prot_M-pyrifera_M_contig105308.1139.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig105308.1139.1
Unique Nameprot_M-pyrifera_M_contig105308.1139.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length189
Homology
BLAST of mRNA_M-pyrifera_M_contig105308.1139.1 vs. uniprot
Match: A0A060T5P9_BLAAD (ARAD1C14256p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060T5P9_BLAAD)

HSP 1 Score: 168 bits (425), Expect = 5.050e-47
Identity = 90/183 (49.18%), Postives = 116/183 (63.39%), Query Frame = 0
Query:    3 NVATLRLRKQISELQEARGSGTSLISLFLSGGSQVSEYNKLLTQELGTAKCIKSRVVRLAVLEAIRSLQHRLRLLGHKAPPKGLALFCGLIESASKQPRKVLHVIEPLRELGQWRYLCDSTFHVSLLEEQLEDGATYGFVIVDGNGTTCGLLKGARRQTLCSVSVHLPKKHNKGGQSAGRFFR 185
            N+   +++K I  L+ ARG+GTS+ISL +    Q+  YNK+LT E GTA  IKSRV RL+VL AI S Q RL+L  ++ PP GL +FCG + +A  + RKV    EP + +    YLCD+ FH   L E LED A +GF+I+DGNG   G L G  R+ L    V LPKKH +GGQSA RF R
Sbjct:    9 NIEIWKVKKLIKSLEAARGNGTSMISLIIPPNGQLPLYNKMLTDEYGTASNIKSRVNRLSVLSAITSTQQRLKLY-NRTPPNGLVIFCGDVITAEGKERKVNIDFEPFKPINTTLYLCDNKFHTEALSELLEDDAKFGFIIMDGNGALFGTLSGNTREVLHKFQVDLPKKHGRGGQSALRFAR 190          
BLAST of mRNA_M-pyrifera_M_contig105308.1139.1 vs. uniprot
Match: A0A316VJF2_9BASI (Putative eukaryotic translational release factor 1 n=1 Tax=Meira miltonrushii TaxID=1280837 RepID=A0A316VJF2_9BASI)

HSP 1 Score: 167 bits (422), Expect = 1.940e-46
Identity = 89/183 (48.63%), Postives = 118/183 (64.48%), Query Frame = 0
Query:    3 NVATLRLRKQISELQEARGSGTSLISLFLSGGSQVSEYNKLLTQELGTAKCIKSRVVRLAVLEAIRSLQHRLRLLGHKAPPKGLALFCGLIESASKQPRKVLHVIEPLRELGQWRYLCDSTFHVSLLEEQLEDGATYGFVIVDGNGTTCGLLKGARRQTLCSVSVHLPKKHNKGGQSAGRFFR 185
            N+   +++K I  L  ARG+GTS+ISL L   SQ+++ + +LTQE GTA  IKSRV RL+VL AI S Q RL+L   + PP GL ++CG I +   + +KV    EP + +    YLCD+ FH   L E LED A +GF+++DGNGT  G+L G  R  L  +SV LPKKH +GGQSA RF R
Sbjct:   12 NIQIWKIKKLIKSLDSARGAGTSMISLILPPRSQIAQASNMLTQEYGTASNIKSRVNRLSVLAAITSTQQRLKLYT-RVPPNGLVVYCGTILNDEGKEKKVNFSFEPFKPINTSLYLCDNKFHTEALAELLEDDARFGFIVMDGNGTLFGILSGNTRTVLQKLSVDLPKKHGRGGQSALRFSR 193          
BLAST of mRNA_M-pyrifera_M_contig105308.1139.1 vs. uniprot
Match: A0A8J6B0N3_9EUKA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6B0N3_9EUKA)

