. uniprot
Match: UPI001FAD290A (DNA polymerase theta n=1 Tax=Girardinichthys multiradiatus TaxID=208333 RepID=UPI001FAD290A)

HSP 1 Score: 172 bits (437), Expect = 4.570e-46
Identity = 95/219 (43.38%), Postives = 148/219 (67.58%), Query Frame = 0
Query:    1 KRALLIVPFVSLVMEKERFLEKVFNESIGITVEGSYANSASNRGYDDEVANVSICTIEKANAYVNKAIEEGTVGGIGIVVVDEIHMLAEGGRGALLQQLITKLRLVA---------GDSLQIVGLSATLPILDVIASWLDACAYQTDFRPVELTEYVVIGSQVYDRDLSTVVKTLPDAS-PSDIDLMLTLSLEVLEEGHSALVFCGSKHYAEQTCASLA 209
            ++AL I+PFVS+  EK  +L+ VF E  G+ VEG   ++++  G+     +V++CTIEKAN+ +N+ IEE  +G +GIVVVDE+HM+ + GRG LL+ L+TK+R +A         G+ +QI+G+SATLP L ++ASWL A  YQTD+RPV L E++ +G  +Y++ LS V + +P  +   D D +++L  E + EGHS L+FC SK++ E+   ++A
Sbjct:  374 RKALFILPFVSVAKEKMHYLQSVF-EDAGVRVEGYMGSTSAAGGFT--TLDVAVCTIEKANSLINRLIEENNMGLLGIVVVDELHMVGDPGRGYLLELLLTKIRYIAQKQNTSGCLGEGVQIIGMSATLPNLSLLASWLGADLYQTDYRPVPLQEHLKVGCNIYNKSLSVVRQFVPALNIKGDDDHIVSLCYETVREGHSVLLFCPSKNWCEKLVDTIA 589          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105440.1162.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0011762C3E9.780e-4743.84DNA polymerase theta n=1 Tax=Myripristis murdjan T... [more]
A0A8C5FX72_GADMO1.310e-4646.26DNA-directed DNA polymerase n=1 Tax=Gadus morhua T... [more]
A0A667YA76_9TELE1.770e-4643.44DNA-directed DNA polymerase n=1 Tax=Myripristis mu... [more]
A0A4W6BKC6_LATCA1.780e-4644.44DNA-directed DNA polymerase n=1 Tax=Lates calcarif... [more]
A0A667YDA4_9TELE1.780e-4643.44DNA-directed DNA polymerase n=1 Tax=Myripristis mu... [more]
UPI001CDBE39B2.460e-4643.38DNA polymerase theta isoform X1 n=5 Tax=Gambusia a... [more]
A0A315WA91_GAMAF2.460e-4643.38DNA-directed DNA polymerase (Fragment) n=7 Tax=Poe... [more]
UPI001885AD343.340e-4644.09DNA polymerase theta isoform X1 n=2 Tax=Syngnathus... [more]
A0A3P9NJ30_POERE4.560e-4643.84DNA-directed DNA polymerase n=17 Tax=Poecilia TaxI... [more]
UPI001FAD290A4.570e-4643.38DNA polymerase theta n=1 Tax=Girardinichthys multi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 2..143
e-value: 4.0E-34
score: 119.9
NoneNo IPR availableGENE3D3.40.50.300coord: 144..208
e-value: 4.0E-34
score: 119.9
NoneNo IPR availablePANTHERPTHR12131:SF10coord: 1..209
NoneNo IPR availablePANTHERPTHR12131ATP-DEPENDENT RNA AND DNA HELICASEcoord: 1..209
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 2..124
e-value: 1.1E-8
score: 35.1
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 1..138
score: 12.741
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..131
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 135..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig105440contigM-pyrifera_M_contig105440:9..635 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig105440.1162.1mRNA_M-pyrifera_M_contig105440.1162.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig105440 9..635 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig105440.1162.1 ID=prot_M-pyrifera_M_contig105440.1162.1|Name=mRNA_M-pyrifera_M_contig105440.1162.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=209bp
KRALLIVPFVSLVMEKERFLEKVFNESIGITVEGSYANSASNRGYDDEVA
NVSICTIEKANAYVNKAIEEGTVGGIGIVVVDEIHMLAEGGRGALLQQLI
TKLRLVAGDSLQIVGLSATLPILDVIASWLDACAYQTDFRPVELTEYVVI
GSQVYDRDLSTVVKTLPDASPSDIDLMLTLSLEVLEEGHSALVFCGSKHY
AEQTCASLA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011545DEAD/DEAH_box_helicase_dom
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase