prot_M-pyrifera_M_contig105419.1157.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig105419.1157.1
Unique Nameprot_M-pyrifera_M_contig105419.1157.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length171
Homology
BLAST of mRNA_M-pyrifera_M_contig105419.1157.1 vs. uniprot
Match: A0A6B2L247_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L247_9EUKA)

HSP 1 Score: 92.0 bits (227), Expect = 1.350e-18
Identity = 59/164 (35.98%), Postives = 89/164 (54.27%), Query Frame = 0
Query:    8 TFVNIFWTDYNSCNDELYLLAGDENSLTALNVMLYTFDMVDGGVTGVLVDNSEYTISSIHSDPQSCSSSVYAMSPGLVDTPADELVWSLIQIDPRSGSVTDAVAVTEPGMYNAYYGGGVYGNAVCKNQLTHLFQRSSDQVVEGLVIDMSNGSTIWSFMPNVGVN 171
            TFVN FW D++  +   Y+LAGDENSL  LNV+LY  D   G  + V VDN++YT+S+I  D  +    +Y++SPGL         WS++ IDP++G V+    +     + + Y GGVY N +   +LT+ F           +ID+  G   +    N+G+N
Sbjct:  335 TFVNFFWADFDPLSGNTYILAGDENSLYQLNVVLYVVDKT-GKSSVVWVDNTKYTLSNIFVDRTT--GIIYSVSPGLFGMNN----WSIVTIDPKTGGVSFVSKIAGGERFKSEYKGGVY-NGLQNGKLTYSFTWYKTGASLLTLIDIQTGQVQFQTDINLGIN 490          
BLAST of mRNA_M-pyrifera_M_contig105419.1157.1 vs. uniprot
Match: V4B8B8_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4B8B8_LOTGI)

HSP 1 Score: 82.4 bits (202), Expect = 3.330e-15
Identity = 58/174 (33.33%), Postives = 93/174 (53.45%), Query Frame = 0
Query:    2 TPIGEFTFVNIFWTDYNSCNDELYLLAGDENSLTALNVMLYTFDMVDGGVTGV---LVDNSEYTISSIHSDPQSCSSSVYAMSPGLVDT--PADELVWSLIQIDPRSGSVTDAVAVTEPGMYNAYYGGGVYGNAVCKNQ--LTHLFQRSSDQVVEGLVIDMSNGSTIWSFMPNV 168
            TP  E  FVN  W +Y+S N+ +Y+L G+EN+   L+  +YTF +       +    +D S+YT  S+H    S    + A+SPGL  T  PA    +SL++ID  +GSV +   +T PG++  YYGG +  NA+ +    LT  F+ +  +      ID++  +  +S M N+
Sbjct:  348 TPTTENLFVNFQWMEYDSKNNIVYVLLGNENAADTLDARIYTFSVTSSKALFMGYKSLDVSKYTFMSMHY--HSAKGQLLAISPGLFSTKYPA----YSLLKIDVNTGSVQELSKITPPGIFEKYYGGSII-NAIDQQSGILTQAFRVADSEADVVASIDLNKLTVTFSQMTNL 514          
BLAST of mRNA_M-pyrifera_M_contig105419.1157.1 vs. uniprot
Match: UPI001EE58372 (uncharacterized protein LOC124290088 n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EE58372)

HSP 1 Score: 76.3 bits (186), Expect = 4.640e-13
Identity = 54/169 (31.95%), Postives = 90/169 (53.25%), Query Frame = 0
Query:    3 PIGEFTFVNIFWTDYNSCNDELYLLAGDENSLTALNVMLYTFDM-VDGGVTGVLVDNSEYTISSIHSDPQSCSSSVYAMSPGLV-DTPADELVWSLIQIDPRSGSVTDAVAVTEPGMYNAYYGGGVY-GNAVCKNQLTHLFQRSSDQVVEGLVIDMSNGSTIWSFMPNV 168
            P  E T+VN  W +Y+     L++L G+EN    L+  +YTFD+      +   +D S+YT  S+    ++    + A+SPGL  DT      +SLI +DP +G+V D   +T+PG++  YYGG ++ G    K  L H+F+ +  +      I +S+  T +S + N+
Sbjct:  352 PDTEDTYVNFQWAEYDPGRMMLFVLLGNENDADGLSARIYTFDISAKAFKSHADIDVSKYTFMSMQLYTKT--GQLLAVSPGLFKDTYPG---YSLISVDPFTGAVVDLAEITQPGIFEKYYGGTIFNGMDQEKGILYHVFRVADAEADVIATISLSDMKTTFSKITNI 515          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105419.1157.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6B2L247_9EUKA1.350e-1835.98Uncharacterized protein n=1 Tax=Arcella intermedia... [more]
V4B8B8_LOTGI3.330e-1533.33Uncharacterized protein n=1 Tax=Lottia gigantea Ta... [more]
UPI001EE583724.640e-1331.95uncharacterized protein LOC124290088 n=2 Tax=Halio... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37916FAMILY NOT NAMEDcoord: 5..141
NoneNo IPR availablePANTHERPTHR37916:SF2coord: 5..141

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig105419contigM-pyrifera_M_contig105419:6..518 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig105419.1157.1mRNA_M-pyrifera_M_contig105419.1157.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig105419 6..518 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig105419.1157.1 ID=prot_M-pyrifera_M_contig105419.1157.1|Name=mRNA_M-pyrifera_M_contig105419.1157.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=171bp
TTPIGEFTFVNIFWTDYNSCNDELYLLAGDENSLTALNVMLYTFDMVDGG
VTGVLVDNSEYTISSIHSDPQSCSSSVYAMSPGLVDTPADELVWSLIQID
PRSGSVTDAVAVTEPGMYNAYYGGGVYGNAVCKNQLTHLFQRSSDQVVEG
LVIDMSNGSTIWSFMPNVGVN
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