HSP 1 Score: 165 bits (418), Expect = 7.240e-46
Identity = 86/178 (48.31%), Postives = 117/178 (65.73%), Query Frame = 0
Query:    8 RLRKQISELQEARGSGTSLISLFLSGGSQVSEYNKLLTQELGTAKCIKSRVVRLAVLEAIRSLQHRLRLLGHKAPPKGLALFCGLIESASKQPRKVLHVIEPLRELGQWRYLCDSTFHVSLLEEQLEDGATYGFVIVDGNGTTCGLLKGARRQTLCSVSVHLPKKHNKGGQSAGRFFR 185
            R+RK +  L++A+G+GTS++SL +  G Q+S Y+K+L +E GTA  IKSRV RL+VL AI S Q +L+L   + PP GL ++ G +     + +KV   IEP+R + Q  YLCD+ FH   L E LED   +GF+I+DGNG   G + G+ R  L S SV LPKKH +GGQSA RF R
Sbjct:   14 RVRKLVEHLEQAKGNGTSMVSLIIPAGDQISRYSKMLAEEYGTASNIKSRVNRLSVLAAITSTQQKLKLYT-RVPPNGLVVYSGTVIGDEGKEKKVSMTIEPIRPIKQSLYLCDNKFHTEPLRELLEDDKKFGFIIMDGNGCLYGTVCGSTRTVLHSFSVDLPKKHGRGGQSAVRFSR 190          
BLAST of mRNA_M-pyrifera_M_contig105308.1139.1 vs. uniprot
Match: F4PSE8_CAVFA (eRF1_1 domain-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PSE8_CAVFA)

HSP 1 Score: 166 bits (419), Expect = 1.060e-45
Identity = 86/178 (48.31%), Postives = 118/178 (66.29%), Query Frame = 0
Query:    8 RLRKQISELQEARGSGTSLISLFLSGGSQVSEYNKLLTQELGTAKCIKSRVVRLAVLEAIRSLQHRLRLLGHKAPPKGLALFCGLIESASKQPRKVLHVIEPLRELGQWRYLCDSTFHVSLLEEQLEDGATYGFVIVDGNGTTCGLLKGARRQTLCSVSVHLPKKHNKGGQSAGRFFR 185
            +++K I  L+  RG+GTS+ISL +  G Q+++ NK+L +E GTA  IKSRV RL+VL+AI S Q RL+L  +K P  GL L+CG I +A  + +KV   IEP + +    YLCD+ FH + L E LE    +GF++VDGNG   G+L G+ R  L  ++V LPKKH +GGQSA RF R
Sbjct:   18 KIKKLIKNLESVRGNGTSMISLIIRPGDQIAKINKMLAEEYGTASNIKSRVNRLSVLDAITSTQQRLKLY-NKVPENGLVLYCGTIMTAEGKEKKVTIDIEPFKPINTSLYLCDNKFHTAALGELLESDEKFGFIVVDGNGALFGVLAGSTRTVLHRITVDLPKKHGRGGQSALRFAR 194          
BLAST of mRNA_M-pyrifera_M_contig105308.1139.1 vs. uniprot
Match: A0A1E7F0N8_9STRA (Eukaryotic peptide chain release factor subunit 1 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F0N8_9STRA)

HSP 1 Score: 165 bits (417), Expect = 1.860e-45
Identity = 88/182 (48.35%), Postives = 116/182 (63.74%), Query Frame = 0
Query:    4 VATLRLRKQISELQEARGSGTSLISLFLSGGSQVSEYNKLLTQELGTAKCIKSRVVRLAVLEAIRSLQHRLRLLGHKAPPKGLALFCGLIESASKQPRKVLHVIEPLRELGQWRYLCDSTFHVSLLEEQLEDGATYGFVIVDGNGTTCGLLKGARRQTLCSVSVHLPKKHNKGGQSAGRFFR 185
            +   +++K I  L+ ARG+GTS+ISL +  G Q+S  NK+L+ E GTA  IKSRV RL+VL AI S Q RL+L  +K PP GL L+CG + +   + RKV    EP R +    YLCD+ FH   L E L D   +GF+I+DGNG   G ++G+ R+ L   SV LPKKH +GGQSA RF R
Sbjct:   16 IEMFKVKKLIKNLEAARGNGTSMISLIIPPGDQISRVNKMLSDEYGTASNIKSRVNRLSVLSAITSTQQRLKLY-NKCPPNGLVLYCGTVITEDGKERKVNIDFEPFRSINTSLYLCDNKFHTQDLNELLMDDEAFGFIIMDGNGCLYGTVQGSSREILHKFSVDLPKKHGRGGQSALRFAR 196          
BLAST of mRNA_M-pyrifera_M_contig105308.1139.1 vs. uniprot
Match: A0A316YIG1_9BASI (Peptide chain release factor eRF/aRF subunit 1 n=1 Tax=Acaromyces ingoldii TaxID=215250 RepID=A0A316YIG1_9BASI)

HSP 1 Score: 164 bits (414), Expect = 2.870e-45
Identity = 88/184 (47.83%), Postives = 117/184 (63.59%), Query Frame = 0
Query:    2 SNVATLRLRKQISELQEARGSGTSLISLFLSGGSQVSEYNKLLTQELGTAKCIKSRVVRLAVLEAIRSLQHRLRLLGHKAPPKGLALFCGLIESASKQPRKVLHVIEPLRELGQWRYLCDSTFHVSLLEEQLEDGATYGFVIVDGNGTTCGLLKGARRQTLCSVSVHLPKKHNKGGQSAGRFFR 185
            +N+   +++K I  L  ARG+GTS+ISL L   SQ+S+ + +LTQE GTA  IKSRV RL+VL AI S Q RL+L   + PP GL ++CG I +   + +KV    EP + +    YLCD+ FH   L E LE  A +GF+++DGNG+  G L G  R  L  +SV LPKKH +GGQSA RF R
Sbjct:   11 ANIQIWKVKKLIKSLDNARGAGTSMISLILPPRSQISQTSNMLTQEYGTASNIKSRVNRLSVLGAITSTQQRLKLYT-RVPPNGLVVYCGTILTDEGKEKKVNFSFEPFKPINTSLYLCDNKFHTEALAELLESDAKFGFIVMDGNGSLFGTLSGNTRSVLQKISVDLPKKHGRGGQSALRFSR 193          
BLAST of mRNA_M-pyrifera_M_contig105308.1139.1 vs. uniprot
Match: A0A1A8VPN5_PLAMA (Eukaryotic peptide chain release factor subunit 1 n=53 Tax=Eukaryota TaxID=2759 RepID=A0A1A8VPN5_PLAMA)

HSP 1 Score: 163 bits (413), Expect = 3.240e-45
Identity = 85/184 (46.20%), Postives = 119/184 (64.67%), Query Frame = 0
Query:    2 SNVATLRLRKQISELQEARGSGTSLISLFLSGGSQVSEYNKLLTQELGTAKCIKSRVVRLAVLEAIRSLQHRLRLLGHKAPPKGLALFCGLIESASKQPRKVLHVIEPLRELGQWRYLCDSTFHVSLLEEQLEDGATYGFVIVDGNGTTCGLLKGARRQTLCSVSVHLPKKHNKGGQSAGRFFR 185
            +NV   ++++ I +L+ A+G+GTS+ISL +    +VS  NK+L  ELGTA  IKSRV RL+VL AI S Q +L+L   K PPKGL ++CG + +   + +K+    EP R +    YLCD+ FHV  L+E LE    +GF+IVDGNG   G ++G  R+ +   +V LPKKH +GGQSA RF R
Sbjct:    7 ANVEQWKIKRLIKKLENAKGNGTSMISLIIKNKDEVSRINKMLADELGTASNIKSRVNRLSVLSAITSTQQKLKLYS-KTPPKGLVVYCGTVITEDGKEKKMSIDFEPFRPINTSLYLCDNKFHVEALKELLESDDKFGFIIVDGNGALFGTIQGNTREVIRRFTVDLPKKHGRGGQSALRFAR 189          
BLAST of mRNA_M-pyrifera_M_contig105308.1139.1 vs. uniprot
Match: A0A507FAH5_9FUNG (eRF1_1 domain-containing protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FAH5_9FUNG)

HSP 1 Score: 163 bits (413), Expect = 3.580e-45
Identity = 85/187 (45.45%), Postives = 121/187 (64.71%), Query Frame = 0
Query:    2 SNVATLRLRKQISELQEARGSGTSLISLFLSGGSQVSEYNKLLTQELGTAKCIKSRVVRLAVLEAIRSLQHRLRLLGHKAPPKGLALFCGLIESASKQPRKVLHVIEPLRELGQWRYLCDSTFHVSLLEEQLEDGATYGFVIVDGNGTTCGLLKGARRQTLCSVSVHLPKKHNKGGQSAGRFFRKCV 188
            +N+   +++K I  L++ARG+GTS+ISL L  G+Q+S+  K+L  E GTA  IKSRV RL+VL AI S Q RL+L  +K PP GL ++CG I +A  + ++V    EP + +    Y+CD+ FH   L E +E  + +GF+++DGNGT  G L G  R+ +   +V LPKKH +GGQSA RF R  V
Sbjct:    9 ANIEMWKIKKLIKGLEQARGNGTSMISLILPPGTQISQSAKMLADEYGTASNIKSRVNRLSVLSAITSTQQRLKLY-NKTPPNGLVVYCGTILTAEGKEKQVTIDFEPFKPINTSLYMCDNKFHTEALSELMESDSRFGFIVMDGNGTLFGYLTGNTREIIHKFTVDLPKKHGRGGQSALRFARLRV 194          
BLAST of mRNA_M-pyrifera_M_contig105308.1139.1 vs. uniprot
Match: A0A316UB84_9BASI (Putative eukaryotic translational release factor 1 n=1 Tax=Pseudomicrostroma glucosiphilum TaxID=1684307 RepID=A0A316UB84_9BASI)

HSP 1 Score: 163 bits (413), Expect = 3.940e-45
Identity = 88/183 (48.09%), Postives = 117/183 (63.93%), Query Frame = 0
Query:    3 NVATLRLRKQISELQEARGSGTSLISLFLSGGSQVSEYNKLLTQELGTAKCIKSRVVRLAVLEAIRSLQHRLRLLGHKAPPKGLALFCGLIESASKQPRKVLHVIEPLRELGQWRYLCDSTFHVSLLEEQLEDGATYGFVIVDGNGTTCGLLKGARRQTLCSVSVHLPKKHNKGGQSAGRFFR 185
            N+   +++K +  L  ARG+GTS+ISL +   SQVS+++ +LTQE GTA  IKSRV RL+VL AI S Q RL+L  ++ PP GL ++CG I +   + +KV    EP + +    YLCD+ FH   L E LE  A++GF+I+DGNG   G L G  R  L   SV LPKKH +GGQSA RF R
Sbjct:   11 NIQIWKVKKLVKGLDAARGAGTSMISLIIPPKSQVSQFSNMLTQEYGTASNIKSRVNRLSVLAAITSTQQRLKLY-NRVPPNGLVVYCGTILTDEGKEKKVNISFEPFKPINTSLYLCDNKFHTEALSELLESDASFGFIIMDGNGALFGTLSGNTRNILHKFSVDLPKKHGRGGQSALRFAR 192          
BLAST of mRNA_M-pyrifera_M_contig105308.1139.1 vs. uniprot
Match: A0A066VW68_TILAU (Putative eukaryotic translational release factor 1 n=1 Tax=Tilletiaria anomala (strain ATCC 24038 / CBS 436.72 / UBC 951) TaxID=1037660 RepID=A0A066VW68_TILAU)

HSP 1 Score: 163 bits (413), Expect = 4.260e-45
Identity = 88/184 (47.83%), Postives = 116/184 (63.04%), Query Frame = 0
Query:    2 SNVATLRLRKQISELQEARGSGTSLISLFLSGGSQVSEYNKLLTQELGTAKCIKSRVVRLAVLEAIRSLQHRLRLLGHKAPPKGLALFCGLIESASKQPRKVLHVIEPLRELGQWRYLCDSTFHVSLLEEQLEDGATYGFVIVDGNGTTCGLLKGARRQTLCSVSVHLPKKHNKGGQSAGRFFR 185
            +N+   +++K +  L +ARG+GTS+ISL L   SQ+S+   +LTQE GTA  IKSRV R +VL AI S Q RL+L  +K PP GL ++CG I +   + +KV    EP + +    YLCD+ FH   L E LE  AT+GF+I+DGNG   G + G  R  L   SV LPKKH +GGQSA RF R
Sbjct:   13 ANIQMWKVKKLVQSLDKARGAGTSMISLILPPRSQISQATNMLTQEYGTASNIKSRVNRQSVLSAITSTQQRLKLY-NKVPPNGLIVYCGTILTDDGKEKKVNFSFEPFKPINTSLYLCDNKFHTEALSELLESDATFGFIIMDGNGALYGTVSGNTRTVLHKFSVDLPKKHGRGGQSALRFAR 195          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig105308.1139.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A060T5P9_BLAAD5.050e-4749.18ARAD1C14256p n=1 Tax=Blastobotrys adeninivorans Ta... [more]
A0A316VJF2_9BASI1.940e-4648.63Putative eukaryotic translational release factor 1... [more]
A0A8J6B0N3_9EUKA7.240e-4648.31Eukaryotic peptide chain release factor subunit 1 ... [more]
F4PSE8_CAVFA1.060e-4548.31eRF1_1 domain-containing protein n=1 Tax=Cavenderi... [more]
A0A1E7F0N8_9STRA1.860e-4548.35Eukaryotic peptide chain release factor subunit 1 ... [more]
A0A316YIG1_9BASI2.870e-4547.83Peptide chain release factor eRF/aRF subunit 1 n=1... [more]
A0A1A8VPN5_PLAMA3.240e-4546.20Eukaryotic peptide chain release factor subunit 1 ... [more]
A0A507FAH5_9FUNG3.580e-4545.45eRF1_1 domain-containing protein n=1 Tax=Chytriomy... [more]
A0A316UB84_9BASI3.940e-4548.09Putative eukaryotic translational release factor 1... [more]
A0A066VW68_TILAU4.260e-4547.83Putative eukaryotic translational release factor 1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005140eRF1 domain 1/Pelota-likeSMARTSM01194eRF1_1_2coord: 1..134
e-value: 1.4E-14
score: 64.4
IPR042226eRF1, domain 2 superfamilyGENE3D3.30.420.60coord: 130..188
e-value: 1.0E-17
score: 66.3
IPR024049Peptide Chain Release Factor eRF1/aRF1, N-terminalGENE3D3.30.960.10coord: 1..129
e-value: 7.7E-38
score: 131.3
IPR024049Peptide Chain Release Factor eRF1/aRF1, N-terminalSUPERFAMILY55481N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1coord: 3..135
IPR005141eRF1 domain 2PFAMPF03464eRF1_2coord: 139..185
e-value: 8.4E-11
score: 42.3
IPR004403Peptide chain release factor eRF1/aRF1PANTHERPTHR10113PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1coord: 3..185
NoneNo IPR availablePANTHERPTHR10113:SF10EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1coord: 3..185
NoneNo IPR availableSUPERFAMILY53137Translational machinery componentscoord: 138..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig105308contigM-pyrifera_M_contig105308:7..573 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig105308.1139.1mRNA_M-pyrifera_M_contig105308.1139.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig105308 7..573 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig105308.1139.1 ID=prot_M-pyrifera_M_contig105308.1139.1|Name=mRNA_M-pyrifera_M_contig105308.1139.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=189bp
MSNVATLRLRKQISELQEARGSGTSLISLFLSGGSQVSEYNKLLTQELGT
AKCIKSRVVRLAVLEAIRSLQHRLRLLGHKAPPKGLALFCGLIESASKQP
RKVLHVIEPLRELGQWRYLCDSTFHVSLLEEQLEDGATYGFVIVDGNGTT
CGLLKGARRQTLCSVSVHLPKKHNKGGQSAGRFFRKCV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005140eRF1_1_Pelota
IPR042226eFR1_2_sf
IPR024049Release_factor_eRF1/aRF1_N
IPR005141eRF1_2
IPR004403Peptide_chain-rel_eRF1/aRF1